RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 NTSR2O95665 410 aa14.15□□□□□ -0.14
PVT1-216ENST00000523068 AIMP1Q12904 312 aaKnown RBP14.15□□□□□ -0.14
PVT1-216ENST00000523068 KRT24Q2M2I5 525 aa14.15□□□□□ -0.14
PVT1-216ENST00000523068 RTKN2Q8IZC4 609 aa14.15□□□□□ -0.14
PVT1-216ENST00000523068 XAGE3Q8WTP9 111 aa14.15□□□□□ -0.14
PVT1-216ENST00000523068 C7orf43Q8WVR3 580 aa14.15□□□□□ -0.14
PVT1-216ENST00000523068 MBIPQ9NS73 344 aa14.15□□□□□ -0.14
PVT1-216ENST00000523068 CHPF2Q9P2E5 772 aa14.15□□□□□ -0.14
PVT1-216ENST00000523068 DBF4Q9UBU7 674 aaPredicted RBP14.15□□□□□ -0.14
PVT1-216ENST00000523068 WDR90Q96KV7 1748 aa14.15□□□□□ -0.14
PVT1-216ENST00000523068 ZNF853P0CG23 659 aa14.14□□□□□ -0.15
PVT1-216ENST00000523068 UTP14AQ9BVJ6 771 aaKnown RBP14.14□□□□□ -0.15
PVT1-216ENST00000523068 CHMP4AQ9BY43 222 aa14.14□□□□□ -0.15
PVT1-216ENST00000523068 LAMB2P55268 1798 aa14.14□□□□□ -0.15
PVT1-216ENST00000523068 VEGFAP15692 232 aaPredicted RBP14.13□□□□□ -0.15
PVT1-216ENST00000523068 HOXA10P31260 410 aaPredicted RBP14.13□□□□□ -0.15
PVT1-216ENST00000523068 FKBP4Q02790 459 aaKnown RBP eCLIP14.13□□□□□ -0.15
PVT1-216ENST00000523068 FSTL1Q12841 308 aa14.13□□□□□ -0.15
PVT1-216ENST00000523068 DUSP27Q5VZP5 1158 aa14.13□□□□□ -0.15
PVT1-216ENST00000523068 CC2D2BQ6DHV5 1058 aa14.13□□□□□ -0.15
PVT1-216ENST00000523068 RBM17Q96I25 401 aaKnown RBP14.13□□□□□ -0.15
PVT1-216ENST00000523068 NLRP3Q96P20 1036 aa14.13□□□□□ -0.15
PVT1-216ENST00000523068 HYPKQ9NX55 129 aa14.13□□□□□ -0.15
PVT1-216ENST00000523068 TCIRG1Q13488 830 aa14.12□□□□□ -0.15
PVT1-216ENST00000523068 GRIPAP1Q4V328 841 aa14.12□□□□□ -0.15
PVT1-216ENST00000523068 ANKRD13DQ6ZTN6 518 aa14.12□□□□□ -0.15
PVT1-216ENST00000523068 APLP1P51693 650 aa14.11□□□□□ -0.15
PVT1-216ENST00000523068 CCDC184Q52MB2 194 aa14.11□□□□□ -0.15
PVT1-216ENST00000523068 SLC10A5Q5PT55 438 aa14.11□□□□□ -0.15
PVT1-216ENST00000523068 NLRP10Q86W26 655 aa14.11□□□□□ -0.15
PVT1-216ENST00000523068 PLBD2Q8NHP8 589 aa14.11□□□□□ -0.15
PVT1-216ENST00000523068 CRAMP1Q96RY5 1269 aa14.11□□□□□ -0.15
PVT1-216ENST00000523068 MRS2Q9HD23 443 aa14.11□□□□□ -0.15
PVT1-216ENST00000523068 SCN4AP35499 1836 aa14.11□□□□□ -0.15
PVT1-216ENST00000523068 CCDC27Q2M243 656 aa14.1□□□□□ -0.15
PVT1-216ENST00000523068 SMC1BQ8NDV3 1235 aa14.1□□□□□ -0.15
PVT1-216ENST00000523068 TMX4Q9H1E5 349 aaPredicted RBP14.1□□□□□ -0.15
PVT1-216ENST00000523068 TRMT112Q9UI30 125 aaKnown RBP14.1□□□□□ -0.15
PVT1-216ENST00000523068 SH3TC1Q8TE82 1336 aa14.1□□□□□ -0.15
PVT1-216ENST00000523068 DDX60Q8IY21 1712 aaKnown RBP14.1□□□□□ -0.15
PVT1-216ENST00000523068 NCBP3Q53F19 620 aaKnown RBP14.09□□□□□ -0.15
PVT1-216ENST00000523068 SYNE4Q8N205 404 aa14.09□□□□□ -0.15
PVT1-216ENST00000523068 PSMD1Q99460 953 aa14.09□□□□□ -0.15
PVT1-216ENST00000523068 ZNF277Q9NRM2 450 aaPredicted RBP14.09□□□□□ -0.15
PVT1-216ENST00000523068 CEP350Q5VT06 3117 aa14.09□□□□□ -0.15
PVT1-216ENST00000523068 PPEF1O14829 653 aaPredicted RBP14.08□□□□□ -0.16
PVT1-216ENST00000523068 IARSP41252 1262 aaKnown RBP14.08□□□□□ -0.16
PVT1-216ENST00000523068 DIEXFQ68CQ4 756 aaKnown RBP14.08□□□□□ -0.16
PVT1-216ENST00000523068 OLFM4Q6UX06 510 aa14.08□□□□□ -0.16
PVT1-216ENST00000523068 SNED1Q8TER0 1413 aa14.07□□□□□ -0.16
PVT1-216ENST00000523068 ELL2O00472 640 aaPredicted RBP14.07□□□□□ -0.16
PVT1-216ENST00000523068 GOLGA2Q08379 1002 aa14.07□□□□□ -0.16
PVT1-216ENST00000523068 CCDC30Q5VVM6 783 aa14.07□□□□□ -0.16
PVT1-216ENST00000523068 WWC1Q8IX03 1113 aa14.07□□□□□ -0.16
PVT1-216ENST00000523068 JDP2Q8WYK2 163 aa14.07□□□□□ -0.16
PVT1-216ENST00000523068 CACNA1FO60840 1977 aa14.07□□□□□ -0.16
PVT1-216ENST00000523068 IQCA1LA6NCM1 817 aa14.06□□□□□ -0.16
PVT1-216ENST00000523068 DDNO94850 711 aaPredicted RBP14.06□□□□□ -0.16
PVT1-216ENST00000523068 C3orf67Q6ZVT6 689 aa14.06□□□□□ -0.16
PVT1-216ENST00000523068 DDX46Q7L014 1031 aaKnown RBP14.06□□□□□ -0.16
PVT1-216ENST00000523068 RIC3Q7Z5B4 369 aa14.06□□□□□ -0.16
PVT1-216ENST00000523068 C8orf58Q8NAV2 365 aa14.06□□□□□ -0.16
PVT1-216ENST00000523068 ISCA1Q9BUE6 129 aa14.06□□□□□ -0.16
PVT1-216ENST00000523068 ABCC4O15439 1325 aa14.06□□□□□ -0.16
PVT1-216ENST00000523068 IL16Q14005 1332 aa14.06□□□□□ -0.16
PVT1-216ENST00000523068 TAF1P21675 1872 aa14.06□□□□□ -0.16
PVT1-216ENST00000523068 POTECB2RU33 542 aa14.05□□□□□ -0.16
PVT1-216ENST00000523068 BBOX1O75936 387 aa14.05□□□□□ -0.16
PVT1-216ENST00000523068 DDX58O95786 925 aaKnown RBP14.05□□□□□ -0.16
PVT1-216ENST00000523068 HCLS1P14317 486 aaPredicted RBP14.05□□□□□ -0.16
PVT1-216ENST00000523068 TRIM28Q13263 835 aaKnown RBP14.05□□□□□ -0.16
PVT1-216ENST00000523068 L3MBTL3Q96JM7 780 aaPredicted RBP14.05□□□□□ -0.16
PVT1-216ENST00000523068 ATP6V0A2Q9Y487 856 aa14.05□□□□□ -0.16
PVT1-216ENST00000523068 ATP5J2-PTCD1G3V325 749 aa14.04□□□□□ -0.16
PVT1-216ENST00000523068 FZD9O00144 591 aa14.04□□□□□ -0.16
PVT1-216ENST00000523068 TCERG1O14776 1098 aaKnown RBP14.04□□□□□ -0.16
PVT1-216ENST00000523068 HSP90B1P14625 803 aaKnown RBP14.04□□□□□ -0.16
PVT1-216ENST00000523068 TMC4Q7Z404 712 aa14.04□□□□□ -0.16
PVT1-216ENST00000523068 PHAXQ9H814 394 aaKnown RBP14.04□□□□□ -0.16
PVT1-216ENST00000523068 SP8Q8IXZ3 490 aa14.03□□□□□ -0.16
PVT1-216ENST00000523068 SUPT20HQ8NEM7 779 aa14.03□□□□□ -0.16
PVT1-216ENST00000523068 TSR2Q969E8 191 aaKnown RBP14.03□□□□□ -0.16
PVT1-216ENST00000523068 FAM89AQ96GI7 184 aa14.03□□□□□ -0.16
PVT1-216ENST00000523068 STK31Q9BXU1 1019 aa14.03□□□□□ -0.16
PVT1-216ENST00000523068 VPS33BQ9H267 617 aa14.03□□□□□ -0.16
PVT1-216ENST00000523068 LRRC37AA6NMS7 1700 aa14.02□□□□□ -0.16
PVT1-216ENST00000523068 ZNF541Q9H0D2 1346 aa14.02□□□□□ -0.17
PVT1-216ENST00000523068 EIF6P56537 245 aaKnown RBP14.02□□□□□ -0.17
PVT1-216ENST00000523068 GRAPQ13588 217 aa14.02□□□□□ -0.17
PVT1-216ENST00000523068 GPC2Q8N158 579 aa14.02□□□□□ -0.17
PVT1-216ENST00000523068 LARGE2Q8N3Y3 721 aa14.02□□□□□ -0.17
PVT1-216ENST00000523068 GRAPLQ8TC17 118 aaPredicted RBP14.02□□□□□ -0.17
PVT1-216ENST00000523068 SF3B3Q15393 1217 aaKnown RBP14.01□□□□□ -0.17
PVT1-216ENST00000523068 TWISTNBQ3B726 338 aaPredicted RBP14.01□□□□□ -0.17
PVT1-216ENST00000523068 WDR63Q8IWG1 891 aa14.01□□□□□ -0.17
PVT1-216ENST00000523068 NIM1KQ8IY84 436 aa14.01□□□□□ -0.17
PVT1-216ENST00000523068 TSPYL6Q8N831 410 aa14.01□□□□□ -0.17
PVT1-216ENST00000523068 ZBTB38Q8NAP3 1195 aaPredicted RBP14.01□□□□□ -0.17
PVT1-216ENST00000523068 CCDC191Q8NCU4 936 aa14.01□□□□□ -0.17
PVT1-216ENST00000523068 MYD88Q99836 296 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms