RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 ZNF622Q969S3 477 aaKnown RBP eCLIP12.49□□□□□ -0.41
RACK1-234ENST00000515417 PIM2Q9P1W9 311 aa12.49□□□□□ -0.41
RACK1-234ENST00000515417 ZNF219Q9P2Y4 722 aaPredicted RBP12.49□□□□□ -0.41
RACK1-234ENST00000515417 E9PSI1 815 aa12.48□□□□□ -0.41
RACK1-234ENST00000515417 SLC4A2P04920 1241 aa12.48□□□□□ -0.41
RACK1-234ENST00000515417 PDE6BP35913 854 aa12.48□□□□□ -0.41
RACK1-234ENST00000515417 APLP1P51693 650 aa12.48□□□□□ -0.41
RACK1-234ENST00000515417 HNRNPUQ00839 825 aaKnown RBP eCLIP12.48□□□□□ -0.41
RACK1-234ENST00000515417 SLFN5Q08AF3 891 aa12.48□□□□□ -0.41
RACK1-234ENST00000515417 C9orf131Q5VYM1 1079 aa12.48□□□□□ -0.41
RACK1-234ENST00000515417 MYD88Q99836 296 aa12.48□□□□□ -0.41
RACK1-234ENST00000515417 UTP14AQ9BVJ6 771 aaKnown RBP12.48□□□□□ -0.41
RACK1-234ENST00000515417 COL11A2P13942 1736 aaPredicted RBP12.48□□□□□ -0.41
RACK1-234ENST00000515417 HCLS1P14317 486 aaPredicted RBP12.47□□□□□ -0.41
RACK1-234ENST00000515417 PARP10Q53GL7 1025 aa12.47□□□□□ -0.41
RACK1-234ENST00000515417 HSP90AB3PQ58FF7 597 aa12.47□□□□□ -0.41
RACK1-234ENST00000515417 RTL5Q5HYW3 569 aaPredicted RBP12.47□□□□□ -0.41
RACK1-234ENST00000515417 NYXQ9GZU5 481 aa12.47□□□□□ -0.41
RACK1-234ENST00000515417 MAP3K2Q9Y2U5 619 aa12.47□□□□□ -0.41
RACK1-234ENST00000515417 TNRC6CQ9HCJ0 1690 aaKnown RBP12.47□□□□□ -0.41
RACK1-234ENST00000515417 IBTKQ9P2D0 1353 aaPredicted RBP12.46□□□□□ -0.41
RACK1-234ENST00000515417 PI4KAP2A4QPH2 592 aa12.46□□□□□ -0.41
RACK1-234ENST00000515417 SRGNP10124 158 aa12.46□□□□□ -0.41
RACK1-234ENST00000515417 FLIIQ13045 1269 aa12.46□□□□□ -0.41
RACK1-234ENST00000515417 PPP1R42Q7Z4L9 355 aa12.46□□□□□ -0.41
RACK1-234ENST00000515417 SLC51AQ86UW1 340 aa12.46□□□□□ -0.41
RACK1-234ENST00000515417 TTLL6Q8N841 843 aa12.46□□□□□ -0.41
RACK1-234ENST00000515417 PI4KAP1Q8N8J0 262 aa12.46□□□□□ -0.41
RACK1-234ENST00000515417 JARID2Q92833 1246 aaPredicted RBP12.46□□□□□ -0.41
RACK1-234ENST00000515417 ISCA1Q9BUE6 129 aa12.46□□□□□ -0.41
RACK1-234ENST00000515417 RRAGCQ9HB90 399 aa12.46□□□□□ -0.41
RACK1-234ENST00000515417 TRMT112Q9UI30 125 aaKnown RBP12.46□□□□□ -0.41
RACK1-234ENST00000515417 PRELPP51888 382 aa12.45□□□□□ -0.42
RACK1-234ENST00000515417 BCL2L13Q9BXK5 485 aa12.45□□□□□ -0.42
RACK1-234ENST00000515417 BRCA1P38398 1863 aaKnown RBP12.44□□□□□ -0.42
RACK1-234ENST00000515417 ARFGEF2Q9Y6D5 1785 aa12.44□□□□□ -0.42
RACK1-234ENST00000515417 DDX58O95786 925 aaKnown RBP12.44□□□□□ -0.42
RACK1-234ENST00000515417 RASSF7Q02833 373 aa12.44□□□□□ -0.42
RACK1-234ENST00000515417 FKBP5Q13451 457 aaPredicted RBP12.44□□□□□ -0.42
RACK1-234ENST00000515417 PRPF40BQ6NWY9 871 aaKnown RBP12.44□□□□□ -0.42
RACK1-234ENST00000515417 OLFM4Q6UX06 510 aa12.44□□□□□ -0.42
RACK1-234ENST00000515417 KSR2Q6VAB6 950 aa12.44□□□□□ -0.42
RACK1-234ENST00000515417 FAM89AQ96GI7 184 aa12.44□□□□□ -0.42
RACK1-234ENST00000515417 MASTLQ96GX5 879 aa12.44□□□□□ -0.42
RACK1-234ENST00000515417 METTL22Q9BUU2 404 aaPredicted RBP12.44□□□□□ -0.42
RACK1-234ENST00000515417 CHMP4AQ9BY43 222 aa12.44□□□□□ -0.42
RACK1-234ENST00000515417 WDR90Q96KV7 1748 aa12.44□□□□□ -0.42
RACK1-234ENST00000515417 SH3TC1Q8TE82 1336 aa12.43□□□□□ -0.42
RACK1-234ENST00000515417 KLRG2A4D1S0 409 aaPredicted RBP12.43□□□□□ -0.42
RACK1-234ENST00000515417 F6X3S4 739 aa12.43□□□□□ -0.42
RACK1-234ENST00000515417 C21orf2O43822 256 aa12.43□□□□□ -0.42
RACK1-234ENST00000515417 IGKV5-2P06315 115 aa12.43□□□□□ -0.42
RACK1-234ENST00000515417 NPR1P16066 1061 aa12.43□□□□□ -0.42
RACK1-234ENST00000515417 CWF19L2Q2TBE0 894 aaKnown RBP12.43□□□□□ -0.42
RACK1-234ENST00000515417 STYK1Q6J9G0 422 aa12.43□□□□□ -0.42
RACK1-234ENST00000515417 TRMT2AQ8IZ69 625 aaKnown RBP12.43□□□□□ -0.42
RACK1-234ENST00000515417 RNF181Q9P0P0 153 aa12.43□□□□□ -0.42
RACK1-234ENST00000515417 ANKRD36CQ5JPF3 1778 aa12.43□□□□□ -0.42
RACK1-234ENST00000515417 SSH1Q8WYL5 1049 aa12.42□□□□□ -0.42
RACK1-234ENST00000515417 RPGRQ92834 1020 aaKnown RBP12.42□□□□□ -0.42
RACK1-234ENST00000515417 KLRG1Q96E93 195 aa12.42□□□□□ -0.42
RACK1-234ENST00000515417 DLEC1Q9Y238 1755 aa12.42□□□□□ -0.42
RACK1-234ENST00000515417 TRIM28Q13263 835 aaKnown RBP12.41□□□□□ -0.42
RACK1-234ENST00000515417 CRY2Q49AN0 593 aa12.41□□□□□ -0.42
RACK1-234ENST00000515417 RIC1Q4ADV7 1423 aa12.41□□□□□ -0.42
RACK1-234ENST00000515417 MRPL50Q8N5N7 158 aaKnown RBP12.41□□□□□ -0.42
RACK1-234ENST00000515417 RBM46Q8TBY0 533 aaKnown RBP12.41□□□□□ -0.42
RACK1-234ENST00000515417 DNAAF4Q8WXU2 420 aa12.41□□□□□ -0.42
RACK1-234ENST00000515417 CNKSR1Q969H4 720 aa12.41□□□□□ -0.42
RACK1-234ENST00000515417 CWC25Q9NXE8 425 aaPredicted RBP12.41□□□□□ -0.42
RACK1-234ENST00000515417 PDZRN3Q9UPQ7 1066 aa12.41□□□□□ -0.42
RACK1-234ENST00000515417 SLX4Q8IY92 1834 aa12.4□□□□□ -0.42
RACK1-234ENST00000515417 NEURL1BA8MQ27 555 aa12.4□□□□□ -0.42
RACK1-234ENST00000515417 NFKBIEO00221 500 aa12.4□□□□□ -0.42
RACK1-234ENST00000515417 IRS4O14654 1257 aaPredicted RBP12.4□□□□□ -0.42
RACK1-234ENST00000515417 SLC10A5Q5PT55 438 aa12.4□□□□□ -0.42
RACK1-234ENST00000515417 NLRP3Q96P20 1036 aa12.4□□□□□ -0.42
RACK1-234ENST00000515417 RNF123Q5XPI4 1314 aa12.39□□□□□ -0.43
RACK1-234ENST00000515417 NEXNQ0ZGT2 675 aa12.39□□□□□ -0.43
RACK1-234ENST00000515417 ZBTB38Q8NAP3 1195 aaPredicted RBP12.39□□□□□ -0.43
RACK1-234ENST00000515417 CCDC191Q8NCU4 936 aa12.39□□□□□ -0.43
RACK1-234ENST00000515417 RBM17Q96I25 401 aaKnown RBP12.39□□□□□ -0.43
RACK1-234ENST00000515417 CCDC85AQ96PX6 553 aaPredicted RBP12.39□□□□□ -0.43
RACK1-234ENST00000515417 SMC4Q9NTJ3 1288 aa12.39□□□□□ -0.43
RACK1-234ENST00000515417 ARFGEF1Q9Y6D6 1849 aa12.39□□□□□ -0.43
RACK1-234ENST00000515417 ABCC4O15439 1325 aa12.38□□□□□ -0.43
RACK1-234ENST00000515417 PCCAP05165 728 aaPredicted RBP12.38□□□□□ -0.43
RACK1-234ENST00000515417 HOXA10P31260 410 aaPredicted RBP12.38□□□□□ -0.43
RACK1-234ENST00000515417 C16orf71Q8IYS4 520 aaPredicted RBP12.38□□□□□ -0.43
RACK1-234ENST00000515417 JMYQ8N9B5 988 aa12.38□□□□□ -0.43
RACK1-234ENST00000515417 C7orf43Q8WVR3 580 aa12.38□□□□□ -0.43
RACK1-234ENST00000515417 SBF1O95248 1867 aa12.38□□□□□ -0.43
RACK1-234ENST00000515417 PPEF1O14829 653 aaPredicted RBP12.37□□□□□ -0.43
RACK1-234ENST00000515417 SLC4A10Q6U841 1118 aa12.37□□□□□ -0.43
RACK1-234ENST00000515417 UBE3BQ7Z3V4 1068 aa12.37□□□□□ -0.43
RACK1-234ENST00000515417 CACNA1SQ13698 1873 aa12.37□□□□□ -0.43
RACK1-234ENST00000515417 ZBED9Q6R2W3 1325 aa12.37□□□□□ -0.43
RACK1-234ENST00000515417 COL4A1P02462 1669 aa12.36□□□□□ -0.43
RACK1-234ENST00000515417 ALDH1B1P30837 517 aa12.36□□□□□ -0.43
RACK1-234ENST00000515417 GCKRQ14397 625 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms