RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 ALDH1L2Q3SY69 923 aa14.79□□□□□ -0.04
SPIDR-212ENST00000519661 DALRD3Q5D0E6 543 aaKnown RBP14.79□□□□□ -0.04
SPIDR-212ENST00000519661 SNED1Q8TER0 1413 aa14.79□□□□□ -0.04
SPIDR-212ENST00000519661 CDCA7LQ96GN5 454 aa14.79□□□□□ -0.04
SPIDR-212ENST00000519661 UTP14AQ9BVJ6 771 aaKnown RBP14.79□□□□□ -0.04
SPIDR-212ENST00000519661 TNRC6CQ9HCJ0 1690 aaKnown RBP14.79□□□□□ -0.04
SPIDR-212ENST00000519661 SH3TC1Q8TE82 1336 aa14.78□□□□□ -0.04
SPIDR-212ENST00000519661 NPR1P16066 1061 aa14.78□□□□□ -0.04
SPIDR-212ENST00000519661 GPTP24298 496 aa14.78□□□□□ -0.04
SPIDR-212ENST00000519661 GPR162Q16538 588 aa14.78□□□□□ -0.04
SPIDR-212ENST00000519661 G2E3Q7L622 706 aa14.78□□□□□ -0.04
SPIDR-212ENST00000519661 C2CD5Q86YS7 1000 aa14.78□□□□□ -0.04
SPIDR-212ENST00000519661 TTLL6Q8N841 843 aa14.78□□□□□ -0.04
SPIDR-212ENST00000519661 C7orf43Q8WVR3 580 aa14.78□□□□□ -0.04
SPIDR-212ENST00000519661 MASTLQ96GX5 879 aa14.78□□□□□ -0.04
SPIDR-212ENST00000519661 PI4KAP2A4QPH2 592 aa14.77□□□□□ -0.05
SPIDR-212ENST00000519661 ERFEQ4G0M1 354 aa14.77□□□□□ -0.05
SPIDR-212ENST00000519661 RIC3Q7Z5B4 369 aa14.77□□□□□ -0.05
SPIDR-212ENST00000519661 PI4KAP1Q8N8J0 262 aa14.77□□□□□ -0.05
SPIDR-212ENST00000519661 CNKSR1Q969H4 720 aa14.77□□□□□ -0.05
SPIDR-212ENST00000519661 LTBP3Q9NS15 1303 aa14.76□□□□□ -0.05
SPIDR-212ENST00000519661 IGKV5-2P06315 115 aa14.76□□□□□ -0.05
SPIDR-212ENST00000519661 ZBTB38Q8NAP3 1195 aaPredicted RBP14.76□□□□□ -0.05
SPIDR-212ENST00000519661 CRAMP1Q96RY5 1269 aa14.76□□□□□ -0.05
SPIDR-212ENST00000519661 MAP3K2Q9Y2U5 619 aa14.76□□□□□ -0.05
SPIDR-212ENST00000519661 LAMB2P55268 1798 aa14.75□□□□□ -0.05
SPIDR-212ENST00000519661 PTPRCP08575 1304 aa14.75□□□□□ -0.05
SPIDR-212ENST00000519661 CDHR2Q9BYE9 1310 aa14.75□□□□□ -0.05
SPIDR-212ENST00000519661 PCCAP05165 728 aaPredicted RBP14.75□□□□□ -0.05
SPIDR-212ENST00000519661 SF3B3Q15393 1217 aaKnown RBP14.75□□□□□ -0.05
SPIDR-212ENST00000519661 NUTM1Q86Y26 1132 aa14.75□□□□□ -0.05
SPIDR-212ENST00000519661 LINS1Q8NG48 757 aa14.75□□□□□ -0.05
SPIDR-212ENST00000519661 HSP90B1P14625 803 aaKnown RBP14.74□□□□□ -0.05
SPIDR-212ENST00000519661 SOGA3Q5TF21 947 aa14.74□□□□□ -0.05
SPIDR-212ENST00000519661 MRPL50Q8N5N7 158 aaKnown RBP14.74□□□□□ -0.05
SPIDR-212ENST00000519661 DNAAF4Q8WXU2 420 aa14.74□□□□□ -0.05
SPIDR-212ENST00000519661 TRMT112Q9UI30 125 aaKnown RBP14.74□□□□□ -0.05
SPIDR-212ENST00000519661 BCS1LQ9Y276 419 aa14.74□□□□□ -0.05
SPIDR-212ENST00000519661 CHD4Q14839 1912 aa14.74□□□□□ -0.05
SPIDR-212ENST00000519661 DDX60Q8IY21 1712 aaKnown RBP14.73□□□□□ -0.05
SPIDR-212ENST00000519661 NEURL1BA8MQ27 555 aa14.73□□□□□ -0.05
SPIDR-212ENST00000519661 ALDH1B1P30837 517 aa14.73□□□□□ -0.05
SPIDR-212ENST00000519661 HNRNPUQ00839 825 aaKnown RBP eCLIP14.73□□□□□ -0.05
SPIDR-212ENST00000519661 GRIPAP1Q4V328 841 aa14.73□□□□□ -0.05
SPIDR-212ENST00000519661 PRPF40BQ6NWY9 871 aaKnown RBP14.73□□□□□ -0.05
SPIDR-212ENST00000519661 SSH1Q8WYL5 1049 aa14.73□□□□□ -0.05
SPIDR-212ENST00000519661 NLRP3Q96P20 1036 aa14.73□□□□□ -0.05
SPIDR-212ENST00000519661 CWC25Q9NXE8 425 aaPredicted RBP14.73□□□□□ -0.05
SPIDR-212ENST00000519661 RTL9Q8NET4 1388 aa14.73□□□□□ -0.05
SPIDR-212ENST00000519661 ZC3H4Q9UPT8 1303 aaKnown RBP14.72□□□□□ -0.05
SPIDR-212ENST00000519661 ATP5J2-PTCD1G3V325 749 aa14.72□□□□□ -0.05
SPIDR-212ENST00000519661 H7C1W4 665 aa14.72□□□□□ -0.05
SPIDR-212ENST00000519661 GTF2E1P29083 439 aaPredicted RBP14.72□□□□□ -0.05
SPIDR-212ENST00000519661 CASP7P55210 303 aa14.72□□□□□ -0.05
SPIDR-212ENST00000519661 NEXNQ0ZGT2 675 aa14.72□□□□□ -0.05
SPIDR-212ENST00000519661 FKBP5Q13451 457 aaPredicted RBP14.72□□□□□ -0.05
SPIDR-212ENST00000519661 BEND3Q5T5X7 828 aa14.72□□□□□ -0.05
SPIDR-212ENST00000519661 CC2D2BQ6DHV5 1058 aa14.72□□□□□ -0.05
SPIDR-212ENST00000519661 C3orf67Q6ZVT6 689 aa14.72□□□□□ -0.05
SPIDR-212ENST00000519661 CCDC24Q8N4L8 307 aa14.72□□□□□ -0.05
SPIDR-212ENST00000519661 MYD88Q99836 296 aa14.72□□□□□ -0.05
SPIDR-212ENST00000519661 PLA2G12BQ9BX93 195 aa14.72□□□□□ -0.05
SPIDR-212ENST00000519661 NPHP1O15259 732 aa14.71□□□□□ -0.05
SPIDR-212ENST00000519661 GCKRQ14397 625 aa14.71□□□□□ -0.05
SPIDR-212ENST00000519661 SLX4Q8IY92 1834 aa14.71□□□□□ -0.06
SPIDR-212ENST00000519661 UTYO14607 1347 aa14.7□□□□□ -0.06
SPIDR-212ENST00000519661 FER1L6Q2WGJ9 1857 aa14.7□□□□□ -0.06
SPIDR-212ENST00000519661 NFKBIEO00221 500 aa14.7□□□□□ -0.06
SPIDR-212ENST00000519661 TCERG1O14776 1098 aaKnown RBP14.7□□□□□ -0.06
SPIDR-212ENST00000519661 ALDH1L1O75891 902 aa14.7□□□□□ -0.06
SPIDR-212ENST00000519661 RARSP54136 660 aaKnown RBP14.7□□□□□ -0.06
SPIDR-212ENST00000519661 TMC4Q7Z404 712 aa14.7□□□□□ -0.06
SPIDR-212ENST00000519661 SYNE4Q8N205 404 aa14.7□□□□□ -0.06
SPIDR-212ENST00000519661 ARHGAP45Q92619 1136 aa14.7□□□□□ -0.06
SPIDR-212ENST00000519661 FAM89AQ96GI7 184 aa14.7□□□□□ -0.06
SPIDR-212ENST00000519661 FAM177BA6PVY3 158 aa14.69□□□□□ -0.06
SPIDR-212ENST00000519661 IRS4O14654 1257 aaPredicted RBP14.69□□□□□ -0.06
SPIDR-212ENST00000519661 BBOX1O75936 387 aa14.69□□□□□ -0.06
SPIDR-212ENST00000519661 RBM17Q96I25 401 aaKnown RBP14.69□□□□□ -0.06
SPIDR-212ENST00000519661 LRRC37AA6NMS7 1700 aa14.69□□□□□ -0.06
SPIDR-212ENST00000519661 HCLS1P14317 486 aaPredicted RBP14.68□□□□□ -0.06
SPIDR-212ENST00000519661 CWF19L2Q2TBE0 894 aaKnown RBP14.68□□□□□ -0.06
SPIDR-212ENST00000519661 ZNF622Q969S3 477 aaKnown RBP eCLIP14.68□□□□□ -0.062e-7■□□□□ 8.8
SPIDR-212ENST00000519661 PSMD1Q99460 953 aa14.68□□□□□ -0.06
SPIDR-212ENST00000519661 ABCC4O15439 1325 aa14.67□□□□□ -0.06
SPIDR-212ENST00000519661 PDE8AO60658 829 aa14.67□□□□□ -0.06
SPIDR-212ENST00000519661 CCDC93Q567U6 631 aa14.67□□□□□ -0.06
SPIDR-212ENST00000519661 RTKN2Q8IZC4 609 aa14.67□□□□□ -0.06
SPIDR-212ENST00000519661 PELP1Q8IZL8 1130 aaKnown RBP14.67□□□□□ -0.06
SPIDR-212ENST00000519661 RPGRQ92834 1020 aaKnown RBP14.67□□□□□ -0.06
SPIDR-212ENST00000519661 ATP6V0A2Q9Y487 856 aa14.67□□□□□ -0.06
SPIDR-212ENST00000519661 KIF16BQ96L93 1317 aa14.66□□□□□ -0.06
SPIDR-212ENST00000519661 CSF1RP07333 972 aa14.66□□□□□ -0.06
SPIDR-212ENST00000519661 LMNB1P20700 586 aa14.66□□□□□ -0.06
SPIDR-212ENST00000519661 PRELPP51888 382 aa14.66□□□□□ -0.06
SPIDR-212ENST00000519661 GRAPQ13588 217 aa14.66□□□□□ -0.06
SPIDR-212ENST00000519661 GRAPLQ8TC17 118 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-212ENST00000519661 RTFDC1Q9BY42 306 aaPredicted RBP14.66□□□□□ -0.06
SPIDR-212ENST00000519661 F6X3S4 739 aa14.65□□□□□ -0.06
SPIDR-212ENST00000519661 C21orf2O43822 256 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms