RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 PTPN12Q05209 780 aaKnown RBP14.23□□□□□ -0.13
PTPRK-216ENST00000524481 OSBPL3Q9H4L5 887 aa14.23□□□□□ -0.13
PTPRK-216ENST00000524481 RTN4Q9NQC3 1192 aaKnown RBP14.23□□□□□ -0.13
PTPRK-216ENST00000524481 PKP1Q13835 747 aa14.23□□□□□ -0.13
PTPRK-216ENST00000524481 GSE1Q14687 1217 aa14.23□□□□□ -0.13
PTPRK-216ENST00000524481 HSP90AB3PQ58FF7 597 aa14.23□□□□□ -0.13
PTPRK-216ENST00000524481 DZIP3Q86Y13 1208 aaKnown RBP14.23□□□□□ -0.13
PTPRK-216ENST00000524481 GOLIM4O00461 696 aa14.22□□□□□ -0.13
PTPRK-216ENST00000524481 PPFIA3O75145 1194 aa14.22□□□□□ -0.13
PTPRK-216ENST00000524481 CCDC129Q6ZRS4 1044 aa14.22□□□□□ -0.13
PTPRK-216ENST00000524481 SEC62Q99442 399 aaKnown RBP14.22□□□□□ -0.13
PTPRK-216ENST00000524481 CNNM1Q9NRU3 951 aa14.22□□□□□ -0.13
PTPRK-216ENST00000524481 OVOS2A0A0G2JMS6 1433 aa14.22□□□□□ -0.13
PTPRK-216ENST00000524481 SNAP23O00161 211 aa14.22□□□□□ -0.13
PTPRK-216ENST00000524481 SLC4A9Q96Q91 983 aa14.22□□□□□ -0.13
PTPRK-216ENST00000524481 ANTXR1Q9H6X2 564 aa14.22□□□□□ -0.13
PTPRK-216ENST00000524481 TRPM3Q9HCF6 1732 aaPredicted RBP14.22□□□□□ -0.13
PTPRK-216ENST00000524481 KIF1AQ12756 1690 aa14.22□□□□□ -0.13
PTPRK-216ENST00000524481 PTH1RQ03431 593 aa14.22□□□□□ -0.13
PTPRK-216ENST00000524481 FGD1P98174 961 aa14.21□□□□□ -0.13
PTPRK-216ENST00000524481 PTF1AQ7RTS3 328 aa14.21□□□□□ -0.13
PTPRK-216ENST00000524481 TNPO1Q92973 898 aaKnown RBP14.21□□□□□ -0.13
PTPRK-216ENST00000524481 CEP126Q9P2H0 1117 aa14.21□□□□□ -0.13
PTPRK-216ENST00000524481 STAP2Q9UGK3 403 aa14.21□□□□□ -0.13
PTPRK-216ENST00000524481 DBNLQ9UJU6 430 aaKnown RBP14.21□□□□□ -0.13
PTPRK-216ENST00000524481 NMIQ13287 307 aaPredicted RBP14.21□□□□□ -0.14
PTPRK-216ENST00000524481 LDHAL6AQ6ZMR3 332 aa14.21□□□□□ -0.14
PTPRK-216ENST00000524481 CASTP20810 708 aaKnown RBP14.2□□□□□ -0.14
PTPRK-216ENST00000524481 TNNI3KQ59H18 835 aa14.2□□□□□ -0.14
PTPRK-216ENST00000524481 LRP10Q7Z4F1 713 aa14.2□□□□□ -0.14
PTPRK-216ENST00000524481 FPGT-TNNI3KV9GXZ4 949 aa14.2□□□□□ -0.14
PTPRK-216ENST00000524481 IFIT5Q13325 482 aaKnown RBP14.2□□□□□ -0.14
PTPRK-216ENST00000524481 TCIRG1Q13488 830 aa14.2□□□□□ -0.14
PTPRK-216ENST00000524481 RASEFQ8IZ41 740 aa14.2□□□□□ -0.14
PTPRK-216ENST00000524481 MARCH10Q8NA82 808 aaPredicted RBP14.2□□□□□ -0.14
PTPRK-216ENST00000524481 RUFY2Q8WXA3 655 aa14.2□□□□□ -0.14
PTPRK-216ENST00000524481 JAKMIP1Q96N16 626 aaKnown RBP14.2□□□□□ -0.14
PTPRK-216ENST00000524481 STRCQ7RTU9 1775 aa14.2□□□□□ -0.14
PTPRK-216ENST00000524481 MCM4P33991 863 aa14.2□□□□□ -0.14
PTPRK-216ENST00000524481 MCTP1Q6DN14 999 aa14.19□□□□□ -0.14
PTPRK-216ENST00000524481 STK3Q13188 491 aa14.19□□□□□ -0.14
PTPRK-216ENST00000524481 WASHC4Q2M389 1173 aa14.19□□□□□ -0.14
PTPRK-216ENST00000524481 SALL3Q9BXA9 1300 aa14.19□□□□□ -0.14
PTPRK-216ENST00000524481 METTL24Q5JXM2 366 aa14.18□□□□□ -0.14
PTPRK-216ENST00000524481 SGSM2O43147 1006 aa14.18□□□□□ -0.14
PTPRK-216ENST00000524481 STK11IPQ8N1F8 1099 aa14.18□□□□□ -0.14
PTPRK-216ENST00000524481 CCDC191Q8NCU4 936 aa14.18□□□□□ -0.14
PTPRK-216ENST00000524481 EVI5LQ96CN4 794 aa14.18□□□□□ -0.14
PTPRK-216ENST00000524481 TMX3Q96JJ7 454 aa14.18□□□□□ -0.14
PTPRK-216ENST00000524481 IQSEC3Q9UPP2 1182 aaPredicted RBP14.18□□□□□ -0.14
PTPRK-216ENST00000524481 A0A0D9SFI3 127 aa14.18□□□□□ -0.14
PTPRK-216ENST00000524481 IRS4O14654 1257 aaPredicted RBP14.18□□□□□ -0.14
PTPRK-216ENST00000524481 PHF14O94880 888 aa14.18□□□□□ -0.14
PTPRK-216ENST00000524481 MTX1Q13505 466 aa14.18□□□□□ -0.14
PTPRK-216ENST00000524481 NKX1-1Q15270 411 aaPredicted RBP14.18□□□□□ -0.14
PTPRK-216ENST00000524481 PI16Q6UXB8 463 aa14.18□□□□□ -0.14
PTPRK-216ENST00000524481 ALS2Q96Q42 1657 aa14.17□□□□□ -0.14
PTPRK-216ENST00000524481 FOXO4P98177 505 aa14.17□□□□□ -0.14
PTPRK-216ENST00000524481 SNX21Q969T3 373 aa14.17□□□□□ -0.14
PTPRK-216ENST00000524481 A0A1B0GUL7 405 aa14.17□□□□□ -0.14
PTPRK-216ENST00000524481 IFIT1P09914 478 aaKnown RBP14.17□□□□□ -0.14
PTPRK-216ENST00000524481 TEX13AQ9BXU3 409 aaPredicted RBP14.17□□□□□ -0.14
PTPRK-216ENST00000524481 LRRC2Q9BYS8 371 aa14.17□□□□□ -0.14
PTPRK-216ENST00000524481 GREM2Q9H772 168 aa14.17□□□□□ -0.14
PTPRK-216ENST00000524481 LOC102724428A0A0B4J2F2 783 aa14.16□□□□□ -0.14
PTPRK-216ENST00000524481 H7C1W4 665 aa14.16□□□□□ -0.14
PTPRK-216ENST00000524481 TRAK2O60296 914 aa14.16□□□□□ -0.14
PTPRK-216ENST00000524481 EIF5BO60841 1220 aaKnown RBP14.16□□□□□ -0.14
PTPRK-216ENST00000524481 FOSBP53539 338 aa14.16□□□□□ -0.14
PTPRK-216ENST00000524481 SIK1P57059 783 aa14.16□□□□□ -0.14
PTPRK-216ENST00000524481 ADCK5Q3MIX3 580 aa14.16□□□□□ -0.14
PTPRK-216ENST00000524481 TAF5LO75529 589 aa14.16□□□□□ -0.14
PTPRK-216ENST00000524481 CYP19A1P11511 503 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-216ENST00000524481 ZKSCAN1P17029 563 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-216ENST00000524481 ADORA1P30542 326 aa14.16□□□□□ -0.14
PTPRK-216ENST00000524481 NIP7Q9Y221 180 aaKnown RBP eCLIP14.16□□□□□ -0.14
PTPRK-216ENST00000524481 CRKLP46109 303 aaKnown RBP14.16□□□□□ -0.14
PTPRK-216ENST00000524481 TTC39AQ5SRH9 613 aa14.16□□□□□ -0.14
PTPRK-216ENST00000524481 COPRSQ9NQ92 184 aa14.16□□□□□ -0.14
PTPRK-216ENST00000524481 TTC41PQ6P2S7 1318 aa14.15□□□□□ -0.14
PTPRK-216ENST00000524481 ITGA6P23229 1130 aa14.15□□□□□ -0.14
PTPRK-216ENST00000524481 ZNF589Q86UQ0 364 aaPredicted RBP14.15□□□□□ -0.14
PTPRK-216ENST00000524481 NECAB1Q8N987 351 aa14.15□□□□□ -0.14
PTPRK-216ENST00000524481 GBP4Q96PP9 640 aa14.15□□□□□ -0.14
PTPRK-216ENST00000524481 USP21Q9UK80 565 aa14.15□□□□□ -0.14
PTPRK-216ENST00000524481 RBM8AQ9Y5S9 174 aaKnown RBP14.15□□□□□ -0.14
PTPRK-216ENST00000524481 EYA2O00167 538 aa14.14□□□□□ -0.15
PTPRK-216ENST00000524481 GDPD2Q9HCC8 539 aa14.14□□□□□ -0.15
PTPRK-216ENST00000524481 SNX14Q9Y5W7 946 aa14.14□□□□□ -0.15
PTPRK-216ENST00000524481 KDM4AO75164 1064 aa14.14□□□□□ -0.15
PTPRK-216ENST00000524481 GIGYF2Q6Y7W6 1299 aaKnown RBP14.14□□□□□ -0.15
PTPRK-216ENST00000524481 EP400Q96L91 3159 aa14.14□□□□□ -0.15
PTPRK-216ENST00000524481 GOLGA6L22H0YM25 854 aa14.14□□□□□ -0.15
PTPRK-216ENST00000524481 APPP05067 770 aa14.14□□□□□ -0.15
PTPRK-216ENST00000524481 RFX5P48382 616 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-216ENST00000524481 CHST3Q7LGC8 479 aa14.14□□□□□ -0.15
PTPRK-216ENST00000524481 MPHOSPH8Q99549 860 aa14.14□□□□□ -0.15
PTPRK-216ENST00000524481 DDX49Q9Y6V7 483 aaKnown RBP14.14□□□□□ -0.15
PTPRK-216ENST00000524481 SPATA31A1Q5TZJ5 1347 aa14.14□□□□□ -0.15
PTPRK-216ENST00000524481 COL9A3Q14050 684 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms