RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 PLSCR2Q9NRY7 297 aa8.81□□□□□ -1
CTNNA1-214ENST00000519116 TBC1D2BQ9UPU7 963 aa8.81□□□□□ -1
CTNNA1-214ENST00000519116 RNF123Q5XPI4 1314 aa8.8□□□□□ -1
CTNNA1-214ENST00000519116 IARSP41252 1262 aaKnown RBP8.8□□□□□ -1
CTNNA1-214ENST00000519116 CYP4F22Q6NT55 531 aa8.8□□□□□ -1
CTNNA1-214ENST00000519116 MORC1Q86VD1 984 aa8.8□□□□□ -1
CTNNA1-214ENST00000519116 MCOLN1Q9GZU1 580 aa8.8□□□□□ -1
CTNNA1-214ENST00000519116 SCUBE2Q9NQ36 999 aa8.8□□□□□ -1
CTNNA1-214ENST00000519116 ZNF330Q9Y3S2 320 aaPredicted RBP8.8□□□□□ -1
CTNNA1-214ENST00000519116 MRC1P22897 1456 aa8.8□□□□□ -1
CTNNA1-214ENST00000519116 CAMTA2O94983 1202 aa8.79□□□□□ -1
CTNNA1-214ENST00000519116 LMOD1P29536 600 aaPredicted RBP8.79□□□□□ -1
CTNNA1-214ENST00000519116 GRM1Q13255 1194 aa8.79□□□□□ -1
CTNNA1-214ENST00000519116 NBPF5PQ86XG9 351 aaPredicted RBP8.79□□□□□ -1
CTNNA1-214ENST00000519116 JDP2Q8WYK2 163 aa8.79□□□□□ -1
CTNNA1-214ENST00000519116 POLR3GLQ9BT43 218 aa8.79□□□□□ -1
CTNNA1-214ENST00000519116 TLL2Q9Y6L7 1015 aa8.79□□□□□ -1
CTNNA1-214ENST00000519116 KLRG2A4D1S0 409 aaPredicted RBP8.78□□□□□ -1
CTNNA1-214ENST00000519116 EIF6P56537 245 aaKnown RBP8.78□□□□□ -1
CTNNA1-214ENST00000519116 SYNE4Q8N205 404 aa8.78□□□□□ -1
CTNNA1-214ENST00000519116 ZNF496Q96IT1 587 aaPredicted RBP8.78□□□□□ -1
CTNNA1-214ENST00000519116 TSKSQ9UJT2 592 aa8.78□□□□□ -1
CTNNA1-214ENST00000519116 DLEC1Q9Y238 1755 aa8.78□□□□□ -1
CTNNA1-214ENST00000519116 HEG1Q9ULI3 1381 aa8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 AOC2O75106 756 aa8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 ALDH1B1P30837 517 aa8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 BRPF1P55201 1214 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 DGKZQ13574 1117 aa8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 MTHFSDQ2M296 383 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 CST9Q5W186 159 aa8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 ZNF790Q6PG37 636 aa8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 CLEC4GQ6UXB4 293 aa8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 USP50Q70EL3 339 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 DZIP3Q86Y13 1208 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 PSMD1Q99460 953 aa8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 TMEM106CQ9BVX2 250 aa8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 PANK3Q9H999 370 aa8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 ZNF652Q9Y2D9 606 aa8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 GJA3Q9Y6H8 435 aa8.77□□□□□ -1.01
CTNNA1-214ENST00000519116 SEC24BO95487 1268 aa8.76□□□□□ -1.01
CTNNA1-214ENST00000519116 A1BGP04217 495 aa8.76□□□□□ -1.01
CTNNA1-214ENST00000519116 TEFQ10587 303 aa8.76□□□□□ -1.01
CTNNA1-214ENST00000519116 CC2D2BQ6DHV5 1058 aa8.76□□□□□ -1.01
CTNNA1-214ENST00000519116 OLFM4Q6UX06 510 aa8.76□□□□□ -1.01
CTNNA1-214ENST00000519116 TPTE2Q6XPS3 522 aa8.76□□□□□ -1.01
CTNNA1-214ENST00000519116 HHIPL1Q96JK4 782 aa8.76□□□□□ -1.01
CTNNA1-214ENST00000519116 FMNL2Q96PY5 1086 aa8.76□□□□□ -1.01
CTNNA1-214ENST00000519116 AFDNP55196 1824 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-214ENST00000519116 TRAF5O00463 557 aa8.75□□□□□ -1.01
CTNNA1-214ENST00000519116 RGL2O15211 777 aa8.75□□□□□ -1.01
CTNNA1-214ENST00000519116 HMOX1P09601 288 aa8.75□□□□□ -1.01
CTNNA1-214ENST00000519116 EPS15P42566 896 aa8.75□□□□□ -1.01
CTNNA1-214ENST00000519116 SCNN1DP51172 638 aa8.75□□□□□ -1.01
CTNNA1-214ENST00000519116 FMR1Q06787 632 aaKnown RBP eCLIP8.75□□□□□ -1.01
CTNNA1-214ENST00000519116 GRIPAP1Q4V328 841 aa8.75□□□□□ -1.01
CTNNA1-214ENST00000519116 SAPCD2Q86UD0 394 aa8.75□□□□□ -1.01
CTNNA1-214ENST00000519116 SCN4AP35499 1836 aa8.75□□□□□ -1.01
CTNNA1-214ENST00000519116 ADAMTSL1Q8N6G6 1762 aa8.74□□□□□ -1.01
CTNNA1-214ENST00000519116 CELF2O95319 508 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-214ENST00000519116 IRX5P78411 483 aaPredicted RBP8.74□□□□□ -1.01
CTNNA1-214ENST00000519116 PRPF38BQ5VTL8 546 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-214ENST00000519116 ADARB2Q9NS39 739 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-214ENST00000519116 FBXO3Q9UK99 471 aa8.74□□□□□ -1.01
CTNNA1-214ENST00000519116 FER1L6Q2WGJ9 1857 aa8.74□□□□□ -1.01
CTNNA1-214ENST00000519116 VIRMAQ69YN4 1812 aaKnown RBP8.73□□□□□ -1.01
CTNNA1-214ENST00000519116 THSD7BQ9C0I4 1608 aa8.73□□□□□ -1.01
CTNNA1-214ENST00000519116 PYGBP11216 843 aa8.73□□□□□ -1.01
CTNNA1-214ENST00000519116 GTF2E1P29083 439 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-214ENST00000519116 NOGQ13253 232 aa8.73□□□□□ -1.01
CTNNA1-214ENST00000519116 CIAPIN1Q6FI81 312 aa8.73□□□□□ -1.01
CTNNA1-214ENST00000519116 LARGE2Q8N3Y3 721 aa8.73□□□□□ -1.01
CTNNA1-214ENST00000519116 GAS2L2Q8NHY3 880 aa8.73□□□□□ -1.01
CTNNA1-214ENST00000519116 FAM163AQ96GL9 167 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-214ENST00000519116 NIP7Q9Y221 180 aaKnown RBP eCLIP8.73□□□□□ -1.01
CTNNA1-214ENST00000519116 KNSTRNQ9Y448 316 aa8.73□□□□□ -1.01
CTNNA1-214ENST00000519116 COL11A2P13942 1736 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-214ENST00000519116 GNAT3A8MTJ3 354 aa8.72□□□□□ -1.01
CTNNA1-214ENST00000519116 NIM1KQ8IY84 436 aa8.72□□□□□ -1.01
CTNNA1-214ENST00000519116 IL17REQ8NFR9 667 aa8.72□□□□□ -1.01
CTNNA1-214ENST00000519116 SLX4Q8IY92 1834 aa8.71□□□□□ -1.01
CTNNA1-214ENST00000519116 FAM177BA6PVY3 158 aa8.71□□□□□ -1.02
CTNNA1-214ENST00000519116 BTBD11A6QL63 1104 aa8.71□□□□□ -1.02
CTNNA1-214ENST00000519116 DIAPH1O60610 1272 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-214ENST00000519116 SOX10P56693 466 aa8.71□□□□□ -1.02
CTNNA1-214ENST00000519116 CRY2Q49AN0 593 aa8.71□□□□□ -1.02
CTNNA1-214ENST00000519116 DCAF8Q5TAQ9 597 aa8.71□□□□□ -1.02
CTNNA1-214ENST00000519116 ZC3H15Q8WU90 426 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-214ENST00000519116 NYXQ9GZU5 481 aa8.71□□□□□ -1.02
CTNNA1-214ENST00000519116 SAGE1Q9NXZ1 904 aa8.71□□□□□ -1.02
CTNNA1-214ENST00000519116 GPRC5DQ9NZD1 345 aa8.71□□□□□ -1.02
CTNNA1-214ENST00000519116 DICER1Q9UPY3 1922 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-214ENST00000519116 SCN7AQ01118 1682 aa8.71□□□□□ -1.02
CTNNA1-214ENST00000519116 SNED1Q8TER0 1413 aa8.71□□□□□ -1.02
CTNNA1-214ENST00000519116 ANKRD31Q8N7Z5 1873 aa8.7□□□□□ -1.02
CTNNA1-214ENST00000519116 SNRPA1P09661 255 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-214ENST00000519116 HOXA10P31260 410 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-214ENST00000519116 VASPP50552 380 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-214ENST00000519116 RPGRQ92834 1020 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-214ENST00000519116 GLIS2Q9BZE0 524 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-214ENST00000519116 VPS33BQ9H267 617 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms