RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
MRPS28-207ENST00000521434 CYP4F22Q6NT55 531 aa12□□□□□ -0.49
MRPS28-207ENST00000521434 TPTE2Q6XPS3 522 aa12□□□□□ -0.49
MRPS28-207ENST00000521434 JDP2Q8WYK2 163 aa12□□□□□ -0.49
MRPS28-207ENST00000521434 MAP2K2P36507 400 aa11.99□□□□□ -0.49
MRPS28-207ENST00000521434 EIF6P56537 245 aaKnown RBP11.99□□□□□ -0.49
MRPS28-207ENST00000521434 GRM1Q13255 1194 aa11.99□□□□□ -0.49
MRPS28-207ENST00000521434 GAS2L2Q8NHY3 880 aa11.99□□□□□ -0.49
MRPS28-207ENST00000521434 PSMD1Q99460 953 aa11.99□□□□□ -0.49
MRPS28-207ENST00000521434 GJA3Q9Y6H8 435 aa11.99□□□□□ -0.49
MRPS28-207ENST00000521434 SNED1Q8TER0 1413 aa11.98□□□□□ -0.49
MRPS28-207ENST00000521434 RGL2O15211 777 aa11.98□□□□□ -0.49
MRPS28-207ENST00000521434 CA12O43570 354 aa11.98□□□□□ -0.49
MRPS28-207ENST00000521434 HSPA5P11021 654 aaKnown RBP11.98□□□□□ -0.49
MRPS28-207ENST00000521434 FMR1Q06787 632 aaKnown RBP eCLIP11.98□□□□□ -0.49
MRPS28-207ENST00000521434 CST9Q5W186 159 aa11.98□□□□□ -0.49
MRPS28-207ENST00000521434 TSKSQ9UJT2 592 aa11.98□□□□□ -0.49
MRPS28-207ENST00000521434 NIP7Q9Y221 180 aaKnown RBP eCLIP11.98□□□□□ -0.49
MRPS28-207ENST00000521434 USP16Q9Y5T5 823 aa11.98□□□□□ -0.49
MRPS28-207ENST00000521434 TLL2Q9Y6L7 1015 aa11.98□□□□□ -0.49
MRPS28-207ENST00000521434 COL4A5P29400 1685 aa11.97□□□□□ -0.49
MRPS28-207ENST00000521434 CEMIPQ8WUJ3 1361 aa11.97□□□□□ -0.49
MRPS28-207ENST00000521434 KCNQ3O43525 872 aa11.97□□□□□ -0.49
MRPS28-207ENST00000521434 PIP4K2AP48426 406 aaPredicted RBP11.97□□□□□ -0.49
MRPS28-207ENST00000521434 SCNN1DP51172 638 aa11.97□□□□□ -0.49
MRPS28-207ENST00000521434 CFAP44Q96MT7 982 aa11.97□□□□□ -0.49
MRPS28-207ENST00000521434 NUP98P52948 1817 aa11.96□□□□□ -0.49
MRPS28-207ENST00000521434 BTBD11A6QL63 1104 aa11.96□□□□□ -0.49
MRPS28-207ENST00000521434 TRAF5O00463 557 aa11.96□□□□□ -0.49
MRPS28-207ENST00000521434 AOC2O75106 756 aa11.96□□□□□ -0.49
MRPS28-207ENST00000521434 EPS15P42566 896 aa11.96□□□□□ -0.49
MRPS28-207ENST00000521434 CC2D2BQ6DHV5 1058 aa11.96□□□□□ -0.49
MRPS28-207ENST00000521434 USP50Q70EL3 339 aaPredicted RBP11.96□□□□□ -0.49
MRPS28-207ENST00000521434 MCOLN1Q9GZU1 580 aa11.96□□□□□ -0.49
MRPS28-207ENST00000521434 FAM177BA6PVY3 158 aa11.95□□□□□ -0.5
MRPS28-207ENST00000521434 GTF2E1P29083 439 aaPredicted RBP11.95□□□□□ -0.5
MRPS28-207ENST00000521434 PRAMEF22A3QJZ6 481 aa11.94□□□□□ -0.5
MRPS28-207ENST00000521434 SNRPA1P09661 255 aaKnown RBP11.94□□□□□ -0.5
MRPS28-207ENST00000521434 BRPF1P55201 1214 aaPredicted RBP11.94□□□□□ -0.5
MRPS28-207ENST00000521434 CRY2Q49AN0 593 aa11.94□□□□□ -0.5
MRPS28-207ENST00000521434 GRIPAP1Q4V328 841 aa11.94□□□□□ -0.5
MRPS28-207ENST00000521434 SAPCD2Q86UD0 394 aa11.94□□□□□ -0.5
MRPS28-207ENST00000521434 REM2Q8IYK8 340 aaPredicted RBP11.94□□□□□ -0.5
MRPS28-207ENST00000521434 LARGE2Q8N3Y3 721 aa11.94□□□□□ -0.5
MRPS28-207ENST00000521434 HHIPL1Q96JK4 782 aa11.94□□□□□ -0.5
MRPS28-207ENST00000521434 COL3A1P02461 1466 aaPredicted RBP11.94□□□□□ -0.5
MRPS28-207ENST00000521434 NBPF26B4DH59 902 aa11.93□□□□□ -0.5
MRPS28-207ENST00000521434 U2SURPO15042 1029 aaKnown RBP11.93□□□□□ -0.5
MRPS28-207ENST00000521434 DGKZQ13574 1117 aa11.93□□□□□ -0.5
MRPS28-207ENST00000521434 NBPF10Q6P3W6 841 aaKnown RBP11.93□□□□□ -0.5
MRPS28-207ENST00000521434 NBPF15Q8N660 670 aa11.93□□□□□ -0.5
MRPS28-207ENST00000521434 ADARB2Q9NS39 739 aaKnown RBP11.93□□□□□ -0.5
MRPS28-207ENST00000521434 CELF2O95319 508 aaKnown RBP11.92□□□□□ -0.5
MRPS28-207ENST00000521434 HLFQ16534 295 aa11.92□□□□□ -0.5
MRPS28-207ENST00000521434 NIM1KQ8IY84 436 aa11.92□□□□□ -0.5
MRPS28-207ENST00000521434 RPGRQ92834 1020 aaKnown RBP11.92□□□□□ -0.5
MRPS28-207ENST00000521434 NYXQ9GZU5 481 aa11.92□□□□□ -0.5
MRPS28-207ENST00000521434 LAMB4A4D0S4 1761 aa11.92□□□□□ -0.5
MRPS28-207ENST00000521434 ABCC12Q96J65 1359 aa11.92□□□□□ -0.5
MRPS28-207ENST00000521434 HOXA10P31260 410 aaPredicted RBP11.91□□□□□ -0.5
MRPS28-207ENST00000521434 GPRC5DQ9NZD1 345 aa11.91□□□□□ -0.5
MRPS28-207ENST00000521434 AKAP11Q9UKA4 1901 aa11.9□□□□□ -0.5
MRPS28-207ENST00000521434 RIC1Q4ADV7 1423 aa11.9□□□□□ -0.5
MRPS28-207ENST00000521434 CC2D1BQ5T0F9 858 aaKnown RBP11.9□□□□□ -0.5
MRPS28-207ENST00000521434 CIAPIN1Q6FI81 312 aa11.9□□□□□ -0.5
MRPS28-207ENST00000521434 NUTM1Q86Y26 1132 aa11.9□□□□□ -0.5
MRPS28-207ENST00000521434 PHACTR3Q96KR7 559 aa11.9□□□□□ -0.5
MRPS28-207ENST00000521434 POLR2AP24928 1970 aaKnown RBP11.9□□□□□ -0.5
MRPS28-207ENST00000521434 KIF7Q2M1P5 1343 aa11.89□□□□□ -0.51
MRPS28-207ENST00000521434 CLSPNQ9HAW4 1339 aa11.89□□□□□ -0.51
MRPS28-207ENST00000521434 PPIP5K2O43314 1243 aa11.89□□□□□ -0.51
MRPS28-207ENST00000521434 CRAMP1Q96RY5 1269 aa11.89□□□□□ -0.51
MRPS28-207ENST00000521434 GLIS2Q9BZE0 524 aaPredicted RBP11.89□□□□□ -0.51
MRPS28-207ENST00000521434 VPS33BQ9H267 617 aa11.89□□□□□ -0.51
MRPS28-207ENST00000521434 PGAP2Q9UHJ9 254 aa11.89□□□□□ -0.51
MRPS28-207ENST00000521434 ERVV-1B6SEH8 477 aa11.88□□□□□ -0.51
MRPS28-207ENST00000521434 PPEF1O14829 653 aaPredicted RBP11.88□□□□□ -0.51
MRPS28-207ENST00000521434 PER1O15534 1290 aaPredicted RBP11.88□□□□□ -0.51
MRPS28-207ENST00000521434 PRKAR2BP31323 418 aa11.88□□□□□ -0.51
MRPS28-207ENST00000521434 CXCL9Q07325 125 aa11.88□□□□□ -0.51
MRPS28-207ENST00000521434 NOGQ13253 232 aa11.88□□□□□ -0.51
MRPS28-207ENST00000521434 PIP4P2Q8N4L2 257 aa11.88□□□□□ -0.51
MRPS28-207ENST00000521434 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
MRPS28-207ENST00000521434 ZC3H15Q8WU90 426 aaKnown RBP11.88□□□□□ -0.51
MRPS28-207ENST00000521434 RTF1Q92541 710 aaKnown RBP11.88□□□□□ -0.51
MRPS28-207ENST00000521434 RBM17Q96I25 401 aaKnown RBP11.88□□□□□ -0.51
MRPS28-207ENST00000521434 ZNF408Q9H9D4 720 aa11.88□□□□□ -0.51
MRPS28-207ENST00000521434 ZNRF3Q9ULT6 936 aa11.88□□□□□ -0.51
MRPS28-207ENST00000521434 IBTKQ9P2D0 1353 aaPredicted RBP11.88□□□□□ -0.51
MRPS28-207ENST00000521434 NPC1L1Q9UHC9 1359 aa11.88□□□□□ -0.51
MRPS28-207ENST00000521434 CDHR2Q9BYE9 1310 aa11.87□□□□□ -0.51
MRPS28-207ENST00000521434 TCERG1O14776 1098 aaKnown RBP11.87□□□□□ -0.51
MRPS28-207ENST00000521434 AOC3Q16853 763 aa11.87□□□□□ -0.51
MRPS28-207ENST00000521434 CDC37L1Q7L3B6 337 aa11.87□□□□□ -0.51
MRPS28-207ENST00000521434 MCM10Q7L590 875 aa11.87□□□□□ -0.51
MRPS28-207ENST00000521434 SLC51AQ86UW1 340 aa11.87□□□□□ -0.51
MRPS28-207ENST00000521434 RSPH6AQ9H0K4 717 aa11.87□□□□□ -0.51
MRPS28-207ENST00000521434 TMX4Q9H1E5 349 aaPredicted RBP11.87□□□□□ -0.51
MRPS28-207ENST00000521434 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
MRPS28-207ENST00000521434 GMPSP49915 693 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms