RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 UBR1Q8IWV7 1749 aa20.91■□□□□ 0.94
TRAM1-205ENST00000521425 PXDNQ92626 1479 aa20.9■□□□□ 0.94
TRAM1-205ENST00000521425 IFNL2Q8IZJ0 200 aa20.9■□□□□ 0.94
TRAM1-205ENST00000521425 HYPKQ9NX55 129 aa20.9■□□□□ 0.94
TRAM1-205ENST00000521425 GOLIM4O00461 696 aa20.89■□□□□ 0.94
TRAM1-205ENST00000521425 LINS1Q8NG48 757 aa20.89■□□□□ 0.94
TRAM1-205ENST00000521425 DDX21Q9NR30 783 aaKnown RBP eCLIP20.89■□□□□ 0.94
TRAM1-205ENST00000521425 TMEM94Q12767 1356 aa20.89■□□□□ 0.94
TRAM1-205ENST00000521425 HAND2P61296 217 aa20.89■□□□□ 0.93
TRAM1-205ENST00000521425 USP48Q86UV5 1035 aa20.89■□□□□ 0.93
TRAM1-205ENST00000521425 IGSF3O75054 1194 aa20.89■□□□□ 0.93
TRAM1-205ENST00000521425 ZNF589Q86UQ0 364 aaPredicted RBP20.89■□□□□ 0.93
TRAM1-205ENST00000521425 SLC52A2Q9HAB3 445 aa20.89■□□□□ 0.93
TRAM1-205ENST00000521425 ANKRD26Q9UPS8 1709 aa20.89■□□□□ 0.93
TRAM1-205ENST00000521425 HSP90AB4PQ58FF6 505 aa20.88■□□□□ 0.93
TRAM1-205ENST00000521425 LARP1Q6PKG0 1096 aaKnown RBP20.88■□□□□ 0.93
TRAM1-205ENST00000521425 KAZALD1Q96I82 304 aa20.88■□□□□ 0.93
TRAM1-205ENST00000521425 NPHP3Q7Z494 1330 aa20.88■□□□□ 0.93
TRAM1-205ENST00000521425 GJB2P29033 226 aa20.88■□□□□ 0.93
TRAM1-205ENST00000521425 KLHL40Q2TBA0 621 aa20.88■□□□□ 0.93
TRAM1-205ENST00000521425 PHKG2P15735 406 aa20.88■□□□□ 0.93
TRAM1-205ENST00000521425 DNM1Q05193 864 aaKnown RBP20.88■□□□□ 0.93
TRAM1-205ENST00000521425 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.88■□□□□ 0.93
TRAM1-205ENST00000521425 RUFY3Q7L099 469 aa20.87■□□□□ 0.93
TRAM1-205ENST00000521425 CYP46A1Q9Y6A2 500 aa20.87■□□□□ 0.93
TRAM1-205ENST00000521425 CCT2P78371 535 aaKnown RBP20.86■□□□□ 0.93
TRAM1-205ENST00000521425 RUFY2Q8WXA3 655 aa20.86■□□□□ 0.93
TRAM1-205ENST00000521425 FAM89AQ96GI7 184 aa20.86■□□□□ 0.93
TRAM1-205ENST00000521425 CBX1P83916 185 aa20.86■□□□□ 0.93
TRAM1-205ENST00000521425 GCKRQ14397 625 aa20.86■□□□□ 0.93
TRAM1-205ENST00000521425 OSBPL3Q9H4L5 887 aa20.86■□□□□ 0.93
TRAM1-205ENST00000521425 KIF13AQ9H1H9 1805 aa20.86■□□□□ 0.93
TRAM1-205ENST00000521425 NEURL1BA8MQ27 555 aa20.86■□□□□ 0.93
TRAM1-205ENST00000521425 WASHC4Q2M389 1173 aa20.86■□□□□ 0.93
TRAM1-205ENST00000521425 C3P01024 1663 aa20.85■□□□□ 0.93
TRAM1-205ENST00000521425 GIMAP6Q6P9H5 292 aa20.85■□□□□ 0.93
TRAM1-205ENST00000521425 CWC22Q9HCG8 908 aaKnown RBP20.85■□□□□ 0.93
TRAM1-205ENST00000521425 ADAMTS2O95450 1211 aa20.85■□□□□ 0.93
TRAM1-205ENST00000521425 SNRPA1P09661 255 aaKnown RBP20.85■□□□□ 0.93
TRAM1-205ENST00000521425 ZSCAN30Q86W11 494 aa20.85■□□□□ 0.93
TRAM1-205ENST00000521425 SYT1P21579 422 aa20.85■□□□□ 0.93
TRAM1-205ENST00000521425 GOLGA6L4A6NEF3 574 aa20.84■□□□□ 0.93
TRAM1-205ENST00000521425 HELBQ8NG08 1087 aaPredicted RBP20.84■□□□□ 0.93
TRAM1-205ENST00000521425 FMNL2Q96PY5 1086 aa20.84■□□□□ 0.93
TRAM1-205ENST00000521425 A0A0G2JLW4 131 aa20.84■□□□□ 0.93
TRAM1-205ENST00000521425 LARP1BQ659C4 914 aaKnown RBP20.84■□□□□ 0.93
TRAM1-205ENST00000521425 PUS3Q9BZE2 481 aaKnown RBP20.84■□□□□ 0.93
TRAM1-205ENST00000521425 NRKQ7Z2Y5 1582 aa20.84■□□□□ 0.93
TRAM1-205ENST00000521425 OFD1O75665 1012 aa20.83■□□□□ 0.93
TRAM1-205ENST00000521425 GTF2E1P29083 439 aaPredicted RBP20.83■□□□□ 0.93
TRAM1-205ENST00000521425 HSPA4P34932 840 aa20.83■□□□□ 0.93
TRAM1-205ENST00000521425 LSG1Q9H089 658 aaKnown RBP20.83■□□□□ 0.93
TRAM1-205ENST00000521425 LRRC24Q50LG9 513 aa20.83■□□□□ 0.93
TRAM1-205ENST00000521425 TSC1Q92574 1164 aa20.83■□□□□ 0.93
TRAM1-205ENST00000521425 LIMCH1Q9UPQ0 1083 aa20.83■□□□□ 0.93
TRAM1-205ENST00000521425 SETD1AO15047 1707 aaKnown RBP20.83■□□□□ 0.92
TRAM1-205ENST00000521425 NUTM2BA6NNL0 878 aaPredicted RBP20.83■□□□□ 0.92
TRAM1-205ENST00000521425 NUTM2EB1AL46 878 aaPredicted RBP20.83■□□□□ 0.92
TRAM1-205ENST00000521425 SNAP23O00161 211 aa20.83■□□□□ 0.92
TRAM1-205ENST00000521425 POLA2Q14181 598 aa20.83■□□□□ 0.92
TRAM1-205ENST00000521425 PI16Q6UXB8 463 aa20.83■□□□□ 0.92
TRAM1-205ENST00000521425 NUTM2AQ8IVF1 878 aaPredicted RBP20.83■□□□□ 0.92
TRAM1-205ENST00000521425 PDIA6Q15084 440 aa20.82■□□□□ 0.92
TRAM1-205ENST00000521425 CKAP2LQ8IYA6 745 aa20.82■□□□□ 0.92
TRAM1-205ENST00000521425 SPC24Q8NBT2 197 aa20.82■□□□□ 0.92
TRAM1-205ENST00000521425 KCNQ4P56696 695 aa20.82■□□□□ 0.92
TRAM1-205ENST00000521425 CREB3L3Q68CJ9 461 aa20.82■□□□□ 0.92
TRAM1-205ENST00000521425 DBNLQ9UJU6 430 aaKnown RBP20.82■□□□□ 0.92
TRAM1-205ENST00000521425 KIF24Q5T7B8 1368 aa20.82■□□□□ 0.92
TRAM1-205ENST00000521425 STX6O43752 255 aa20.81■□□□□ 0.92
TRAM1-205ENST00000521425 HCLS1P14317 486 aaPredicted RBP20.81■□□□□ 0.92
TRAM1-205ENST00000521425 ME3Q16798 604 aa20.81■□□□□ 0.92
TRAM1-205ENST00000521425 BLOC1S2Q6QNY1 142 aa20.81■□□□□ 0.92
TRAM1-205ENST00000521425 STAP2Q9UGK3 403 aa20.81■□□□□ 0.92
TRAM1-205ENST00000521425 PAXIP1Q6ZW49 1069 aaPredicted RBP20.81■□□□□ 0.92
TRAM1-205ENST00000521425 RAD50Q92878 1312 aa20.8■□□□□ 0.92
TRAM1-205ENST00000521425 SALL3Q9BXA9 1300 aa20.8■□□□□ 0.92
TRAM1-205ENST00000521425 SMAP1Q8IYB5 467 aaPredicted RBP20.8■□□□□ 0.92
TRAM1-205ENST00000521425 MAP7D2Q96T17 732 aa20.8■□□□□ 0.92
TRAM1-205ENST00000521425 USP25Q9UHP3 1055 aa20.8■□□□□ 0.92
TRAM1-205ENST00000521425 TBC1D2BQ9UPU7 963 aa20.8■□□□□ 0.92
TRAM1-205ENST00000521425 A0A087WWV3 80 aa20.8■□□□□ 0.92
TRAM1-205ENST00000521425 ACSBG1Q96GR2 724 aa20.8■□□□□ 0.92
TRAM1-205ENST00000521425 JAK2O60674 1132 aa20.8■□□□□ 0.92
TRAM1-205ENST00000521425 APPP05067 770 aa20.8■□□□□ 0.92
TRAM1-205ENST00000521425 VPS53Q5VIR6 699 aa20.8■□□□□ 0.92
TRAM1-205ENST00000521425 C17orf53Q8N3J3 647 aaPredicted RBP20.8■□□□□ 0.92
TRAM1-205ENST00000521425 SMIM5Q71RC9 77 aa20.79■□□□□ 0.92
TRAM1-205ENST00000521425 NPHP4O75161 1426 aaPredicted RBP20.79■□□□□ 0.92
TRAM1-205ENST00000521425 ZCRB1Q8TBF4 217 aaKnown RBP20.79■□□□□ 0.92
TRAM1-205ENST00000521425 ASAP1Q9ULH1 1129 aa20.79■□□□□ 0.92
TRAM1-205ENST00000521425 TPCN1Q9ULQ1 816 aa20.79■□□□□ 0.92
TRAM1-205ENST00000521425 IQSEC3Q9UPP2 1182 aaPredicted RBP20.79■□□□□ 0.92
TRAM1-205ENST00000521425 MON2Q7Z3U7 1717 aa20.79■□□□□ 0.92
TRAM1-205ENST00000521425 EVI5LQ96CN4 794 aa20.79■□□□□ 0.92
TRAM1-205ENST00000521425 NCOA5Q9HCD5 579 aaKnown RBP20.78■□□□□ 0.92
TRAM1-205ENST00000521425 TTLL5Q6EMB2 1281 aa20.78■□□□□ 0.92
TRAM1-205ENST00000521425 ERCC4Q92889 916 aaPredicted RBP20.78■□□□□ 0.92
TRAM1-205ENST00000521425 BRF1Q92994 677 aa20.77■□□□□ 0.92
TRAM1-205ENST00000521425 METTL22Q9BUU2 404 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms