RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 USP17L3A6NCW0 530 aa4.36□□□□□ -1.71
CCNC-208ENST00000519617 USP17L4A6NCW7 530 aa4.36□□□□□ -1.71
CCNC-208ENST00000519617 PALM3A6NDB9 673 aaPredicted RBP4.36□□□□□ -1.71
CCNC-208ENST00000519617 C21orf2O43822 256 aa4.36□□□□□ -1.71
CCNC-208ENST00000519617 DKK1O94907 266 aa4.36□□□□□ -1.71
CCNC-208ENST00000519617 RAC1P63000 192 aa4.36□□□□□ -1.71
CCNC-208ENST00000519617 HIF1AQ16665 826 aa4.36□□□□□ -1.71
CCNC-208ENST00000519617 USP17L2Q6R6M4 530 aa4.36□□□□□ -1.71
CCNC-208ENST00000519617 USP17L1Q7RTZ2 530 aa4.36□□□□□ -1.71
CCNC-208ENST00000519617 BTLAQ7Z6A9 289 aa4.36□□□□□ -1.71
CCNC-208ENST00000519617 OGFOD1Q8N543 542 aa4.36□□□□□ -1.71
CCNC-208ENST00000519617 SLC6A14Q9UN76 642 aa4.36□□□□□ -1.71
CCNC-208ENST00000519617 PPP1R12BO60237 982 aaPredicted RBP4.35□□□□□ -1.71
CCNC-208ENST00000519617 AFF1P51825 1210 aaKnown RBP4.35□□□□□ -1.71
CCNC-208ENST00000519617 LRP8Q14114 963 aa4.35□□□□□ -1.71
CCNC-208ENST00000519617 TPRNQ4KMQ1 711 aa4.35□□□□□ -1.71
CCNC-208ENST00000519617 NBPF11Q86T75 865 aa4.35□□□□□ -1.71
CCNC-208ENST00000519617 ALDH16A1Q8IZ83 802 aa4.35□□□□□ -1.71
CCNC-208ENST00000519617 SIX5Q8N196 739 aa4.35□□□□□ -1.71
CCNC-208ENST00000519617 GAS2L2Q8NHY3 880 aa4.35□□□□□ -1.71
CCNC-208ENST00000519617 ADAMTS19Q8TE59 1207 aa4.35□□□□□ -1.71
CCNC-208ENST00000519617 C2orf49Q9BVC5 232 aaPredicted RBP4.35□□□□□ -1.71
CCNC-208ENST00000519617 SSBP4Q9BWG4 385 aaPredicted RBP4.35□□□□□ -1.71
CCNC-208ENST00000519617 GSX2Q9BZM3 304 aa4.35□□□□□ -1.71
CCNC-208ENST00000519617 UBE2OQ9C0C9 1292 aaKnown RBP4.35□□□□□ -1.71
CCNC-208ENST00000519617 JPH1Q9HDC5 661 aaPredicted RBP4.35□□□□□ -1.71
CCNC-208ENST00000519617 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.71
CCNC-208ENST00000519617 ATP9BO43861 1147 aa4.34□□□□□ -1.71
CCNC-208ENST00000519617 IER5Q5VY09 327 aa4.34□□□□□ -1.71
CCNC-208ENST00000519617 PSAPL1Q6NUJ1 521 aa4.34□□□□□ -1.71
CCNC-208ENST00000519617 SHISA2Q6UWI4 295 aa4.34□□□□□ -1.71
CCNC-208ENST00000519617 FMR1NBQ8N0W7 255 aaPredicted RBP4.34□□□□□ -1.71
CCNC-208ENST00000519617 TSEN2Q8NCE0 465 aaKnown RBP4.34□□□□□ -1.71
CCNC-208ENST00000519617 NUDT8Q8WV74 236 aa4.34□□□□□ -1.71
CCNC-208ENST00000519617 POM121Q96HA1 1249 aa4.34□□□□□ -1.71
CCNC-208ENST00000519617 UCN2Q96RP3 112 aa4.34□□□□□ -1.71
CCNC-208ENST00000519617 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
CCNC-208ENST00000519617 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
CCNC-208ENST00000519617 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
CCNC-208ENST00000519617 DNAJB12Q9NXW2 375 aaKnown RBP4.34□□□□□ -1.71
CCNC-208ENST00000519617 MKRN1Q9UHC7 482 aaKnown RBP4.34□□□□□ -1.71
CCNC-208ENST00000519617 ATAD2Q6PL18 1390 aa4.34□□□□□ -1.71
CCNC-208ENST00000519617 POM121CA8CG34 1229 aa4.33□□□□□ -1.72
CCNC-208ENST00000519617 HYAL3O43820 417 aaPredicted RBP4.33□□□□□ -1.72
CCNC-208ENST00000519617 RAD21O60216 631 aa4.33□□□□□ -1.72
CCNC-208ENST00000519617 RGS9O75916 674 aaPredicted RBP4.33□□□□□ -1.72
CCNC-208ENST00000519617 TBC1D8BQ0IIM8 1120 aa4.33□□□□□ -1.72
CCNC-208ENST00000519617 CCINQ13939 588 aa4.33□□□□□ -1.72
CCNC-208ENST00000519617 HDGFL1Q5TGJ6 251 aa4.33□□□□□ -1.72
CCNC-208ENST00000519617 DMRTC2Q8IXT2 367 aaPredicted RBP4.33□□□□□ -1.72
CCNC-208ENST00000519617 DTWD1Q8N5C7 304 aa4.33□□□□□ -1.72
CCNC-208ENST00000519617 TP53INP1Q96A56 240 aa4.33□□□□□ -1.72
CCNC-208ENST00000519617 IGFLR1Q9H665 355 aa4.33□□□□□ -1.72
CCNC-208ENST00000519617 DMGDHQ9UI17 866 aaKnown RBP4.33□□□□□ -1.72
CCNC-208ENST00000519617 MAP3K6O95382 1288 aa4.32□□□□□ -1.72
CCNC-208ENST00000519617 PCSK7Q16549 785 aa4.32□□□□□ -1.72
CCNC-208ENST00000519617 NAGPAQ9UK23 515 aa4.32□□□□□ -1.72
CCNC-208ENST00000519617 RBM19Q9Y4C8 960 aaKnown RBP4.32□□□□□ -1.72
CCNC-208ENST00000519617 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.32□□□□□ -1.72
CCNC-208ENST00000519617 TGFBR3LH3BV60 316 aa4.31□□□□□ -1.72
CCNC-208ENST00000519617 NFKB1P19838 968 aa4.31□□□□□ -1.72
CCNC-208ENST00000519617 SEC13P55735 322 aa4.31□□□□□ -1.72
CCNC-208ENST00000519617 GRIK5Q16478 980 aa4.31□□□□□ -1.72
CCNC-208ENST00000519617 RTN1Q16799 776 aa4.31□□□□□ -1.72
CCNC-208ENST00000519617 MSL1Q68DK7 614 aa4.31□□□□□ -1.72
CCNC-208ENST00000519617 FBXO11Q86XK2 927 aa4.31□□□□□ -1.72
CCNC-208ENST00000519617 SCG3Q8WXD2 468 aaKnown RBP4.31□□□□□ -1.72
CCNC-208ENST00000519617 TTC9Q92623 222 aa4.31□□□□□ -1.72
CCNC-208ENST00000519617 ZNF594Q96JF6 807 aaPredicted RBP4.31□□□□□ -1.72
CCNC-208ENST00000519617 PNMA5Q96PV4 448 aa4.31□□□□□ -1.72
CCNC-208ENST00000519617 C11orf16Q9NQ32 467 aa4.31□□□□□ -1.72
CCNC-208ENST00000519617 FRRS1LQ9P0K9 344 aa4.31□□□□□ -1.72
CCNC-208ENST00000519617 USP21Q9UK80 565 aa4.31□□□□□ -1.72
CCNC-208ENST00000519617 BCS1LQ9Y276 419 aa4.31□□□□□ -1.72
CCNC-208ENST00000519617 GRNP28799 593 aaKnown RBP4.3□□□□□ -1.72
CCNC-208ENST00000519617 INPP5BP32019 993 aa4.3□□□□□ -1.72
CCNC-208ENST00000519617 FAM35AQ86V20 835 aa4.3□□□□□ -1.72
CCNC-208ENST00000519617 TRPM4Q8TD43 1214 aa4.3□□□□□ -1.72
CCNC-208ENST00000519617 CHMP7Q8WUX9 453 aaPredicted RBP4.3□□□□□ -1.72
CCNC-208ENST00000519617 WFDC12Q8WWY7 111 aa4.3□□□□□ -1.72
CCNC-208ENST00000519617 NGLY1Q96IV0 654 aa4.3□□□□□ -1.72
CCNC-208ENST00000519617 LPIN3Q9BQK8 851 aa4.3□□□□□ -1.72
CCNC-208ENST00000519617 ZBTB42B2RXF5 422 aa4.29□□□□□ -1.72
CCNC-208ENST00000519617 EPB42P16452 691 aa4.29□□□□□ -1.72
CCNC-208ENST00000519617 RASA1P20936 1047 aa4.29□□□□□ -1.72
CCNC-208ENST00000519617 FLIIQ13045 1269 aa4.29□□□□□ -1.72
CCNC-208ENST00000519617 PERM1Q5SV97 790 aa4.29□□□□□ -1.72
CCNC-208ENST00000519617 IGF2-ASQ6U949 168 aa4.29□□□□□ -1.72
CCNC-208ENST00000519617 RNF112Q9ULX5 631 aa4.29□□□□□ -1.72
CCNC-208ENST00000519617 CPB1P15086 417 aa4.28□□□□□ -1.72
CCNC-208ENST00000519617 UBTFP17480 764 aaKnown RBP4.28□□□□□ -1.72
CCNC-208ENST00000519617 IGFBP4P22692 258 aa4.28□□□□□ -1.72
CCNC-208ENST00000519617 NOS3P29474 1203 aa4.28□□□□□ -1.72
CCNC-208ENST00000519617 IREB2P48200 963 aaKnown RBP4.28□□□□□ -1.72
CCNC-208ENST00000519617 DHX32Q7L7V1 743 aaKnown RBP4.28□□□□□ -1.72
CCNC-208ENST00000519617 SLC51AQ86UW1 340 aa4.28□□□□□ -1.72
CCNC-208ENST00000519617 WFDC8Q8IUA0 241 aa4.28□□□□□ -1.72
CCNC-208ENST00000519617 ZFATQ9P243 1243 aa4.28□□□□□ -1.72
CCNC-208ENST00000519617 DEAF1O75398 565 aaPredicted RBP4.27□□□□□ -1.73
CCNC-208ENST00000519617 TARSP26639 723 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms