RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 STK31Q9BXU1 1019 aa21.1■□□□□ 0.97
PABPC1-221ENST00000522720 MYH16Q9H6N6 1097 aa21.1■□□□□ 0.97
PABPC1-221ENST00000522720 RNF123Q5XPI4 1314 aa21.09■□□□□ 0.97
PABPC1-221ENST00000522720 EXOSC9Q06265 439 aaKnown RBP21.09■□□□□ 0.97
PABPC1-221ENST00000522720 PRPF40BQ6NWY9 871 aaKnown RBP21.09■□□□□ 0.97
PABPC1-221ENST00000522720 RIC3Q7Z5B4 369 aa21.09■□□□□ 0.97
PABPC1-221ENST00000522720 ISCA1Q9BUE6 129 aa21.09■□□□□ 0.97
PABPC1-221ENST00000522720 ARFGEF2Q9Y6D5 1785 aa21.08■□□□□ 0.97
PABPC1-221ENST00000522720 C21orf2O43822 256 aa21.08■□□□□ 0.97
PABPC1-221ENST00000522720 VAMP4O75379 141 aa21.08■□□□□ 0.97
PABPC1-221ENST00000522720 SBF1O95248 1867 aa21.08■□□□□ 0.97
PABPC1-221ENST00000522720 TRIM28Q13263 835 aaKnown RBP21.08■□□□□ 0.97
PABPC1-221ENST00000522720 TNRC6CQ9HCJ0 1690 aaKnown RBP21.08■□□□□ 0.96
PABPC1-221ENST00000522720 CACNA1SQ13698 1873 aa21.07■□□□□ 0.96
PABPC1-221ENST00000522720 CACNA1FO60840 1977 aa21.07■□□□□ 0.96
PABPC1-221ENST00000522720 TCERG1O14776 1098 aaKnown RBP21.07■□□□□ 0.96
PABPC1-221ENST00000522720 C7orf43Q8WVR3 580 aa21.07■□□□□ 0.96
PABPC1-221ENST00000522720 TRMT112Q9UI30 125 aaKnown RBP21.07■□□□□ 0.96
PABPC1-221ENST00000522720 ATP5J2-PTCD1G3V325 749 aa21.06■□□□□ 0.96
PABPC1-221ENST00000522720 DDX58O95786 925 aaKnown RBP21.06■□□□□ 0.96
PABPC1-221ENST00000522720 SLC4A2P04920 1241 aa21.06■□□□□ 0.96
PABPC1-221ENST00000522720 ALDH1B1P30837 517 aa21.06■□□□□ 0.96
PABPC1-221ENST00000522720 C9orf131Q5VYM1 1079 aa21.06■□□□□ 0.96
PABPC1-221ENST00000522720 MIER1Q8N108 512 aa21.06■□□□□ 0.96
PABPC1-221ENST00000522720 NLRP3Q96P20 1036 aa21.06■□□□□ 0.96
PABPC1-221ENST00000522720 ZNF219Q9P2Y4 722 aaPredicted RBP21.06■□□□□ 0.96
PABPC1-221ENST00000522720 SH3TC1Q8TE82 1336 aa21.05■□□□□ 0.96
PABPC1-221ENST00000522720 HOXA10P31260 410 aaPredicted RBP21.05■□□□□ 0.96
PABPC1-221ENST00000522720 NFKBIEO00221 500 aa21.04■□□□□ 0.96
PABPC1-221ENST00000522720 RASSF7Q02833 373 aa21.04■□□□□ 0.96
PABPC1-221ENST00000522720 SOGA3Q5TF21 947 aa21.04■□□□□ 0.96
PABPC1-221ENST00000522720 C3orf67Q6ZVT6 689 aa21.04■□□□□ 0.96
PABPC1-221ENST00000522720 SYNE4Q8N205 404 aa21.04■□□□□ 0.96
PABPC1-221ENST00000522720 RPGRQ92834 1020 aaKnown RBP21.04■□□□□ 0.96
PABPC1-221ENST00000522720 FER1L6Q2WGJ9 1857 aa21.04■□□□□ 0.96
PABPC1-221ENST00000522720 KSR2Q6VAB6 950 aa21.03■□□□□ 0.96
PABPC1-221ENST00000522720 G2E3Q7L622 706 aa21.03■□□□□ 0.96
PABPC1-221ENST00000522720 METTL22Q9BUU2 404 aaPredicted RBP21.03■□□□□ 0.96
PABPC1-221ENST00000522720 RNF181Q9P0P0 153 aa21.03■□□□□ 0.96
PABPC1-221ENST00000522720 PI4KAP2A4QPH2 592 aa21.02■□□□□ 0.96
PABPC1-221ENST00000522720 HCLS1P14317 486 aaPredicted RBP21.02■□□□□ 0.96
PABPC1-221ENST00000522720 LMNB1P20700 586 aa21.02■□□□□ 0.96
PABPC1-221ENST00000522720 PI4KAP1Q8N8J0 262 aa21.02■□□□□ 0.96
PABPC1-221ENST00000522720 RBM17Q96I25 401 aaKnown RBP21.02■□□□□ 0.96
PABPC1-221ENST00000522720 CRAMP1Q96RY5 1269 aa21.02■□□□□ 0.96
PABPC1-221ENST00000522720 MYD88Q99836 296 aa21.02■□□□□ 0.96
PABPC1-221ENST00000522720 CCDC88AQ3V6T2 1871 aa21.02■□□□□ 0.96
PABPC1-221ENST00000522720 E9PSI1 815 aa21.01■□□□□ 0.95
PABPC1-221ENST00000522720 PRELPP51888 382 aa21.01■□□□□ 0.95
PABPC1-221ENST00000522720 CCDC191Q8NCU4 936 aa21.01■□□□□ 0.95
PABPC1-221ENST00000522720 ZNF428Q96B54 188 aa21.01■□□□□ 0.95
PABPC1-221ENST00000522720 FAM89AQ96GI7 184 aa21.01■□□□□ 0.95
PABPC1-221ENST00000522720 MAP3K2Q9Y2U5 619 aa21.01■□□□□ 0.95
PABPC1-221ENST00000522720 LTBP3Q9NS15 1303 aa21.01■□□□□ 0.95
PABPC1-221ENST00000522720 CCDC93Q567U6 631 aa21■□□□□ 0.95
PABPC1-221ENST00000522720 SLFN5Q08AF3 891 aa20.99■□□□□ 0.95
PABPC1-221ENST00000522720 FLIIQ13045 1269 aa20.99■□□□□ 0.95
PABPC1-221ENST00000522720 ZNF526Q8TF50 670 aaPredicted RBP20.99■□□□□ 0.95
PABPC1-221ENST00000522720 TAOK3Q9H2K8 898 aa20.99■□□□□ 0.95
PABPC1-221ENST00000522720 GPBP1L1Q9HC44 474 aaPredicted RBP20.99■□□□□ 0.95
PABPC1-221ENST00000522720 LAMB2P55268 1798 aa20.99■□□□□ 0.95
PABPC1-221ENST00000522720 ZBTB38Q8NAP3 1195 aaPredicted RBP20.98■□□□□ 0.95
PABPC1-221ENST00000522720 CWC25Q9NXE8 425 aaPredicted RBP20.98■□□□□ 0.95
PABPC1-221ENST00000522720 CC2D2BQ6DHV5 1058 aa20.97■□□□□ 0.95
PABPC1-221ENST00000522720 OLFM4Q6UX06 510 aa20.97■□□□□ 0.95
PABPC1-221ENST00000522720 RTKN2Q8IZC4 609 aa20.97■□□□□ 0.95
PABPC1-221ENST00000522720 DDX60Q8IY21 1712 aaKnown RBP20.97■□□□□ 0.95
PABPC1-221ENST00000522720 ZC3H4Q9UPT8 1303 aaKnown RBP20.97■□□□□ 0.95
PABPC1-221ENST00000522720 IGKV5-2P06315 115 aa20.96■□□□□ 0.95
PABPC1-221ENST00000522720 NEXNQ0ZGT2 675 aa20.96■□□□□ 0.95
PABPC1-221ENST00000522720 FKBP5Q13451 457 aaPredicted RBP20.96■□□□□ 0.95
PABPC1-221ENST00000522720 RTL5Q5HYW3 569 aaPredicted RBP20.96■□□□□ 0.95
PABPC1-221ENST00000522720 DICER1Q9UPY3 1922 aaKnown RBP20.96■□□□□ 0.95
PABPC1-221ENST00000522720 IRS4O14654 1257 aaPredicted RBP20.95■□□□□ 0.94
PABPC1-221ENST00000522720 PCCAP05165 728 aaPredicted RBP20.95■□□□□ 0.94
PABPC1-221ENST00000522720 SF3B3Q15393 1217 aaKnown RBP20.95■□□□□ 0.94
PABPC1-221ENST00000522720 CDCA7LQ96GN5 454 aa20.95■□□□□ 0.94
PABPC1-221ENST00000522720 PPEF1O14829 653 aaPredicted RBP20.94■□□□□ 0.94
PABPC1-221ENST00000522720 BBOX1O75936 387 aa20.94■□□□□ 0.94
PABPC1-221ENST00000522720 HSP90B1P14625 803 aaKnown RBP20.94■□□□□ 0.94
PABPC1-221ENST00000522720 FKBP4Q02790 459 aaKnown RBP eCLIP20.94■□□□□ 0.94
PABPC1-221ENST00000522720 DDX46Q7L014 1031 aaKnown RBP20.94■□□□□ 0.94
PABPC1-221ENST00000522720 TRMT2AQ8IZ69 625 aaKnown RBP20.94■□□□□ 0.94
PABPC1-221ENST00000522720 ABCC4O15439 1325 aa20.94■□□□□ 0.94
PABPC1-221ENST00000522720 GRIPAP1Q4V328 841 aa20.93■□□□□ 0.94
PABPC1-221ENST00000522720 DNAAF4Q8WXU2 420 aa20.93■□□□□ 0.94
PABPC1-221ENST00000522720 SNED1Q8TER0 1413 aa20.93■□□□□ 0.94
PABPC1-221ENST00000522720 NEURL1BA8MQ27 555 aa20.92■□□□□ 0.94
PABPC1-221ENST00000522720 ATP6V0A2Q9Y487 856 aa20.92■□□□□ 0.94
PABPC1-221ENST00000522720 TAF1P21675 1872 aa20.91■□□□□ 0.94
PABPC1-221ENST00000522720 GRAPQ13588 217 aa20.91■□□□□ 0.94
PABPC1-221ENST00000522720 CWF19L2Q2TBE0 894 aaKnown RBP20.91■□□□□ 0.94
PABPC1-221ENST00000522720 KDM2BQ8NHM5 1336 aa20.91■□□□□ 0.94
PABPC1-221ENST00000522720 GRAPLQ8TC17 118 aaPredicted RBP20.91■□□□□ 0.94
PABPC1-221ENST00000522720 JARID2Q92833 1246 aaPredicted RBP20.91■□□□□ 0.94
PABPC1-221ENST00000522720 PSMD1Q99460 953 aa20.91■□□□□ 0.94
PABPC1-221ENST00000522720 LINS1Q8NG48 757 aa20.9■□□□□ 0.94
PABPC1-221ENST00000522720 TMX4Q9H1E5 349 aaPredicted RBP20.9■□□□□ 0.94
PABPC1-221ENST00000522720 ZNF277Q9NRM2 450 aaPredicted RBP20.9■□□□□ 0.94
PABPC1-221ENST00000522720 CDHR2Q9BYE9 1310 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms