RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 HTRA3P83110 453 aa16.56■□□□□ 0.24
TOP1MT-217ENST00000523417 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
TOP1MT-217ENST00000523417 RBM17Q96I25 401 aaKnown RBP16.56■□□□□ 0.24
TOP1MT-217ENST00000523417 DDX21Q9NR30 783 aaKnown RBP eCLIP16.56■□□□□ 0.24
TOP1MT-217ENST00000523417 ZNF277Q9NRM2 450 aaPredicted RBP16.56■□□□□ 0.24
TOP1MT-217ENST00000523417 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
TOP1MT-217ENST00000523417 ARFGEF2Q9Y6D5 1785 aa16.56■□□□□ 0.24
TOP1MT-217ENST00000523417 IARSP41252 1262 aaKnown RBP16.55■□□□□ 0.24
TOP1MT-217ENST00000523417 PROSER3Q2NL68 480 aa16.55■□□□□ 0.24
TOP1MT-217ENST00000523417 HSP90AB3PQ58FF7 597 aa16.55■□□□□ 0.24
TOP1MT-217ENST00000523417 RPGRQ92834 1020 aaKnown RBP16.55■□□□□ 0.24
TOP1MT-217ENST00000523417 NLRP3Q96P20 1036 aa16.55■□□□□ 0.24
TOP1MT-217ENST00000523417 UTP14AQ9BVJ6 771 aaKnown RBP16.55■□□□□ 0.24
TOP1MT-217ENST00000523417 VPS33BQ9H267 617 aa16.55■□□□□ 0.24
TOP1MT-217ENST00000523417 CCDC88AQ3V6T2 1871 aa16.54■□□□□ 0.24
TOP1MT-217ENST00000523417 COPS6Q7L5N1 327 aa16.54■□□□□ 0.24
TOP1MT-217ENST00000523417 TAF1DQ9H5J8 278 aaPredicted RBP16.54■□□□□ 0.24
TOP1MT-217ENST00000523417 PRKRIP1Q9H875 184 aaPredicted RBP16.54■□□□□ 0.24
TOP1MT-217ENST00000523417 TCIRG1Q13488 830 aa16.53■□□□□ 0.24
TOP1MT-217ENST00000523417 WDR43Q15061 677 aaKnown RBP eCLIP16.53■□□□□ 0.24
TOP1MT-217ENST00000523417 CFAP44Q96MT7 982 aa16.53■□□□□ 0.24
TOP1MT-217ENST00000523417 TIAM2Q8IVF5 1701 aa16.53■□□□□ 0.24
TOP1MT-217ENST00000523417 NUP98P52948 1817 aa16.52■□□□□ 0.24
TOP1MT-217ENST00000523417 NEUROD2Q15784 382 aa16.52■□□□□ 0.24
TOP1MT-217ENST00000523417 NLRP10Q86W26 655 aa16.52■□□□□ 0.24
TOP1MT-217ENST00000523417 LDHDQ86WU2 507 aa16.52■□□□□ 0.24
TOP1MT-217ENST00000523417 CCDC146Q8IYE0 955 aa16.52■□□□□ 0.24
TOP1MT-217ENST00000523417 GPC2Q8N158 579 aa16.52■□□□□ 0.24
TOP1MT-217ENST00000523417 XAGE3Q8WTP9 111 aa16.52■□□□□ 0.24
TOP1MT-217ENST00000523417 JDP2Q8WYK2 163 aa16.52■□□□□ 0.24
TOP1MT-217ENST00000523417 BBOX1O75936 387 aa16.51■□□□□ 0.23
TOP1MT-217ENST00000523417 ZNF853P0CG23 659 aa16.51■□□□□ 0.23
TOP1MT-217ENST00000523417 C3orf67Q6ZVT6 689 aa16.51■□□□□ 0.23
TOP1MT-217ENST00000523417 PNMA8AQ86V59 439 aaPredicted RBP16.51■□□□□ 0.23
TOP1MT-217ENST00000523417 CREBZFQ9NS37 354 aa16.51■□□□□ 0.23
TOP1MT-217ENST00000523417 HACL1Q9UJ83 578 aa16.51■□□□□ 0.23
TOP1MT-217ENST00000523417 PASKQ96RG2 1323 aa16.5■□□□□ 0.23
TOP1MT-217ENST00000523417 ZNF541Q9H0D2 1346 aa16.5■□□□□ 0.23
TOP1MT-217ENST00000523417 ITGBL1O95965 494 aaPredicted RBP16.5■□□□□ 0.23
TOP1MT-217ENST00000523417 ANXA1P04083 346 aa16.5■□□□□ 0.23
TOP1MT-217ENST00000523417 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
TOP1MT-217ENST00000523417 POTEJP0CG39 1038 aa16.5■□□□□ 0.23
TOP1MT-217ENST00000523417 RTFDC1Q9BY42 306 aaPredicted RBP16.5■□□□□ 0.23
TOP1MT-217ENST00000523417 DBF4Q9UBU7 674 aaPredicted RBP16.5■□□□□ 0.23
TOP1MT-217ENST00000523417 ATP6V0A2Q9Y487 856 aa16.5■□□□□ 0.23
TOP1MT-217ENST00000523417 PPEF1O14829 653 aaPredicted RBP16.49■□□□□ 0.23
TOP1MT-217ENST00000523417 TRIM28Q13263 835 aaKnown RBP16.49■□□□□ 0.23
TOP1MT-217ENST00000523417 KRT24Q2M2I5 525 aa16.49■□□□□ 0.23
TOP1MT-217ENST00000523417 SP8Q8IXZ3 490 aa16.49■□□□□ 0.23
TOP1MT-217ENST00000523417 PLBD2Q8NHP8 589 aa16.49■□□□□ 0.23
TOP1MT-217ENST00000523417 EPHX2P34913 555 aa16.48■□□□□ 0.23
TOP1MT-217ENST00000523417 AIMP1Q12904 312 aaKnown RBP16.48■□□□□ 0.23
TOP1MT-217ENST00000523417 ANKRD13DQ6ZTN6 518 aa16.48■□□□□ 0.23
TOP1MT-217ENST00000523417 HYPKQ9NX55 129 aa16.48■□□□□ 0.23
TOP1MT-217ENST00000523417 EIF6P56537 245 aaKnown RBP16.47■□□□□ 0.23
TOP1MT-217ENST00000523417 HDGFL1Q5TGJ6 251 aa16.47■□□□□ 0.23
TOP1MT-217ENST00000523417 NECTIN2Q92692 538 aa16.47■□□□□ 0.23
TOP1MT-217ENST00000523417 ISCA1Q9BUE6 129 aa16.47■□□□□ 0.23
TOP1MT-217ENST00000523417 TMX4Q9H1E5 349 aaPredicted RBP16.47■□□□□ 0.23
TOP1MT-217ENST00000523417 CHPF2Q9P2E5 772 aa16.47■□□□□ 0.23
TOP1MT-217ENST00000523417 TRMT112Q9UI30 125 aaKnown RBP16.47■□□□□ 0.23
TOP1MT-217ENST00000523417 SCN4AP35499 1836 aa16.47■□□□□ 0.23
TOP1MT-217ENST00000523417 SH3TC1Q8TE82 1336 aa16.46■□□□□ 0.23
TOP1MT-217ENST00000523417 CALD1Q05682 793 aaKnown RBP16.46■□□□□ 0.23
TOP1MT-217ENST00000523417 DUSP27Q5VZP5 1158 aa16.46■□□□□ 0.23
TOP1MT-217ENST00000523417 TMC4Q7Z404 712 aa16.46■□□□□ 0.23
TOP1MT-217ENST00000523417 LARGE2Q8N3Y3 721 aa16.46■□□□□ 0.23
TOP1MT-217ENST00000523417 SUPT20HQ8NEM7 779 aa16.46■□□□□ 0.23
TOP1MT-217ENST00000523417 MBIPQ9NS73 344 aa16.46■□□□□ 0.23
TOP1MT-217ENST00000523417 LAS1LQ9Y4W2 734 aaKnown RBP16.46■□□□□ 0.23
TOP1MT-217ENST00000523417 ABCC4O15439 1325 aa16.45■□□□□ 0.22
TOP1MT-217ENST00000523417 SF3B3Q15393 1217 aaKnown RBP16.45■□□□□ 0.22
TOP1MT-217ENST00000523417 IFT57Q9NWB7 429 aa16.45■□□□□ 0.22
TOP1MT-217ENST00000523417 APAF1O14727 1248 aa16.44■□□□□ 0.22
TOP1MT-217ENST00000523417 HCLS1P14317 486 aaPredicted RBP16.44■□□□□ 0.22
TOP1MT-217ENST00000523417 GNAI1P63096 354 aa16.44■□□□□ 0.22
TOP1MT-217ENST00000523417 DDX46Q7L014 1031 aaKnown RBP16.44■□□□□ 0.22
TOP1MT-217ENST00000523417 CHMP4AQ9BY43 222 aa16.44■□□□□ 0.22
TOP1MT-217ENST00000523417 TMEM88BA6NKF7 163 aa16.43■□□□□ 0.22
TOP1MT-217ENST00000523417 GRAPQ13588 217 aa16.43■□□□□ 0.22
TOP1MT-217ENST00000523417 CNTROBQ8N137 903 aa16.43■□□□□ 0.22
TOP1MT-217ENST00000523417 GRAPLQ8TC17 118 aaPredicted RBP16.43■□□□□ 0.22
TOP1MT-217ENST00000523417 SCNN1DP51172 638 aa16.42■□□□□ 0.22
TOP1MT-217ENST00000523417 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
TOP1MT-217ENST00000523417 EAPPQ56P03 285 aaPredicted RBP16.42■□□□□ 0.22
TOP1MT-217ENST00000523417 USP50Q70EL3 339 aaPredicted RBP16.42■□□□□ 0.22
TOP1MT-217ENST00000523417 NIM1KQ8IY84 436 aa16.42■□□□□ 0.22
TOP1MT-217ENST00000523417 MPNDQ8N594 471 aa16.42■□□□□ 0.22
TOP1MT-217ENST00000523417 ZNRF3Q9ULT6 936 aa16.42■□□□□ 0.22
TOP1MT-217ENST00000523417 CACNA1SQ13698 1873 aa16.42■□□□□ 0.22
TOP1MT-217ENST00000523417 COL4A5P29400 1685 aa16.41■□□□□ 0.22
TOP1MT-217ENST00000523417 TCERG1O14776 1098 aaKnown RBP16.41■□□□□ 0.22
TOP1MT-217ENST00000523417 PPIP5K2O43314 1243 aa16.41■□□□□ 0.22
TOP1MT-217ENST00000523417 EPS15P42566 896 aa16.41■□□□□ 0.22
TOP1MT-217ENST00000523417 KIAA2012Q0VF49 1180 aa16.41■□□□□ 0.22
TOP1MT-217ENST00000523417 COL13A1Q5TAT6 717 aaPredicted RBP16.41■□□□□ 0.22
TOP1MT-217ENST00000523417 DPP8Q6V1X1 898 aaPredicted RBP16.41■□□□□ 0.22
TOP1MT-217ENST00000523417 CLEC11AQ9Y240 323 aa16.41■□□□□ 0.22
TOP1MT-217ENST00000523417 CNTNAP1P78357 1384 aa16.4■□□□□ 0.22
TOP1MT-217ENST00000523417 LMOD1P29536 600 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms