RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 GJA3Q9Y6H8 435 aa14.57□□□□□ -0.08
NEDD8-204ENST00000526430 CELF2O95319 508 aaKnown RBP14.56□□□□□ -0.08
NEDD8-204ENST00000526430 ALDH1B1P30837 517 aa14.56□□□□□ -0.08
NEDD8-204ENST00000526430 HEG1Q9ULI3 1381 aa14.56□□□□□ -0.08
NEDD8-204ENST00000526430 CLEC4GQ6UXB4 293 aa14.55□□□□□ -0.08
NEDD8-204ENST00000526430 NBPF5PQ86XG9 351 aaPredicted RBP14.55□□□□□ -0.08
NEDD8-204ENST00000526430 ADARB2Q9NS39 739 aaKnown RBP14.55□□□□□ -0.08
NEDD8-204ENST00000526430 DIAPH1O60610 1272 aaKnown RBP14.54□□□□□ -0.08
NEDD8-204ENST00000526430 GRIPAP1Q4V328 841 aa14.54□□□□□ -0.08
NEDD8-204ENST00000526430 CC2D2BQ6DHV5 1058 aa14.54□□□□□ -0.08
NEDD8-204ENST00000526430 TTC5Q8N0Z6 440 aa14.54□□□□□ -0.08
NEDD8-204ENST00000526430 NBPF15Q8N660 670 aa14.54□□□□□ -0.08
NEDD8-204ENST00000526430 PGAP2Q9UHJ9 254 aa14.54□□□□□ -0.08
NEDD8-204ENST00000526430 ZNF330Q9Y3S2 320 aaPredicted RBP14.54□□□□□ -0.08
NEDD8-204ENST00000526430 NUP98P52948 1817 aa14.53□□□□□ -0.08
NEDD8-204ENST00000526430 RGL2O15211 777 aa14.53□□□□□ -0.08
NEDD8-204ENST00000526430 NPM2Q86SE8 214 aaKnown RBP14.53□□□□□ -0.08
NEDD8-204ENST00000526430 ZNF496Q96IT1 587 aaPredicted RBP14.53□□□□□ -0.08
NEDD8-204ENST00000526430 GPRC5DQ9NZD1 345 aa14.53□□□□□ -0.08
NEDD8-204ENST00000526430 ANP32CO43423 234 aa14.52□□□□□ -0.09
NEDD8-204ENST00000526430 DIEXFQ68CQ4 756 aaKnown RBP14.52□□□□□ -0.09
NEDD8-204ENST00000526430 DZIP3Q86Y13 1208 aaKnown RBP14.52□□□□□ -0.09
NEDD8-204ENST00000526430 CDHR2Q9BYE9 1310 aa14.51□□□□□ -0.09
NEDD8-204ENST00000526430 TPTE2Q6XPS3 522 aa14.51□□□□□ -0.09
NEDD8-204ENST00000526430 CTU1Q7Z7A3 348 aaKnown RBP14.51□□□□□ -0.09
NEDD8-204ENST00000526430 ZC3H15Q8WU90 426 aaKnown RBP14.51□□□□□ -0.09
NEDD8-204ENST00000526430 ZIC5Q96T25 663 aa14.51□□□□□ -0.09
NEDD8-204ENST00000526430 ZNF652Q9Y2D9 606 aa14.51□□□□□ -0.09
NEDD8-204ENST00000526430 RBBP6Q7Z6E9 1792 aaKnown RBP14.51□□□□□ -0.09
NEDD8-204ENST00000526430 CRY2Q49AN0 593 aa14.5□□□□□ -0.09
NEDD8-204ENST00000526430 HABP4Q5JVS0 413 aaKnown RBP14.5□□□□□ -0.09
NEDD8-204ENST00000526430 ZNF790Q6PG37 636 aa14.5□□□□□ -0.09
NEDD8-204ENST00000526430 LARGE2Q8N3Y3 721 aa14.5□□□□□ -0.09
NEDD8-204ENST00000526430 GLIS2Q9BZE0 524 aaPredicted RBP14.5□□□□□ -0.09
NEDD8-204ENST00000526430 MIER1Q8N108 512 aa14.49□□□□□ -0.09
NEDD8-204ENST00000526430 RIC1Q4ADV7 1423 aa14.49□□□□□ -0.09
NEDD8-204ENST00000526430 MKI67P46013 3256 aaKnown RBP14.48□□□□□ -0.09
NEDD8-204ENST00000526430 FAM155AB1AL88 458 aaPredicted RBP14.48□□□□□ -0.09
NEDD8-204ENST00000526430 A1BGP04217 495 aa14.48□□□□□ -0.09
NEDD8-204ENST00000526430 HMOX1P09601 288 aa14.48□□□□□ -0.09
NEDD8-204ENST00000526430 HUNKP57058 714 aa14.48□□□□□ -0.09
NEDD8-204ENST00000526430 CDC37L1Q7L3B6 337 aa14.48□□□□□ -0.09
NEDD8-204ENST00000526430 CFAP53Q96M91 514 aa14.48□□□□□ -0.09
NEDD8-204ENST00000526430 HPS5Q9UPZ3 1129 aa14.48□□□□□ -0.09
NEDD8-204ENST00000526430 PKN2Q16513 984 aaKnown RBP14.47□□□□□ -0.09
NEDD8-204ENST00000526430 MTHFSDQ2M296 383 aaKnown RBP14.47□□□□□ -0.09
NEDD8-204ENST00000526430 NIM1KQ8IY84 436 aa14.47□□□□□ -0.09
NEDD8-204ENST00000526430 PNISRQ8TF01 805 aaKnown RBP14.47□□□□□ -0.09
NEDD8-204ENST00000526430 RSPH6AQ9H0K4 717 aa14.47□□□□□ -0.09
NEDD8-204ENST00000526430 VPS33BQ9H267 617 aa14.47□□□□□ -0.09
NEDD8-204ENST00000526430 ZNF408Q9H9D4 720 aa14.47□□□□□ -0.09
NEDD8-204ENST00000526430 RNF186Q9NXI6 227 aa14.47□□□□□ -0.09
NEDD8-204ENST00000526430 LAMB4A4D0S4 1761 aa14.47□□□□□ -0.09
NEDD8-204ENST00000526430 U2SURPO15042 1029 aaKnown RBP14.46□□□□□ -0.09
NEDD8-204ENST00000526430 RGMBQ6NW40 437 aa14.46□□□□□ -0.09
NEDD8-204ENST00000526430 CCDC102AQ96A19 550 aa14.46□□□□□ -0.09
NEDD8-204ENST00000526430 PHACTR3Q96KR7 559 aa14.46□□□□□ -0.09
NEDD8-204ENST00000526430 FMNL2Q96PY5 1086 aa14.46□□□□□ -0.09
NEDD8-204ENST00000526430 PLEKHF1Q96S99 279 aa14.46□□□□□ -0.09
NEDD8-204ENST00000526430 NIP7Q9Y221 180 aaKnown RBP eCLIP14.46□□□□□ -0.09
NEDD8-204ENST00000526430 TRPA1O75762 1119 aa14.45□□□□□ -0.1
NEDD8-204ENST00000526430 HOXA10P31260 410 aaPredicted RBP14.45□□□□□ -0.1
NEDD8-204ENST00000526430 ADAMTS8Q9UP79 889 aa14.45□□□□□ -0.1
NEDD8-204ENST00000526430 U2AF1L5P0DN76 240 aaPredicted RBP14.44□□□□□ -0.1
NEDD8-204ENST00000526430 U2AF1Q01081 240 aaKnown RBP eCLIP14.44□□□□□ -0.1
NEDD8-204ENST00000526430 KIF23Q02241 960 aaPredicted RBP14.44□□□□□ -0.1
NEDD8-204ENST00000526430 TEFQ10587 303 aa14.44□□□□□ -0.1
NEDD8-204ENST00000526430 ANKRD36CQ5JPF3 1778 aa14.43□□□□□ -0.1
NEDD8-204ENST00000526430 GMPSP49915 693 aaPredicted RBP14.43□□□□□ -0.1
NEDD8-204ENST00000526430 HIRAP54198 1017 aaPredicted RBP14.43□□□□□ -0.1
NEDD8-204ENST00000526430 CXCL9Q07325 125 aa14.43□□□□□ -0.1
NEDD8-204ENST00000526430 REM2Q8IYK8 340 aaPredicted RBP14.43□□□□□ -0.1
NEDD8-204ENST00000526430 ZNRF3Q9ULT6 936 aa14.43□□□□□ -0.1
NEDD8-204ENST00000526430 NUDCQ9Y266 331 aa14.43□□□□□ -0.1
NEDD8-204ENST00000526430 ABCC12Q96J65 1359 aa14.43□□□□□ -0.1
NEDD8-204ENST00000526430 LAMB2P55268 1798 aa14.42□□□□□ -0.1
NEDD8-204ENST00000526430 KIAA0100Q14667 2235 aaKnown RBP14.42□□□□□ -0.1
NEDD8-204ENST00000526430 DDX60Q8IY21 1712 aaKnown RBP14.42□□□□□ -0.1
NEDD8-204ENST00000526430 PPIP5K2O43314 1243 aa14.42□□□□□ -0.1
NEDD8-204ENST00000526430 FXR1P51114 621 aaKnown RBP eCLIP14.42□□□□□ -0.1
NEDD8-204ENST00000526430 IBTKQ9P2D0 1353 aaPredicted RBP14.42□□□□□ -0.1
NEDD8-204ENST00000526430 PRKAR2BP31323 418 aa14.41□□□□□ -0.1
NEDD8-204ENST00000526430 IL17REQ8NFR9 667 aa14.41□□□□□ -0.1
NEDD8-204ENST00000526430 RPGRQ92834 1020 aaKnown RBP14.41□□□□□ -0.1
NEDD8-204ENST00000526430 CRAMP1Q96RY5 1269 aa14.41□□□□□ -0.1
NEDD8-204ENST00000526430 CSRNP1Q96S65 589 aa14.41□□□□□ -0.1
NEDD8-204ENST00000526430 NYXQ9GZU5 481 aa14.41□□□□□ -0.1
NEDD8-204ENST00000526430 GBA2Q9HCG7 927 aaPredicted RBP14.41□□□□□ -0.1
NEDD8-204ENST00000526430 MRS2Q9HD23 443 aa14.41□□□□□ -0.1
NEDD8-204ENST00000526430 CEMIPQ8WUJ3 1361 aa14.41□□□□□ -0.1
NEDD8-204ENST00000526430 PAPPA2Q9BXP8 1791 aa14.41□□□□□ -0.1
NEDD8-204ENST00000526430 CEP290O15078 2479 aa14.4□□□□□ -0.1
NEDD8-204ENST00000526430 CCER2I3L3R5 266 aa14.4□□□□□ -0.1
NEDD8-204ENST00000526430 SLC10A3P09131 477 aa14.4□□□□□ -0.1
NEDD8-204ENST00000526430 GTF2E1P29083 439 aaPredicted RBP14.4□□□□□ -0.1
NEDD8-204ENST00000526430 AOC3Q16853 763 aa14.4□□□□□ -0.1
NEDD8-204ENST00000526430 C2orf69Q8N8R5 385 aa14.4□□□□□ -0.1
NEDD8-204ENST00000526430 TRPM4Q8TD43 1214 aa14.4□□□□□ -0.1
NEDD8-204ENST00000526430 USP16Q9Y5T5 823 aa14.4□□□□□ -0.1
NEDD8-204ENST00000526430 HTTP42858 3142 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms