RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 SLC10A5Q5PT55 438 aa32.98■■■□□ 2.87
VEGFA-220ENST00000519767 DNAJC5GQ8N7S2 189 aa32.98■■■□□ 2.87
VEGFA-220ENST00000519767 XAGE3Q8WTP9 111 aa32.98■■■□□ 2.87
VEGFA-220ENST00000519767 RBM17Q96I25 401 aaKnown RBP32.98■■■□□ 2.87
VEGFA-220ENST00000519767 NLRP3Q96P20 1036 aa32.98■■■□□ 2.87
VEGFA-220ENST00000519767 CRAMP1Q96RY5 1269 aa32.98■■■□□ 2.87
VEGFA-220ENST00000519767 ARFGEF2Q9Y6D5 1785 aa32.98■■■□□ 2.87
VEGFA-220ENST00000519767 CALD1Q05682 793 aaKnown RBP32.97■■■□□ 2.87
VEGFA-220ENST00000519767 AIMP1Q12904 312 aaKnown RBP32.97■■■□□ 2.87
VEGFA-220ENST00000519767 RNF123Q5XPI4 1314 aa32.97■■■□□ 2.87
VEGFA-220ENST00000519767 KRT24Q2M2I5 525 aa32.96■■■□□ 2.87
VEGFA-220ENST00000519767 APAF1O14727 1248 aa32.95■■■□□ 2.87
VEGFA-220ENST00000519767 HDGFL1Q5TGJ6 251 aa32.95■■■□□ 2.87
VEGFA-220ENST00000519767 OLFM4Q6UX06 510 aa32.95■■■□□ 2.87
VEGFA-220ENST00000519767 PSMD1Q99460 953 aa32.95■■■□□ 2.87
VEGFA-220ENST00000519767 ZNF277Q9NRM2 450 aaPredicted RBP32.95■■■□□ 2.87
VEGFA-220ENST00000519767 DBF4Q9UBU7 674 aaPredicted RBP32.95■■■□□ 2.87
VEGFA-220ENST00000519767 DICER1Q9UPY3 1922 aaKnown RBP32.94■■■□□ 2.86
VEGFA-220ENST00000519767 DDNO94850 711 aaPredicted RBP32.94■■■□□ 2.86
VEGFA-220ENST00000519767 TCIRG1Q13488 830 aa32.94■■■□□ 2.86
VEGFA-220ENST00000519767 SYNE4Q8N205 404 aa32.94■■■□□ 2.86
VEGFA-220ENST00000519767 TIAM2Q8IVF5 1701 aa32.94■■■□□ 2.86
VEGFA-220ENST00000519767 ZNF853P0CG23 659 aa32.92■■■□□ 2.86
VEGFA-220ENST00000519767 CHPF2Q9P2E5 772 aa32.92■■■□□ 2.86
VEGFA-220ENST00000519767 IARSP41252 1262 aaKnown RBP32.91■■■□□ 2.86
VEGFA-220ENST00000519767 GNAI1P63096 354 aa32.91■■■□□ 2.86
VEGFA-220ENST00000519767 DUSP27Q5VZP5 1158 aa32.91■■■□□ 2.86
VEGFA-220ENST00000519767 NLRP10Q86W26 655 aa32.91■■■□□ 2.86
VEGFA-220ENST00000519767 MBIPQ9NS73 344 aa32.91■■■□□ 2.86
VEGFA-220ENST00000519767 IFT57Q9NWB7 429 aa32.91■■■□□ 2.86
VEGFA-220ENST00000519767 WDR90Q96KV7 1748 aa32.91■■■□□ 2.86
VEGFA-220ENST00000519767 IQCA1LA6NCM1 817 aa32.9■■■□□ 2.86
VEGFA-220ENST00000519767 TMX4Q9H1E5 349 aaPredicted RBP32.9■■■□□ 2.86
VEGFA-220ENST00000519767 HYPKQ9NX55 129 aa32.9■■■□□ 2.86
VEGFA-220ENST00000519767 CACNA1SQ13698 1873 aa32.89■■■□□ 2.86
VEGFA-220ENST00000519767 ANKRD13DQ6ZTN6 518 aa32.89■■■□□ 2.86
VEGFA-220ENST00000519767 PLBD2Q8NHP8 589 aa32.89■■■□□ 2.86
VEGFA-220ENST00000519767 L3MBTL3Q96JM7 780 aaPredicted RBP32.89■■■□□ 2.86
VEGFA-220ENST00000519767 JDP2Q8WYK2 163 aa32.88■■■□□ 2.85
VEGFA-220ENST00000519767 TRMT112Q9UI30 125 aaKnown RBP32.88■■■□□ 2.85
VEGFA-220ENST00000519767 C3orf67Q6ZVT6 689 aa32.87■■■□□ 2.85
VEGFA-220ENST00000519767 PPEF1O14829 653 aaPredicted RBP32.86■■■□□ 2.85
VEGFA-220ENST00000519767 CHMP4AQ9BY43 222 aa32.86■■■□□ 2.85
VEGFA-220ENST00000519767 FZD9O00144 591 aa32.85■■■□□ 2.85
VEGFA-220ENST00000519767 SH3TC1Q8TE82 1336 aa32.84■■■□□ 2.85
VEGFA-220ENST00000519767 BBOX1O75936 387 aa32.84■■■□□ 2.85
VEGFA-220ENST00000519767 CHADLQ6NUI6 762 aa32.83■■■□□ 2.85
VEGFA-220ENST00000519767 KLRG1Q96E93 195 aa32.83■■■□□ 2.85
VEGFA-220ENST00000519767 SNED1Q8TER0 1413 aa32.83■■■□□ 2.85
VEGFA-220ENST00000519767 HTRA3P83110 453 aa32.82■■■□□ 2.84
VEGFA-220ENST00000519767 ATP6V0A2Q9Y487 856 aa32.82■■■□□ 2.84
VEGFA-220ENST00000519767 HCLS1P14317 486 aaPredicted RBP32.81■■■□□ 2.84
VEGFA-220ENST00000519767 VPS33BQ9H267 617 aa32.81■■■□□ 2.84
VEGFA-220ENST00000519767 TCERG1O14776 1098 aaKnown RBP32.8■■■□□ 2.84
VEGFA-220ENST00000519767 GPC2Q8N158 579 aa32.8■■■□□ 2.84
VEGFA-220ENST00000519767 ISCA1Q9BUE6 129 aa32.8■■■□□ 2.84
VEGFA-220ENST00000519767 TAF1DQ9H5J8 278 aaPredicted RBP32.8■■■□□ 2.84
VEGFA-220ENST00000519767 ZNF541Q9H0D2 1346 aa32.79■■■□□ 2.84
VEGFA-220ENST00000519767 DDX46Q7L014 1031 aaKnown RBP32.79■■■□□ 2.84
VEGFA-220ENST00000519767 EIF6P56537 245 aaKnown RBP32.78■■■□□ 2.84
VEGFA-220ENST00000519767 TRIM28Q13263 835 aaKnown RBP32.78■■■□□ 2.84
VEGFA-220ENST00000519767 LARGE2Q8N3Y3 721 aa32.78■■■□□ 2.84
VEGFA-220ENST00000519767 HACL1Q9UJ83 578 aa32.78■■■□□ 2.84
VEGFA-220ENST00000519767 ABCC4O15439 1325 aa32.77■■■□□ 2.84
VEGFA-220ENST00000519767 LDHDQ86WU2 507 aa32.77■■■□□ 2.84
VEGFA-220ENST00000519767 SP8Q8IXZ3 490 aa32.77■■■□□ 2.84
VEGFA-220ENST00000519767 SUPT20HQ8NEM7 779 aa32.76■■■□□ 2.83
VEGFA-220ENST00000519767 ELL2O00472 640 aaPredicted RBP32.75■■■□□ 2.83
VEGFA-220ENST00000519767 JMYQ8N9B5 988 aa32.75■■■□□ 2.83
VEGFA-220ENST00000519767 GOLGA2Q08379 1002 aa32.74■■■□□ 2.83
VEGFA-220ENST00000519767 CCDC27Q2M243 656 aa32.74■■■□□ 2.83
VEGFA-220ENST00000519767 CCDC184Q52MB2 194 aa32.74■■■□□ 2.83
VEGFA-220ENST00000519767 TMC4Q7Z404 712 aa32.74■■■□□ 2.83
VEGFA-220ENST00000519767 RIC3Q7Z5B4 369 aa32.74■■■□□ 2.83
VEGFA-220ENST00000519767 PNMA8AQ86V59 439 aaPredicted RBP32.74■■■□□ 2.83
VEGFA-220ENST00000519767 ZNF316A6NFI3 1004 aaPredicted RBP32.73■■■□□ 2.83
VEGFA-220ENST00000519767 ATP5J2-PTCD1G3V325 749 aa32.73■■■□□ 2.83
VEGFA-220ENST00000519767 GRAPQ13588 217 aa32.73■■■□□ 2.83
VEGFA-220ENST00000519767 C8orf58Q8NAV2 365 aa32.73■■■□□ 2.83
VEGFA-220ENST00000519767 GRAPLQ8TC17 118 aaPredicted RBP32.73■■■□□ 2.83
VEGFA-220ENST00000519767 RTFDC1Q9BY42 306 aaPredicted RBP32.73■■■□□ 2.83
VEGFA-220ENST00000519767 POTEIP0CG38 1075 aa32.72■■■□□ 2.83
VEGFA-220ENST00000519767 POTEJP0CG39 1038 aa32.72■■■□□ 2.83
VEGFA-220ENST00000519767 EPHX2P34913 555 aa32.72■■■□□ 2.83
VEGFA-220ENST00000519767 CCDC30Q5VVM6 783 aa32.72■■■□□ 2.83
VEGFA-220ENST00000519767 FAM89AQ96GI7 184 aa32.72■■■□□ 2.83
VEGFA-220ENST00000519767 NCBP3Q53F19 620 aaKnown RBP32.71■■■□□ 2.83
VEGFA-220ENST00000519767 NIM1KQ8IY84 436 aa32.71■■■□□ 2.83
VEGFA-220ENST00000519767 MPNDQ8N594 471 aa32.71■■■□□ 2.83
VEGFA-220ENST00000519767 SCN4AP35499 1836 aa32.7■■■□□ 2.83
VEGFA-220ENST00000519767 PPIP5K2O43314 1243 aa32.7■■■□□ 2.83
VEGFA-220ENST00000519767 ANP32CO43423 234 aa32.7■■■□□ 2.83
VEGFA-220ENST00000519767 HSP90B1P14625 803 aaKnown RBP32.7■■■□□ 2.83
VEGFA-220ENST00000519767 SF3B3Q15393 1217 aaKnown RBP32.7■■■□□ 2.83
VEGFA-220ENST00000519767 DPP8Q6V1X1 898 aaPredicted RBP32.7■■■□□ 2.83
VEGFA-220ENST00000519767 GJA3Q9Y6H8 435 aa32.7■■■□□ 2.83
VEGFA-220ENST00000519767 ANKRD36CQ5JPF3 1778 aa32.7■■■□□ 2.82
VEGFA-220ENST00000519767 EAPPQ56P03 285 aaPredicted RBP32.69■■■□□ 2.82
VEGFA-220ENST00000519767 PHAXQ9H814 394 aaKnown RBP32.69■■■□□ 2.82
VEGFA-220ENST00000519767 CLEC11AQ9Y240 323 aa32.68■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms