RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 PSMD1Q99460 953 aa10.6□□□□□ -0.71
NSMCE2-213ENST00000523824 NYXQ9GZU5 481 aa10.6□□□□□ -0.71
NSMCE2-213ENST00000523824 RSPH6AQ9H0K4 717 aa10.6□□□□□ -0.71
NSMCE2-213ENST00000523824 DDX21Q9NR30 783 aaKnown RBP eCLIP10.6□□□□□ -0.71
NSMCE2-213ENST00000523824 NUDCQ9Y266 331 aa10.6□□□□□ -0.71
NSMCE2-213ENST00000523824 COL3A1P02461 1466 aaPredicted RBP10.6□□□□□ -0.71
NSMCE2-213ENST00000523824 ECE1P42892 770 aa10.59□□□□□ -0.71
NSMCE2-213ENST00000523824 GRM1Q13255 1194 aa10.59□□□□□ -0.71
NSMCE2-213ENST00000523824 LARGE2Q8N3Y3 721 aa10.59□□□□□ -0.71
NSMCE2-213ENST00000523824 NGEFQ8N5V2 710 aa10.59□□□□□ -0.71
NSMCE2-213ENST00000523824 RPGRQ92834 1020 aaKnown RBP10.59□□□□□ -0.71
NSMCE2-213ENST00000523824 SIPA1L3O60292 1781 aaPredicted RBP10.59□□□□□ -0.71
NSMCE2-213ENST00000523824 BCORQ6W2J9 1755 aa10.59□□□□□ -0.71
NSMCE2-213ENST00000523824 NPC1L1Q9UHC9 1359 aa10.58□□□□□ -0.72
NSMCE2-213ENST00000523824 CCDC85CA6NKD9 419 aa10.58□□□□□ -0.72
NSMCE2-213ENST00000523824 U2AF1L5P0DN76 240 aaPredicted RBP10.58□□□□□ -0.72
NSMCE2-213ENST00000523824 U2AF1Q01081 240 aaKnown RBP eCLIP10.58□□□□□ -0.72
NSMCE2-213ENST00000523824 DCTN1Q14203 1278 aa10.58□□□□□ -0.72
NSMCE2-213ENST00000523824 TAF7Q15545 349 aaPredicted RBP10.58□□□□□ -0.72
NSMCE2-213ENST00000523824 FAM161AQ3B820 660 aa10.58□□□□□ -0.72
NSMCE2-213ENST00000523824 NUTM1Q86Y26 1132 aa10.58□□□□□ -0.72
NSMCE2-213ENST00000523824 CAPNS2Q96L46 248 aa10.58□□□□□ -0.72
NSMCE2-213ENST00000523824 GPR101Q96P66 508 aaPredicted RBP10.58□□□□□ -0.72
NSMCE2-213ENST00000523824 TCERG1O14776 1098 aaKnown RBP10.57□□□□□ -0.72
NSMCE2-213ENST00000523824 HTATSF1O43719 755 aaKnown RBP10.57□□□□□ -0.72
NSMCE2-213ENST00000523824 EPS15P42566 896 aa10.57□□□□□ -0.72
NSMCE2-213ENST00000523824 FMR1Q06787 632 aaKnown RBP eCLIP10.57□□□□□ -0.72
NSMCE2-213ENST00000523824 CRY2Q49AN0 593 aa10.57□□□□□ -0.72
NSMCE2-213ENST00000523824 GRIPAP1Q4V328 841 aa10.57□□□□□ -0.72
NSMCE2-213ENST00000523824 CYP4F22Q6NT55 531 aa10.57□□□□□ -0.72
NSMCE2-213ENST00000523824 USP50Q70EL3 339 aaPredicted RBP10.57□□□□□ -0.72
NSMCE2-213ENST00000523824 RBM17Q96I25 401 aaKnown RBP10.57□□□□□ -0.72
NSMCE2-213ENST00000523824 TMX4Q9H1E5 349 aaPredicted RBP10.57□□□□□ -0.72
NSMCE2-213ENST00000523824 ERVV-1B6SEH8 477 aa10.56□□□□□ -0.72
NSMCE2-213ENST00000523824 SLC34A2O95436 690 aa10.56□□□□□ -0.72
NSMCE2-213ENST00000523824 SCNN1DP51172 638 aa10.56□□□□□ -0.72
NSMCE2-213ENST00000523824 MLLT1Q03111 559 aaPredicted RBP10.56□□□□□ -0.72
NSMCE2-213ENST00000523824 KIF6Q6ZMV9 814 aa10.56□□□□□ -0.72
NSMCE2-213ENST00000523824 NIM1KQ8IY84 436 aa10.56□□□□□ -0.72
NSMCE2-213ENST00000523824 MIS18AQ9NYP9 233 aa10.56□□□□□ -0.72
NSMCE2-213ENST00000523824 RRP7AQ9Y3A4 280 aaKnown RBP10.56□□□□□ -0.72
NSMCE2-213ENST00000523824 ADAMTSL1Q8N6G6 1762 aa10.56□□□□□ -0.72
NSMCE2-213ENST00000523824 TRAF5O00463 557 aa10.55□□□□□ -0.72
NSMCE2-213ENST00000523824 GPTP24298 496 aa10.55□□□□□ -0.72
NSMCE2-213ENST00000523824 HOXA10P31260 410 aaPredicted RBP10.55□□□□□ -0.72
NSMCE2-213ENST00000523824 CST9Q5W186 159 aa10.55□□□□□ -0.72
NSMCE2-213ENST00000523824 TLL2Q9Y6L7 1015 aa10.55□□□□□ -0.72
NSMCE2-213ENST00000523824 MAP3K15Q6ZN16 1313 aa10.55□□□□□ -0.72
NSMCE2-213ENST00000523824 ABCC12Q96J65 1359 aa10.54□□□□□ -0.72
NSMCE2-213ENST00000523824 PPEF1O14829 653 aaPredicted RBP10.54□□□□□ -0.72
NSMCE2-213ENST00000523824 PPIP5K2O43314 1243 aa10.54□□□□□ -0.72
NSMCE2-213ENST00000523824 MAP2K2P36507 400 aa10.54□□□□□ -0.72
NSMCE2-213ENST00000523824 TTLL7Q6ZT98 887 aa10.54□□□□□ -0.72
NSMCE2-213ENST00000523824 SNED1Q8TER0 1413 aa10.54□□□□□ -0.72
NSMCE2-213ENST00000523824 CFAP44Q96MT7 982 aa10.54□□□□□ -0.72
NSMCE2-213ENST00000523824 CRAMP1Q96RY5 1269 aa10.54□□□□□ -0.72
NSMCE2-213ENST00000523824 ADARB2Q9NS39 739 aaKnown RBP10.54□□□□□ -0.72
NSMCE2-213ENST00000523824 TSKSQ9UJT2 592 aa10.54□□□□□ -0.72
NSMCE2-213ENST00000523824 AOC2O75106 756 aa10.53□□□□□ -0.72
NSMCE2-213ENST00000523824 NEFMP07197 916 aa10.53□□□□□ -0.72
NSMCE2-213ENST00000523824 MYL6BP14649 208 aa10.53□□□□□ -0.72
NSMCE2-213ENST00000523824 SUSD4Q5VX71 490 aa10.53□□□□□ -0.72
NSMCE2-213ENST00000523824 PNISRQ8TF01 805 aaKnown RBP10.53□□□□□ -0.72
NSMCE2-213ENST00000523824 ZBTB3Q9H5J0 574 aa10.53□□□□□ -0.72
NSMCE2-213ENST00000523824 CELF2O95319 508 aaKnown RBP10.52□□□□□ -0.73
NSMCE2-213ENST00000523824 RGS19P49795 217 aa10.52□□□□□ -0.73
NSMCE2-213ENST00000523824 AOC3Q16853 763 aa10.52□□□□□ -0.73
NSMCE2-213ENST00000523824 PPP1R42Q7Z4L9 355 aa10.52□□□□□ -0.73
NSMCE2-213ENST00000523824 SAPCD2Q86UD0 394 aa10.52□□□□□ -0.73
NSMCE2-213ENST00000523824 SUPT20HQ8NEM7 779 aa10.52□□□□□ -0.73
NSMCE2-213ENST00000523824 NLRP3Q96P20 1036 aa10.52□□□□□ -0.73
NSMCE2-213ENST00000523824 VPS33BQ9H267 617 aa10.52□□□□□ -0.73
NSMCE2-213ENST00000523824 GPRC5DQ9NZD1 345 aa10.52□□□□□ -0.73
NSMCE2-213ENST00000523824 COL4A5P29400 1685 aa10.52□□□□□ -0.73
NSMCE2-213ENST00000523824 UBN2Q6ZU65 1347 aa10.52□□□□□ -0.73
NSMCE2-213ENST00000523824 LTBP1Q14766 1721 aa10.51□□□□□ -0.73
NSMCE2-213ENST00000523824 CA12O43570 354 aa10.51□□□□□ -0.73
NSMCE2-213ENST00000523824 PPP2R1AP30153 589 aa10.51□□□□□ -0.73
NSMCE2-213ENST00000523824 CXCL9Q07325 125 aa10.51□□□□□ -0.73
NSMCE2-213ENST00000523824 SLC51AQ86UW1 340 aa10.51□□□□□ -0.73
NSMCE2-213ENST00000523824 ZNF34Q8IZ26 560 aa10.51□□□□□ -0.73
NSMCE2-213ENST00000523824 BCL2L13Q9BXK5 485 aa10.51□□□□□ -0.73
NSMCE2-213ENST00000523824 ZNRF3Q9ULT6 936 aa10.51□□□□□ -0.73
NSMCE2-213ENST00000523824 ATP6V0A2Q9Y487 856 aa10.51□□□□□ -0.73
NSMCE2-213ENST00000523824 IBTKQ9P2D0 1353 aaPredicted RBP10.51□□□□□ -0.73
NSMCE2-213ENST00000523824 RIC1Q4ADV7 1423 aa10.5□□□□□ -0.73
NSMCE2-213ENST00000523824 NTSR2O95665 410 aa10.5□□□□□ -0.73
NSMCE2-213ENST00000523824 GMPSP49915 693 aaPredicted RBP10.5□□□□□ -0.73
NSMCE2-213ENST00000523824 EIF4A1P60842 406 aaKnown RBP10.5□□□□□ -0.73
NSMCE2-213ENST00000523824 PARP10Q53GL7 1025 aa10.5□□□□□ -0.73
NSMCE2-213ENST00000523824 GIGYF2Q6Y7W6 1299 aaKnown RBP10.5□□□□□ -0.73
NSMCE2-213ENST00000523824 C3orf67Q6ZVT6 689 aa10.5□□□□□ -0.73
NSMCE2-213ENST00000523824 HHIPL1Q96JK4 782 aa10.5□□□□□ -0.73
NSMCE2-213ENST00000523824 GLIS2Q9BZE0 524 aaPredicted RBP10.5□□□□□ -0.73
NSMCE2-213ENST00000523824 MCOLN1Q9GZU1 580 aa10.5□□□□□ -0.73
NSMCE2-213ENST00000523824 ZNF408Q9H9D4 720 aa10.5□□□□□ -0.73
NSMCE2-213ENST00000523824 FOXD4L1Q9NU39 408 aa10.5□□□□□ -0.73
NSMCE2-213ENST00000523824 BBOX1O75936 387 aa10.49□□□□□ -0.73
NSMCE2-213ENST00000523824 BRPF1P55201 1214 aaPredicted RBP10.49□□□□□ -0.73
NSMCE2-213ENST00000523824 TNIP1Q15025 636 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms