RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 NECTIN1Q15223 517 aa15.42■□□□□ 0.06
PHF3-212ENST00000515594 SLFNL1Q499Z3 407 aa15.42■□□□□ 0.06
PHF3-212ENST00000515594 BICC1Q9H694 974 aaKnown RBP15.42■□□□□ 0.06
PHF3-212ENST00000515594 NRBP1Q9UHY1 535 aa15.42■□□□□ 0.06
PHF3-212ENST00000515594 PTGS1P23219 599 aa15.41■□□□□ 0.06
PHF3-212ENST00000515594 CEBPZQ03701 1054 aaKnown RBP15.41■□□□□ 0.06
PHF3-212ENST00000515594 FAM184AQ8NB25 1140 aa15.41■□□□□ 0.06
PHF3-212ENST00000515594 MYRIPQ8NFW9 859 aa15.41■□□□□ 0.06
PHF3-212ENST00000515594 ZSWIM6Q9HCJ5 1215 aa15.41■□□□□ 0.06
PHF3-212ENST00000515594 JAK2O60674 1132 aa15.41■□□□□ 0.06
PHF3-212ENST00000515594 SLC39A6Q13433 755 aa15.4■□□□□ 0.06
PHF3-212ENST00000515594 LARP1Q6PKG0 1096 aaKnown RBP15.4■□□□□ 0.06
PHF3-212ENST00000515594 PXDNLA1KZ92 1463 aa15.4■□□□□ 0.06
PHF3-212ENST00000515594 MARF1Q9Y4F3 1742 aaKnown RBP15.4■□□□□ 0.06
PHF3-212ENST00000515594 VPS53Q5VIR6 699 aa15.4■□□□□ 0.06
PHF3-212ENST00000515594 CCDC129Q6ZRS4 1044 aa15.4■□□□□ 0.06
PHF3-212ENST00000515594 DACT1Q9NYF0 836 aa15.4■□□□□ 0.06
PHF3-212ENST00000515594 SLC27A2O14975 620 aa15.4■□□□□ 0.06
PHF3-212ENST00000515594 MYL6BP14649 208 aa15.4■□□□□ 0.06
PHF3-212ENST00000515594 FSD1Q9BTV5 496 aa15.4■□□□□ 0.06
PHF3-212ENST00000515594 PXDNQ92626 1479 aa15.39■□□□□ 0.05
PHF3-212ENST00000515594 CBX1P83916 185 aa15.39■□□□□ 0.05
PHF3-212ENST00000515594 CEMIPQ8WUJ3 1361 aa15.39■□□□□ 0.05
PHF3-212ENST00000515594 UVSSAQ2YD98 709 aa15.39■□□□□ 0.05
PHF3-212ENST00000515594 SEC62Q99442 399 aaKnown RBP15.39■□□□□ 0.05
PHF3-212ENST00000515594 SPDYE4A6NLX3 237 aa15.38■□□□□ 0.05
PHF3-212ENST00000515594 FTOQ9C0B1 505 aaKnown RBP eCLIP15.38■□□□□ 0.05
PHF3-212ENST00000515594 ZKSCAN1P17029 563 aaPredicted RBP15.38■□□□□ 0.05
PHF3-212ENST00000515594 ZHX1Q9UKY1 873 aaPredicted RBP15.38■□□□□ 0.05
PHF3-212ENST00000515594 MRVI1Q9Y6F6 885 aa15.38■□□□□ 0.05
PHF3-212ENST00000515594 TTC41PQ6P2S7 1318 aa15.38■□□□□ 0.05
PHF3-212ENST00000515594 EPHA10Q5JZY3 1008 aa15.37■□□□□ 0.05
PHF3-212ENST00000515594 RUFY2Q8WXA3 655 aa15.37■□□□□ 0.05
PHF3-212ENST00000515594 ANO6Q4KMQ2 910 aa15.37■□□□□ 0.05
PHF3-212ENST00000515594 FBXW7Q969H0 707 aa15.37■□□□□ 0.05
PHF3-212ENST00000515594 BCL2L12Q9HB09 334 aa15.37■□□□□ 0.05
PHF3-212ENST00000515594 ATP6V1DQ9Y5K8 247 aa15.37■□□□□ 0.05
PHF3-212ENST00000515594 LTN1O94822 1766 aa15.37■□□□□ 0.05
PHF3-212ENST00000515594 N4BP2Q86UW6 1770 aaPredicted RBP15.37■□□□□ 0.05
PHF3-212ENST00000515594 RIOK3O14730 519 aaKnown RBP15.37■□□□□ 0.05
PHF3-212ENST00000515594 TYRO3Q06418 890 aa15.37■□□□□ 0.05
PHF3-212ENST00000515594 TOB2Q14106 344 aaPredicted RBP15.37■□□□□ 0.05
PHF3-212ENST00000515594 ERCC4Q92889 916 aaPredicted RBP15.37■□□□□ 0.05
PHF3-212ENST00000515594 DBF4Q9UBU7 674 aaPredicted RBP15.37■□□□□ 0.05
PHF3-212ENST00000515594 NR1I2O75469 434 aa15.36■□□□□ 0.05
PHF3-212ENST00000515594 KIAA1524Q8TCG1 905 aa15.36■□□□□ 0.05
PHF3-212ENST00000515594 NUP62CLQ9H1M0 184 aa15.36■□□□□ 0.05
PHF3-212ENST00000515594 GIGYF1O75420 1035 aaPredicted RBP15.36■□□□□ 0.05
PHF3-212ENST00000515594 NAA30Q147X3 362 aaPredicted RBP15.36■□□□□ 0.05
PHF3-212ENST00000515594 ATP2B3Q16720 1220 aa15.36■□□□□ 0.05
PHF3-212ENST00000515594 HSP90AB4PQ58FF6 505 aa15.36■□□□□ 0.05
PHF3-212ENST00000515594 MAP4K1Q92918 833 aa15.36■□□□□ 0.05
PHF3-212ENST00000515594 EVI5LQ96CN4 794 aa15.36■□□□□ 0.05
PHF3-212ENST00000515594 IGSF3O75054 1194 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 CCDC192P0DO97 292 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 ESCO1Q5FWF5 840 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 BLOC1S2Q6QNY1 142 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 CCDC186Q7Z3E2 898 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 C16orf45Q96MC5 204 aaPredicted RBP15.35■□□□□ 0.05
PHF3-212ENST00000515594 COL15A1P39059 1388 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 KRT85P78386 507 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 DRC7Q8IY82 874 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 IP6K1Q92551 441 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 DNAJC25Q9H1X3 360 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 PRDM4Q9UKN5 801 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 PHF8Q9UPP1 1060 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 A0A0G2JLW4 131 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 GRM8O00222 908 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 G3BP1Q13283 466 aaKnown RBP eCLIP15.35■□□□□ 0.05
PHF3-212ENST00000515594 MAP3K11Q16584 847 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 SPATA32Q96LK8 384 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 CBX8Q9HC52 389 aa15.35■□□□□ 0.05
PHF3-212ENST00000515594 USP42Q9H9J4 1324 aaKnown RBP15.35■□□□□ 0.05
PHF3-212ENST00000515594 IGKV5-2P06315 115 aa15.34■□□□□ 0.05
PHF3-212ENST00000515594 PPP4R3BQ5MIZ7 849 aa15.34■□□□□ 0.05
PHF3-212ENST00000515594 KSR2Q6VAB6 950 aa15.34■□□□□ 0.05
PHF3-212ENST00000515594 TNMDQ9H2S6 317 aa15.34■□□□□ 0.05
PHF3-212ENST00000515594 SH2B1Q9NRF2 756 aaPredicted RBP15.34■□□□□ 0.05
PHF3-212ENST00000515594 TBX22Q9Y458 520 aa15.34■□□□□ 0.05
PHF3-212ENST00000515594 RNMTO43148 476 aaKnown RBP15.34■□□□□ 0.05
PHF3-212ENST00000515594 ARID5BQ14865 1188 aa15.34■□□□□ 0.05
PHF3-212ENST00000515594 GPATCH3Q96I76 525 aa15.34■□□□□ 0.05
PHF3-212ENST00000515594 PGBD1Q96JS3 809 aa15.34■□□□□ 0.05
PHF3-212ENST00000515594 DNAJC2Q99543 621 aaKnown RBP15.34■□□□□ 0.05
PHF3-212ENST00000515594 SPTLC3Q9NUV7 552 aa15.34■□□□□ 0.05
PHF3-212ENST00000515594 TAOK2Q9UL54 1235 aa15.34■□□□□ 0.05
PHF3-212ENST00000515594 KIF3AQ9Y496 699 aa15.34■□□□□ 0.05
PHF3-212ENST00000515594 NPHP4O75161 1426 aaPredicted RBP15.34■□□□□ 0.05
PHF3-212ENST00000515594 CRYBG1Q9Y4K1 1723 aa15.34■□□□□ 0.05
PHF3-212ENST00000515594 GOLGA6L4A6NEF3 574 aa15.33■□□□□ 0.05
PHF3-212ENST00000515594 LETM1O95202 739 aaPredicted RBP15.33■□□□□ 0.05
PHF3-212ENST00000515594 BICD2Q8TD16 824 aa15.33■□□□□ 0.05
PHF3-212ENST00000515594 MAP7D2Q96T17 732 aa15.33■□□□□ 0.05
PHF3-212ENST00000515594 PSME1Q06323 249 aa15.33■□□□□ 0.04
PHF3-212ENST00000515594 AXIN2Q9Y2T1 843 aa15.33■□□□□ 0.04
PHF3-212ENST00000515594 MTX1Q13505 466 aa15.32■□□□□ 0.04
PHF3-212ENST00000515594 FAM200AQ8TCP9 573 aa15.32■□□□□ 0.04
PHF3-212ENST00000515594 ZSCAN31Q96LW9 406 aaPredicted RBP15.32■□□□□ 0.04
PHF3-212ENST00000515594 EPB41L2O43491 1005 aaKnown RBP15.32■□□□□ 0.04
PHF3-212ENST00000515594 RPS6KB1P23443 525 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms