RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 RGL4Q8IZJ4 473 aa5.36□□□□□ -1.55
SKP1-203ENST00000517625 GJD3Q8N144 294 aa5.36□□□□□ -1.55
SKP1-203ENST00000517625 CEP63Q96MT8 703 aa5.36□□□□□ -1.55
SKP1-203ENST00000517625 ASB16Q96NS5 453 aa5.36□□□□□ -1.55
SKP1-203ENST00000517625 ZCCHC2Q9C0B9 1178 aaKnown RBP5.36□□□□□ -1.55
SKP1-203ENST00000517625 BRD7Q9NPI1 651 aa5.36□□□□□ -1.55
SKP1-203ENST00000517625 NDFIP2Q9NV92 336 aa5.36□□□□□ -1.55
SKP1-203ENST00000517625 NXF1Q9UBU9 619 aaKnown RBP5.36□□□□□ -1.55
SKP1-203ENST00000517625 PDGFAP04085 211 aa5.35□□□□□ -1.55
SKP1-203ENST00000517625 NEFLP07196 543 aa5.35□□□□□ -1.55
SKP1-203ENST00000517625 THBS1P07996 1170 aa5.35□□□□□ -1.55
SKP1-203ENST00000517625 VSIG8P0DPA2 414 aa5.35□□□□□ -1.55
SKP1-203ENST00000517625 MAPK1P28482 360 aa5.35□□□□□ -1.55
SKP1-203ENST00000517625 AAMPQ13685 434 aa5.35□□□□□ -1.55
SKP1-203ENST00000517625 DBN1Q16643 649 aa5.35□□□□□ -1.55
SKP1-203ENST00000517625 TTC16Q8NEE8 873 aa5.35□□□□□ -1.55
SKP1-203ENST00000517625 FAM129BQ96TA1 746 aa5.35□□□□□ -1.55
SKP1-203ENST00000517625 H3BM21 787 aa5.34□□□□□ -1.55
SKP1-203ENST00000517625 OPLAHO14841 1288 aa5.34□□□□□ -1.55
SKP1-203ENST00000517625 ZBTB39O15060 712 aa5.34□□□□□ -1.55
SKP1-203ENST00000517625 FGD1P98174 961 aa5.34□□□□□ -1.55
SKP1-203ENST00000517625 TNP2Q05952 138 aa5.34□□□□□ -1.55
SKP1-203ENST00000517625 FAM26DQ5JW98 314 aa5.34□□□□□ -1.55
SKP1-203ENST00000517625 PDE12Q6L8Q7 609 aaKnown RBP5.34□□□□□ -1.55
SKP1-203ENST00000517625 XKR5Q6UX68 686 aa5.34□□□□□ -1.55
SKP1-203ENST00000517625 DNAJC14Q6Y2X3 702 aaPredicted RBP5.34□□□□□ -1.55
SKP1-203ENST00000517625 EDEM1Q92611 657 aa5.34□□□□□ -1.55
SKP1-203ENST00000517625 ALKBH8Q96BT7 664 aaKnown RBP5.34□□□□□ -1.55
SKP1-203ENST00000517625 CUEDC1Q9NWM3 386 aaPredicted RBP5.34□□□□□ -1.55
SKP1-203ENST00000517625 KCNH4Q9UQ05 1017 aa5.34□□□□□ -1.55
SKP1-203ENST00000517625 RTCBQ9Y3I0 505 aaKnown RBP5.34□□□□□ -1.55
SKP1-203ENST00000517625 KHNYNO15037 678 aaKnown RBP5.33□□□□□ -1.56
SKP1-203ENST00000517625 MAPTP10636 758 aaKnown RBP5.33□□□□□ -1.56
SKP1-203ENST00000517625 DNM1Q05193 864 aaKnown RBP5.33□□□□□ -1.56
SKP1-203ENST00000517625 NEUROD1Q13562 356 aa5.33□□□□□ -1.56
SKP1-203ENST00000517625 ZNF787Q6DD87 383 aa5.33□□□□□ -1.56
SKP1-203ENST00000517625 SLC16A10Q8TF71 515 aa5.33□□□□□ -1.56
SKP1-203ENST00000517625 AVENQ9NQS1 362 aaPredicted RBP5.33□□□□□ -1.56
SKP1-203ENST00000517625 AMOTL2Q9Y2J4 779 aa5.33□□□□□ -1.56
SKP1-203ENST00000517625 DCDC2BA2VCK2 349 aa5.32□□□□□ -1.56
SKP1-203ENST00000517625 CDC14CA4D256 554 aa5.32□□□□□ -1.56
SKP1-203ENST00000517625 POTECB2RU33 542 aa5.32□□□□□ -1.56
SKP1-203ENST00000517625 BNIP3LO60238 219 aa5.32□□□□□ -1.56
SKP1-203ENST00000517625 ATCAYQ86WG3 371 aa5.32□□□□□ -1.56
SKP1-203ENST00000517625 GPR152Q8TDT2 470 aa5.32□□□□□ -1.56
SKP1-203ENST00000517625 GTPBP3Q969Y2 492 aaKnown RBP5.32□□□□□ -1.56
SKP1-203ENST00000517625 NUDT16Q96DE0 195 aaKnown RBP5.32□□□□□ -1.56
SKP1-203ENST00000517625 KLRG1Q96E93 195 aa5.32□□□□□ -1.56
SKP1-203ENST00000517625 CCDC87Q9NVE4 849 aa5.32□□□□□ -1.56
SKP1-203ENST00000517625 MARK1Q9P0L2 795 aa5.32□□□□□ -1.56
SKP1-203ENST00000517625 POLIQ9UNA4 740 aa5.32□□□□□ -1.56
SKP1-203ENST00000517625 NSFL1CQ9UNZ2 370 aaKnown RBP5.32□□□□□ -1.56
SKP1-203ENST00000517625 TREHO43280 583 aa5.31□□□□□ -1.56
SKP1-203ENST00000517625 FGFR3P22607 806 aa5.31□□□□□ -1.56
SKP1-203ENST00000517625 TMC7Q7Z402 723 aa5.31□□□□□ -1.56
SKP1-203ENST00000517625 VWA5B2Q8N398 1253 aa5.31□□□□□ -1.56
SKP1-203ENST00000517625 ABHD17AQ96GS6 310 aa5.31□□□□□ -1.56
SKP1-203ENST00000517625 KCNMB2Q9Y691 235 aa5.31□□□□□ -1.56
SKP1-203ENST00000517625 UBAP1LF5GYI3 381 aa5.3□□□□□ -1.56
SKP1-203ENST00000517625 TERTO14746 1132 aaKnown RBP5.3□□□□□ -1.56
SKP1-203ENST00000517625 XYLBO75191 536 aa5.3□□□□□ -1.56
SKP1-203ENST00000517625 MAP3K6O95382 1288 aa5.3□□□□□ -1.56
SKP1-203ENST00000517625 IGHA2P01877 340 aa5.3□□□□□ -1.56
SKP1-203ENST00000517625 MAP2K3P46734 347 aa5.3□□□□□ -1.56
SKP1-203ENST00000517625 FMR1Q06787 632 aaKnown RBP eCLIP5.3□□□□□ -1.56
SKP1-203ENST00000517625 CCINQ13939 588 aa5.3□□□□□ -1.56
SKP1-203ENST00000517625 TRIP4Q15650 581 aaPredicted RBP5.3□□□□□ -1.56
SKP1-203ENST00000517625 NLRP13Q86W25 1043 aa5.3□□□□□ -1.56
SKP1-203ENST00000517625 CMTR1Q8N1G2 835 aaKnown RBP5.3□□□□□ -1.56
SKP1-203ENST00000517625 TMC1Q8TDI8 760 aa5.3□□□□□ -1.56
SKP1-203ENST00000517625 SNX29Q8TEQ0 813 aa5.3□□□□□ -1.56
SKP1-203ENST00000517625 IRF7Q92985 503 aa5.3□□□□□ -1.56
SKP1-203ENST00000517625 BCL11AQ9H165 835 aa5.3□□□□□ -1.56
SKP1-203ENST00000517625 DNAJC25Q9H1X3 360 aa5.3□□□□□ -1.56
SKP1-203ENST00000517625 ANKRD33BA6NCL7 494 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 GPR182O15218 404 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 HOXD8P13378 290 aaPredicted RBP5.29□□□□□ -1.56
SKP1-203ENST00000517625 GRNP28799 593 aaKnown RBP5.29□□□□□ -1.56
SKP1-203ENST00000517625 SOX18P35713 384 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 ITGAEP38570 1179 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 SPEM2Q0P670 501 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 SFSWAPQ12872 951 aaKnown RBP5.29□□□□□ -1.56
SKP1-203ENST00000517625 DSC3Q14574 896 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 PCSK7Q16549 785 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 ZNF438Q7Z4V0 828 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 NPAS4Q8IUM7 802 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 RGS22Q8NE09 1264 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 PMEPA1Q969W9 287 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 PNMA5Q96PV4 448 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 GSX2Q9BZM3 304 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 MBIPQ9NS73 344 aa5.29□□□□□ -1.56
SKP1-203ENST00000517625 ARAFP10398 606 aa5.28□□□□□ -1.56
SKP1-203ENST00000517625 MX2P20592 715 aa5.28□□□□□ -1.56
SKP1-203ENST00000517625 NFX1Q12986 1120 aaKnown RBP5.28□□□□□ -1.56
SKP1-203ENST00000517625 C8orf34Q49A92 452 aa5.28□□□□□ -1.56
SKP1-203ENST00000517625 ZNF468Q5VIY5 522 aaPredicted RBP5.28□□□□□ -1.56
SKP1-203ENST00000517625 FBF1Q8TES7 1133 aa5.28□□□□□ -1.56
SKP1-203ENST00000517625 ELP3Q9H9T3 547 aa5.28□□□□□ -1.56
SKP1-203ENST00000517625 ABI2Q9NYB9 513 aaPredicted RBP5.28□□□□□ -1.56
SKP1-203ENST00000517625 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms