RNA–Protein interactions for RNA: ENST00000518855.5

CLINT1-202, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 3,394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-202ENST00000518855 CTIFO43310 598 aaKnown RBP6.23□□□□□ -1.41
CLINT1-202ENST00000518855 HSPA4P34932 840 aa6.23□□□□□ -1.41
CLINT1-202ENST00000518855 TTC14Q96N46 770 aa6.23□□□□□ -1.41
CLINT1-202ENST00000518855 PLEKHG3A1L390 1219 aa6.23□□□□□ -1.41
CLINT1-202ENST00000518855 KIAA2012Q0VF49 1180 aa6.23□□□□□ -1.41
CLINT1-202ENST00000518855 RBM33Q96EV2 1170 aaKnown RBP6.23□□□□□ -1.41
CLINT1-202ENST00000518855 TSPY26PQ9H489 355 aa6.23□□□□□ -1.41
CLINT1-202ENST00000518855 KCND1Q9NSA2 647 aa6.23□□□□□ -1.41
CLINT1-202ENST00000518855 PLEKHG2Q9H7P9 1386 aa6.22□□□□□ -1.41
CLINT1-202ENST00000518855 WDR33Q9C0J8 1336 aaKnown RBP6.22□□□□□ -1.41
CLINT1-202ENST00000518855 ANKARQ7Z5J8 1434 aa6.22□□□□□ -1.41
CLINT1-202ENST00000518855 UQCRHLA0A096LP55 91 aa6.22□□□□□ -1.41
CLINT1-202ENST00000518855 UQCRHP07919 91 aa6.22□□□□□ -1.41
CLINT1-202ENST00000518855 RBM43Q6ZSC3 357 aaKnown RBP6.22□□□□□ -1.41
CLINT1-202ENST00000518855 ZGPATQ8N5A5 531 aaKnown RBP6.22□□□□□ -1.41
CLINT1-202ENST00000518855 ANKRD7Q92527 254 aa6.22□□□□□ -1.41
CLINT1-202ENST00000518855 HCSTQ9UBK5 93 aa6.22□□□□□ -1.41
CLINT1-202ENST00000518855 SPEF2Q9C093 1822 aa6.22□□□□□ -1.41
CLINT1-202ENST00000518855 KIF13AQ9H1H9 1805 aa6.22□□□□□ -1.41
CLINT1-202ENST00000518855 DMTNQ08495 405 aa6.22□□□□□ -1.41
CLINT1-202ENST00000518855 LAMA4Q16363 1823 aa6.22□□□□□ -1.41
CLINT1-202ENST00000518855 ELP1O95163 1332 aa6.22□□□□□ -1.41
CLINT1-202ENST00000518855 CHMLP26374 656 aa6.21□□□□□ -1.41
CLINT1-202ENST00000518855 CCDC183Q5T5S1 534 aa6.21□□□□□ -1.41
CLINT1-202ENST00000518855 IGSF1Q8N6C5 1336 aa6.21□□□□□ -1.41
CLINT1-202ENST00000518855 TTC21AQ8NDW8 1320 aa6.21□□□□□ -1.41
CLINT1-202ENST00000518855 RAD50Q92878 1312 aa6.21□□□□□ -1.41
CLINT1-202ENST00000518855 CDK11BP21127 795 aaKnown RBP6.21□□□□□ -1.42
CLINT1-202ENST00000518855 FAM193AP78312 1265 aa6.21□□□□□ -1.42
CLINT1-202ENST00000518855 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.21□□□□□ -1.42
CLINT1-202ENST00000518855 TM6SF1Q9BZW5 370 aa6.21□□□□□ -1.42
CLINT1-202ENST00000518855 C1orf115Q9H7X2 142 aa6.21□□□□□ -1.42
CLINT1-202ENST00000518855 NSFL1CQ9UNZ2 370 aaKnown RBP6.21□□□□□ -1.42
CLINT1-202ENST00000518855 PLEKHG1Q9ULL1 1385 aa6.21□□□□□ -1.42
CLINT1-202ENST00000518855 PRPF40AO75400 957 aaKnown RBP6.21□□□□□ -1.42
CLINT1-202ENST00000518855 MCCP23508 829 aa6.21□□□□□ -1.42
CLINT1-202ENST00000518855 ATP8B2P98198 1209 aa6.21□□□□□ -1.42
CLINT1-202ENST00000518855 TSR1Q2NL82 804 aaKnown RBP6.21□□□□□ -1.42
CLINT1-202ENST00000518855 SLC4A5Q9BY07 1137 aa6.21□□□□□ -1.42
CLINT1-202ENST00000518855 GTPBP4Q9BZE4 634 aaKnown RBP6.21□□□□□ -1.42
CLINT1-202ENST00000518855 PLA2G2EQ9NZK7 142 aa6.21□□□□□ -1.42
CLINT1-202ENST00000518855 SLIT3O75094 1523 aa6.21□□□□□ -1.42
CLINT1-202ENST00000518855 NFAT5O94916 1531 aa6.21□□□□□ -1.42
CLINT1-202ENST00000518855 MINK1Q8N4C8 1332 aaPredicted RBP6.21□□□□□ -1.42
CLINT1-202ENST00000518855 PARP4Q9UKK3 1724 aaKnown RBP6.2□□□□□ -1.42
CLINT1-202ENST00000518855 LAMB4A4D0S4 1761 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 RAB11FIP3O75154 756 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 MX1P20591 662 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.2□□□□□ -1.42
CLINT1-202ENST00000518855 METP08581 1390 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 CEMIPQ8WUJ3 1361 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 UBE2HP62256 183 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 C6orf132Q5T0Z8 1188 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 SSH3Q8TE77 659 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 EMILIN1Q9Y6C2 1016 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 RFX7Q2KHR2 1363 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 SYCE3A1L190 88 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 PPP1R3GB7ZBB8 358 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 HOXB7P09629 217 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 MTX1Q13505 466 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 EIF4A2Q14240 407 aaKnown RBP6.2□□□□□ -1.42
CLINT1-202ENST00000518855 TYW1BQ6NUM6 668 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 GGT6Q6P531 493 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 TICAM2Q86XR7 235 aa6.2□□□□□ -1.42
CLINT1-202ENST00000518855 C16orf71Q8IYS4 520 aaPredicted RBP6.2□□□□□ -1.42
CLINT1-202ENST00000518855 OTUD7AQ8TE49 926 aaPredicted RBP6.2□□□□□ -1.42
CLINT1-202ENST00000518855 FLT4P35916 1363 aa6.19□□□□□ -1.42
CLINT1-202ENST00000518855 GNAI3P08754 354 aa6.19□□□□□ -1.42
CLINT1-202ENST00000518855 ZSCAN20P17040 1043 aaPredicted RBP6.19□□□□□ -1.42
CLINT1-202ENST00000518855 MEIS3Q99687 375 aa6.19□□□□□ -1.42
CLINT1-202ENST00000518855 FAM53CQ9NYF3 392 aa6.19□□□□□ -1.42
CLINT1-202ENST00000518855 MST1RQ04912 1400 aa6.19□□□□□ -1.42
CLINT1-202ENST00000518855 GIGYF1O75420 1035 aaPredicted RBP6.19□□□□□ -1.42
CLINT1-202ENST00000518855 KIF20AO95235 890 aa6.19□□□□□ -1.42
CLINT1-202ENST00000518855 GNAI2P04899 355 aa6.19□□□□□ -1.42
CLINT1-202ENST00000518855 CDC25BP30305 580 aa6.19□□□□□ -1.42
CLINT1-202ENST00000518855 PDIA6Q15084 440 aa6.19□□□□□ -1.42
CLINT1-202ENST00000518855 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.19□□□□□ -1.42
CLINT1-202ENST00000518855 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.19□□□□□ -1.42
CLINT1-202ENST00000518855 KIAA1524Q8TCG1 905 aa6.19□□□□□ -1.42
CLINT1-202ENST00000518855 COG3Q96JB2 828 aa6.19□□□□□ -1.42
CLINT1-202ENST00000518855 RBM27Q9P2N5 1060 aaKnown RBP6.19□□□□□ -1.42
CLINT1-202ENST00000518855 R3HCC1Q9Y3T6 440 aaKnown RBP6.19□□□□□ -1.42
CLINT1-202ENST00000518855 PRR36Q9H6K5 1346 aa6.19□□□□□ -1.42
CLINT1-202ENST00000518855 SCN11AQ9UI33 1791 aa6.18□□□□□ -1.42
CLINT1-202ENST00000518855 KDM4AO75164 1064 aa6.18□□□□□ -1.42
CLINT1-202ENST00000518855 XPCQ01831 940 aaPredicted RBP6.18□□□□□ -1.42
CLINT1-202ENST00000518855 E2F4Q16254 413 aa6.18□□□□□ -1.42
CLINT1-202ENST00000518855 PI4K2BQ8TCG2 481 aa6.18□□□□□ -1.42
CLINT1-202ENST00000518855 LRRCC1Q9C099 1032 aa6.18□□□□□ -1.42
CLINT1-202ENST00000518855 SEPT9Q9UHD8 586 aaPredicted RBP6.18□□□□□ -1.42
CLINT1-202ENST00000518855 TTC41PQ6P2S7 1318 aa6.18□□□□□ -1.42
CLINT1-202ENST00000518855 COL15A1P39059 1388 aa6.18□□□□□ -1.42
CLINT1-202ENST00000518855 TMEM94Q12767 1356 aa6.18□□□□□ -1.42
CLINT1-202ENST00000518855 ZSCAN22P10073 491 aaPredicted RBP6.18□□□□□ -1.42
CLINT1-202ENST00000518855 NOLC1Q14978 699 aaKnown RBP eCLIP6.18□□□□□ -1.42
CLINT1-202ENST00000518855 THSD4Q6ZMP0 1018 aa6.18□□□□□ -1.42
CLINT1-202ENST00000518855 RGS22Q8NE09 1264 aa6.18□□□□□ -1.42
CLINT1-202ENST00000518855 WNT2BQ93097 391 aa6.18□□□□□ -1.42
CLINT1-202ENST00000518855 LSG1Q9H089 658 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms