RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 ELOA3CA0A087WX78 387 aaPredicted RBP7.35□□□□□ -1.23
CD44-219ENST00000525685 ELOA3DA6NLF2 546 aaPredicted RBP7.35□□□□□ -1.23
CD44-219ENST00000525685 TGFBR3LH3BV60 316 aa7.35□□□□□ -1.23
CD44-219ENST00000525685 COL8A1P27658 744 aa7.35□□□□□ -1.23
CD44-219ENST00000525685 ELOA3BQ3SY89 546 aa7.35□□□□□ -1.23
CD44-219ENST00000525685 CCDC82Q8N4S0 544 aa7.35□□□□□ -1.23
CD44-219ENST00000525685 ELOA3Q8NG57 546 aa7.35□□□□□ -1.23
CD44-219ENST00000525685 QTRT2Q9H974 415 aaKnown RBP7.35□□□□□ -1.23
CD44-219ENST00000525685 DMGDHQ9UI17 866 aaKnown RBP7.35□□□□□ -1.23
CD44-219ENST00000525685 ACIN1Q9UKV3 1341 aaKnown RBP7.34□□□□□ -1.23
CD44-219ENST00000525685 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.34□□□□□ -1.23
CD44-219ENST00000525685 ADARB2-AS1A8MUL3 147 aa7.34□□□□□ -1.23
CD44-219ENST00000525685 ITGB2P05107 769 aa7.34□□□□□ -1.23
CD44-219ENST00000525685 SWI5Q1ZZU3 235 aa7.34□□□□□ -1.23
CD44-219ENST00000525685 GPAT2Q6NUI2 795 aa7.34□□□□□ -1.23
CD44-219ENST00000525685 TNFRSF25Q93038 417 aa7.34□□□□□ -1.23
CD44-219ENST00000525685 SUV39H2Q9H5I1 410 aa7.34□□□□□ -1.23
CD44-219ENST00000525685 NISCHQ9Y2I1 1504 aa7.33□□□□□ -1.24
CD44-219ENST00000525685 GNB5O14775 395 aa7.33□□□□□ -1.24
CD44-219ENST00000525685 FAM69CQ0P6D2 419 aa7.33□□□□□ -1.24
CD44-219ENST00000525685 PLA2G4EQ3MJ16 856 aa7.33□□□□□ -1.24
CD44-219ENST00000525685 RAB44Q7Z6P3 723 aaPredicted RBP7.33□□□□□ -1.24
CD44-219ENST00000525685 STK32AQ8WU08 396 aa7.33□□□□□ -1.24
CD44-219ENST00000525685 MYO19Q96H55 970 aa7.33□□□□□ -1.24
CD44-219ENST00000525685 C1orf115Q9H7X2 142 aa7.33□□□□□ -1.24
CD44-219ENST00000525685 KLK14Q9P0G3 267 aa7.33□□□□□ -1.24
CD44-219ENST00000525685 KRBA1A5PL33 1030 aa7.32□□□□□ -1.24
CD44-219ENST00000525685 ATG7O95352 703 aa7.32□□□□□ -1.24
CD44-219ENST00000525685 IGHA1P01876 353 aa7.32□□□□□ -1.24
CD44-219ENST00000525685 NEUROD1Q13562 356 aa7.32□□□□□ -1.24
CD44-219ENST00000525685 DGKZQ13574 1117 aa7.32□□□□□ -1.24
CD44-219ENST00000525685 OCLNQ16625 522 aa7.32□□□□□ -1.24
CD44-219ENST00000525685 ALYREFQ86V81 257 aaKnown RBP7.32□□□□□ -1.24
CD44-219ENST00000525685 VTI1AQ96AJ9 217 aa7.32□□□□□ -1.24
CD44-219ENST00000525685 PIK3R2O00459 728 aa7.31□□□□□ -1.24
CD44-219ENST00000525685 ALAS2P22557 587 aa7.31□□□□□ -1.24
CD44-219ENST00000525685 GRNP28799 593 aaKnown RBP7.31□□□□□ -1.24
CD44-219ENST00000525685 FKBP5Q13451 457 aaPredicted RBP7.31□□□□□ -1.24
CD44-219ENST00000525685 PRIMPOLQ96LW4 560 aa7.31□□□□□ -1.24
CD44-219ENST00000525685 PRMT3O60678 531 aa7.3□□□□□ -1.24
CD44-219ENST00000525685 INPP5BP32019 993 aa7.3□□□□□ -1.24
CD44-219ENST00000525685 BHMTQ93088 406 aa7.3□□□□□ -1.24
CD44-219ENST00000525685 GSX2Q9BZM3 304 aa7.3□□□□□ -1.24
CD44-219ENST00000525685 LRFN2Q9ULH4 789 aa7.3□□□□□ -1.24
CD44-219ENST00000525685 STARD13Q9Y3M8 1113 aa7.3□□□□□ -1.24
CD44-219ENST00000525685 ADH7P40394 386 aa7.29□□□□□ -1.24
CD44-219ENST00000525685 IDH3AP50213 366 aa7.29□□□□□ -1.24
CD44-219ENST00000525685 C11orf91Q3C1V1 193 aa7.29□□□□□ -1.24
CD44-219ENST00000525685 TMEM164Q5U3C3 297 aa7.29□□□□□ -1.24
CD44-219ENST00000525685 PBXIP1Q96AQ6 731 aa7.29□□□□□ -1.24
CD44-219ENST00000525685 TRIM11Q96F44 468 aa7.29□□□□□ -1.24
CD44-219ENST00000525685 EFCC1Q9HA90 598 aa7.29□□□□□ -1.24
CD44-219ENST00000525685 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.29□□□□□ -1.245e-38■■■■■ 698.7
CD44-219ENST00000525685 NOP53Q9NZM5 478 aaKnown RBP7.29□□□□□ -1.24
CD44-219ENST00000525685 MSTNO14793 375 aa7.27□□□□□ -1.25
CD44-219ENST00000525685 MICAL2O94851 1124 aa7.27□□□□□ -1.25
CD44-219ENST00000525685 ALBP02768 609 aa7.27□□□□□ -1.25
CD44-219ENST00000525685 PROCP04070 461 aa7.27□□□□□ -1.25
CD44-219ENST00000525685 EPB42P16452 691 aa7.27□□□□□ -1.25
CD44-219ENST00000525685 ARSDP51689 593 aa7.27□□□□□ -1.25
CD44-219ENST00000525685 CCINQ13939 588 aa7.27□□□□□ -1.25
CD44-219ENST00000525685 COL9A3Q14050 684 aaPredicted RBP7.27□□□□□ -1.25
CD44-219ENST00000525685 COX20Q5RI15 118 aa7.27□□□□□ -1.25
CD44-219ENST00000525685 SPOCK3Q9BQ16 436 aa7.27□□□□□ -1.25
CD44-219ENST00000525685 PRDM6Q9NQX0 595 aa7.27□□□□□ -1.25
CD44-219ENST00000525685 M0R082 166 aa7.26□□□□□ -1.25
CD44-219ENST00000525685 C20orf204Q6ZNR8 217 aa7.26□□□□□ -1.25
CD44-219ENST00000525685 MICALL1Q8N3F8 863 aa7.26□□□□□ -1.25
CD44-219ENST00000525685 ZNF417Q8TAU3 575 aa7.26□□□□□ -1.25
CD44-219ENST00000525685 COL26A1Q96A83 441 aa7.26□□□□□ -1.25
CD44-219ENST00000525685 IFT43Q96FT9 208 aa7.26□□□□□ -1.25
CD44-219ENST00000525685 ZNF587Q96SQ5 575 aaPredicted RBP7.26□□□□□ -1.25
CD44-219ENST00000525685 PLVAPQ9BX97 442 aa7.26□□□□□ -1.25
CD44-219ENST00000525685 CXXC1Q9P0U4 656 aaPredicted RBP7.26□□□□□ -1.25
CD44-219ENST00000525685 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.26□□□□□ -1.25
CD44-219ENST00000525685 OPLAHO14841 1288 aa7.25□□□□□ -1.25
CD44-219ENST00000525685 NFKB1P19838 968 aa7.25□□□□□ -1.25
CD44-219ENST00000525685 CLP1Q92989 425 aaKnown RBP7.25□□□□□ -1.25
CD44-219ENST00000525685 PNMA5Q96PV4 448 aa7.25□□□□□ -1.25
CD44-219ENST00000525685 UBE2OQ9C0C9 1292 aaKnown RBP7.25□□□□□ -1.25
CD44-219ENST00000525685 SAP130Q9H0E3 1048 aa7.25□□□□□ -1.25
CD44-219ENST00000525685 C11orf16Q9NQ32 467 aa7.25□□□□□ -1.25
CD44-219ENST00000525685 SLAIN2Q9P270 581 aa7.25□□□□□ -1.25
CD44-219ENST00000525685 TBC1D8BQ0IIM8 1120 aa7.24□□□□□ -1.25
CD44-219ENST00000525685 CAPN12Q6ZSI9 719 aa7.24□□□□□ -1.25
CD44-219ENST00000525685 C8orf86Q6ZUL3 223 aa7.24□□□□□ -1.25
CD44-219ENST00000525685 DNAJB12Q9NXW2 375 aaKnown RBP7.24□□□□□ -1.25
CD44-219ENST00000525685 SLC6A14Q9UN76 642 aa7.24□□□□□ -1.25
CD44-219ENST00000525685 MAP3K6O95382 1288 aa7.23□□□□□ -1.25
CD44-219ENST00000525685 NID1P14543 1247 aa7.23□□□□□ -1.25
CD44-219ENST00000525685 C16orf46Q6P387 395 aa7.23□□□□□ -1.25
CD44-219ENST00000525685 TREML1Q86YW5 311 aa7.23□□□□□ -1.25
CD44-219ENST00000525685 MKNK1Q9BUB5 465 aa7.23□□□□□ -1.25
CD44-219ENST00000525685 IGFLR1Q9H665 355 aa7.23□□□□□ -1.25
CD44-219ENST00000525685 ZFATQ9P243 1243 aa7.23□□□□□ -1.25
CD44-219ENST00000525685 RTCBQ9Y3I0 505 aaKnown RBP7.23□□□□□ -1.25
CD44-219ENST00000525685 CD163Q86VB7 1156 aa7.22□□□□□ -1.25
CD44-219ENST00000525685 ETFBKMTQ8IXQ9 262 aa7.22□□□□□ -1.25
CD44-219ENST00000525685 NAGPAQ9UK23 515 aa7.22□□□□□ -1.25
CD44-219ENST00000525685 USP20Q9Y2K6 914 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms