RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 MKI67P46013 3256 aaKnown RBP16.25■□□□□ 0.19
SMAD5-210ENST00000515005 NPM2Q86SE8 214 aaKnown RBP16.24■□□□□ 0.19
SMAD5-210ENST00000515005 SLC51AQ86UW1 340 aa16.24■□□□□ 0.19
SMAD5-210ENST00000515005 NIM1KQ8IY84 436 aa16.24■□□□□ 0.19
SMAD5-210ENST00000515005 TTC5Q8N0Z6 440 aa16.24■□□□□ 0.19
SMAD5-210ENST00000515005 FAM177BA6PVY3 158 aa16.23■□□□□ 0.19
SMAD5-210ENST00000515005 GMPSP49915 693 aaPredicted RBP16.23■□□□□ 0.19
SMAD5-210ENST00000515005 PKN2Q16513 984 aaKnown RBP16.23■□□□□ 0.19
SMAD5-210ENST00000515005 TPTE2Q6XPS3 522 aa16.23■□□□□ 0.19
SMAD5-210ENST00000515005 USP48Q86UV5 1035 aa16.23■□□□□ 0.19
SMAD5-210ENST00000515005 ZC3H15Q8WU90 426 aaKnown RBP16.23■□□□□ 0.19
SMAD5-210ENST00000515005 CCDC102AQ96A19 550 aa16.23■□□□□ 0.19
SMAD5-210ENST00000515005 CSRNP1Q96S65 589 aa16.23■□□□□ 0.19
SMAD5-210ENST00000515005 HEG1Q9ULI3 1381 aa16.23■□□□□ 0.19
SMAD5-210ENST00000515005 POLR2AP24928 1970 aaKnown RBP16.22■□□□□ 0.19
SMAD5-210ENST00000515005 CC2D2BQ6DHV5 1058 aa16.22■□□□□ 0.19
SMAD5-210ENST00000515005 TEX13AQ9BXU3 409 aaPredicted RBP16.22■□□□□ 0.19
SMAD5-210ENST00000515005 TRIOBPQ9H2D6 2365 aa16.22■□□□□ 0.19
SMAD5-210ENST00000515005 NPC1L1Q9UHC9 1359 aa16.22■□□□□ 0.19
SMAD5-210ENST00000515005 CUL9Q8IWT3 2517 aa16.21■□□□□ 0.19
SMAD5-210ENST00000515005 PIP4K2AP48426 406 aaPredicted RBP16.21■□□□□ 0.19
SMAD5-210ENST00000515005 ZNF157P51786 506 aaPredicted RBP16.21■□□□□ 0.19
SMAD5-210ENST00000515005 CXCL9Q07325 125 aa16.21■□□□□ 0.19
SMAD5-210ENST00000515005 CLEC4GQ6UXB4 293 aa16.21■□□□□ 0.19
SMAD5-210ENST00000515005 TRPM4Q8TD43 1214 aa16.21■□□□□ 0.19
SMAD5-210ENST00000515005 GBA2Q9HCG7 927 aaPredicted RBP16.2■□□□□ 0.18
SMAD5-210ENST00000515005 SHTN1A0MZ66 631 aa16.19■□□□□ 0.18
SMAD5-210ENST00000515005 PPIP5K2O43314 1243 aa16.19■□□□□ 0.18
SMAD5-210ENST00000515005 IL13P35225 146 aa16.19■□□□□ 0.18
SMAD5-210ENST00000515005 AOC3Q16853 763 aa16.19■□□□□ 0.18
SMAD5-210ENST00000515005 HDAC9Q9UKV0 1011 aa16.19■□□□□ 0.18
SMAD5-210ENST00000515005 NIP7Q9Y221 180 aaKnown RBP eCLIP16.19■□□□□ 0.18
SMAD5-210ENST00000515005 MTHFSDQ2M296 383 aaKnown RBP16.18■□□□□ 0.18
SMAD5-210ENST00000515005 CRY2Q49AN0 593 aa16.18■□□□□ 0.18
SMAD5-210ENST00000515005 ZNF790Q6PG37 636 aa16.18■□□□□ 0.18
SMAD5-210ENST00000515005 C2orf69Q8N8R5 385 aa16.18■□□□□ 0.18
SMAD5-210ENST00000515005 ZNF296Q8WUU4 475 aaPredicted RBP16.18■□□□□ 0.18
SMAD5-210ENST00000515005 SZT2Q5T011 3432 aa16.18■□□□□ 0.18
SMAD5-210ENST00000515005 KIAA0100Q14667 2235 aaKnown RBP16.17■□□□□ 0.18
SMAD5-210ENST00000515005 CEP290O15078 2479 aa16.17■□□□□ 0.18
SMAD5-210ENST00000515005 TCERG1O14776 1098 aaKnown RBP16.17■□□□□ 0.18
SMAD5-210ENST00000515005 SLC10A3P09131 477 aa16.17■□□□□ 0.18
SMAD5-210ENST00000515005 ZNRF3Q9ULT6 936 aa16.17■□□□□ 0.18
SMAD5-210ENST00000515005 ZNF652Q9Y2D9 606 aa16.17■□□□□ 0.18
SMAD5-210ENST00000515005 GRIPAP1Q4V328 841 aa16.16■□□□□ 0.18
SMAD5-210ENST00000515005 FBXO46Q6PJ61 603 aaPredicted RBP16.16■□□□□ 0.18
SMAD5-210ENST00000515005 BCL2L13Q9BXK5 485 aa16.16■□□□□ 0.18
SMAD5-210ENST00000515005 COLQQ9Y215 455 aaPredicted RBP16.16■□□□□ 0.18
SMAD5-210ENST00000515005 ABCC12Q96J65 1359 aa16.15■□□□□ 0.18
SMAD5-210ENST00000515005 GTF2E1P29083 439 aaPredicted RBP16.15■□□□□ 0.18
SMAD5-210ENST00000515005 CNOT7Q9UIV1 285 aaKnown RBP16.15■□□□□ 0.18
SMAD5-210ENST00000515005 CDHR2Q9BYE9 1310 aa16.15■□□□□ 0.18
SMAD5-210ENST00000515005 POTEFA5A3E0 1075 aa16.14■□□□□ 0.17
SMAD5-210ENST00000515005 RAD17O75943 681 aa16.14■□□□□ 0.17
SMAD5-210ENST00000515005 TBC1D8O95759 1140 aa16.14■□□□□ 0.17
SMAD5-210ENST00000515005 HMOX1P09601 288 aa16.14■□□□□ 0.17
SMAD5-210ENST00000515005 KRT26Q7Z3Y9 468 aa16.14■□□□□ 0.17
SMAD5-210ENST00000515005 SLC17A8Q8NDX2 589 aa16.14■□□□□ 0.17
SMAD5-210ENST00000515005 FMNL2Q96PY5 1086 aa16.14■□□□□ 0.17
SMAD5-210ENST00000515005 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
SMAD5-210ENST00000515005 A0A0C4DFX4 3053 aa16.13■□□□□ 0.17
SMAD5-210ENST00000515005 ADM5C9JUS6 153 aa16.13■□□□□ 0.17
SMAD5-210ENST00000515005 HOXA10P31260 410 aaPredicted RBP16.13■□□□□ 0.17
SMAD5-210ENST00000515005 NUTM1Q86Y26 1132 aa16.13■□□□□ 0.17
SMAD5-210ENST00000515005 RPGRQ92834 1020 aaKnown RBP16.13■□□□□ 0.17
SMAD5-210ENST00000515005 PPEF1O14829 653 aaPredicted RBP16.12■□□□□ 0.17
SMAD5-210ENST00000515005 KCNQ3O43525 872 aa16.12■□□□□ 0.17
SMAD5-210ENST00000515005 SAMD7Q7Z3H4 446 aa16.12■□□□□ 0.17
SMAD5-210ENST00000515005 REM2Q8IYK8 340 aaPredicted RBP16.12■□□□□ 0.17
SMAD5-210ENST00000515005 SIPA1L3O60292 1781 aaPredicted RBP16.12■□□□□ 0.17
SMAD5-210ENST00000515005 H7C1D1 291 aa16.11■□□□□ 0.17
SMAD5-210ENST00000515005 HLFQ16534 295 aa16.11■□□□□ 0.17
SMAD5-210ENST00000515005 RASAL3Q86YV0 1011 aa16.11■□□□□ 0.17
SMAD5-210ENST00000515005 MICALL2Q8IY33 904 aa16.11■□□□□ 0.17
SMAD5-210ENST00000515005 IL17REQ8NFR9 667 aa16.11■□□□□ 0.17
SMAD5-210ENST00000515005 VPS33BQ9H267 617 aa16.11■□□□□ 0.17
SMAD5-210ENST00000515005 PRAMEF22A3QJZ6 481 aa16.1■□□□□ 0.17
SMAD5-210ENST00000515005 TEFQ10587 303 aa16.1■□□□□ 0.17
SMAD5-210ENST00000515005 TNIP1Q15025 636 aa16.1■□□□□ 0.17
SMAD5-210ENST00000515005 CRAMP1Q96RY5 1269 aa16.1■□□□□ 0.17
SMAD5-210ENST00000515005 KIF7Q2M1P5 1343 aa16.1■□□□□ 0.17
SMAD5-210ENST00000515005 PAPPA2Q9BXP8 1791 aa16.09■□□□□ 0.17
SMAD5-210ENST00000515005 GPR25O00155 361 aa16.09■□□□□ 0.17
SMAD5-210ENST00000515005 EGFRP00533 1210 aa16.09■□□□□ 0.17
SMAD5-210ENST00000515005 RIC1Q4ADV7 1423 aa16.09■□□□□ 0.17
SMAD5-210ENST00000515005 NBPF26B4DH59 902 aa16.08■□□□□ 0.16
SMAD5-210ENST00000515005 RGL2O15211 777 aa16.08■□□□□ 0.16
SMAD5-210ENST00000515005 TBC1D10BQ4KMP7 808 aaPredicted RBP16.08■□□□□ 0.16
SMAD5-210ENST00000515005 NBPF10Q6P3W6 841 aaKnown RBP16.08■□□□□ 0.16
SMAD5-210ENST00000515005 RBM17Q96I25 401 aaKnown RBP16.08■□□□□ 0.16
SMAD5-210ENST00000515005 ZBTB12Q9Y330 459 aaPredicted RBP16.08■□□□□ 0.16
SMAD5-210ENST00000515005 HTTP42858 3142 aa16.08■□□□□ 0.16
SMAD5-210ENST00000515005 YDJCA8MPS7 323 aa16.07■□□□□ 0.16
SMAD5-210ENST00000515005 MORC1Q86VD1 984 aa16.07■□□□□ 0.16
SMAD5-210ENST00000515005 DCPSQ96C86 337 aaKnown RBP16.07■□□□□ 0.16
SMAD5-210ENST00000515005 RTFDC1Q9BY42 306 aaPredicted RBP16.07■□□□□ 0.16
SMAD5-210ENST00000515005 ATP6V0A2Q9Y487 856 aa16.07■□□□□ 0.16
SMAD5-210ENST00000515005 RBBP6Q7Z6E9 1792 aaKnown RBP16.06■□□□□ 0.16
SMAD5-210ENST00000515005 C3orf67Q6ZVT6 689 aa16.06■□□□□ 0.16
SMAD5-210ENST00000515005 SUPT20HQ8NEM7 779 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms