RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CDC45O75419 566 aa8.9□□□□□ -0.98
PDLIM5-219ENST00000514743 TSC1Q92574 1164 aa8.9□□□□□ -0.98
PDLIM5-219ENST00000514743 NBPF3Q9H094 633 aa8.9□□□□□ -0.98
PDLIM5-219ENST00000514743 MED4Q9NPJ6 270 aa8.9□□□□□ -0.98
PDLIM5-219ENST00000514743 CCT4P50991 539 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-219ENST00000514743 FLIIQ13045 1269 aa8.9□□□□□ -0.98
PDLIM5-219ENST00000514743 SPTY2D1Q68D10 685 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-219ENST00000514743 LTV1Q96GA3 475 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-219ENST00000514743 TSPAN18Q96SJ8 248 aa8.9□□□□□ -0.98
PDLIM5-219ENST00000514743 BABAM1Q9NWV8 329 aa8.9□□□□□ -0.98
PDLIM5-219ENST00000514743 SALL3Q9BXA9 1300 aa8.9□□□□□ -0.98
PDLIM5-219ENST00000514743 GOLGA6CA6NDK9 693 aa8.9□□□□□ -0.99
PDLIM5-219ENST00000514743 GOLGA6BA6NDN3 693 aa8.9□□□□□ -0.99
PDLIM5-219ENST00000514743 GOLGA6DP0CG33 693 aa8.9□□□□□ -0.99
PDLIM5-219ENST00000514743 U2AF2P26368 475 aaKnown RBP eCLIP8.9□□□□□ -0.992e-9■■■■■ 29.5
PDLIM5-219ENST00000514743 MYRIPQ8NFW9 859 aa8.9□□□□□ -0.99
PDLIM5-219ENST00000514743 GOLGA6AQ9NYA3 693 aa8.9□□□□□ -0.99
PDLIM5-219ENST00000514743 SLFN14P0C7P3 912 aa8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 HSCBQ8IWL3 235 aa8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 ARHGEF1Q92888 912 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 SOS1Q07889 1333 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 H0YHG0 523 aa8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 SARNPP82979 210 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 TAF7Q15545 349 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 SLC4A10Q6U841 1118 aa8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 FAM210AQ96ND0 272 aa8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 RBM42Q9BTD8 480 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 RPS6KL1Q9Y6S9 549 aa8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 SCN11AQ9UI33 1791 aa8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 C5P01031 1676 aa8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 PROCA1Q8NCQ7 364 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 ATL2Q8NHH9 583 aa8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 DRC1Q96MC2 740 aa8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 CHMP5Q9NZZ3 219 aa8.89□□□□□ -0.99
PDLIM5-219ENST00000514743 COL18A1P39060 1754 aa8.88□□□□□ -0.99
PDLIM5-219ENST00000514743 KLHL33A6NCF5 533 aa8.88□□□□□ -0.99
PDLIM5-219ENST00000514743 TRAK2O60296 914 aa8.88□□□□□ -0.99
PDLIM5-219ENST00000514743 SDSP20132 328 aa8.88□□□□□ -0.99
PDLIM5-219ENST00000514743 CCDC30Q5VVM6 783 aa8.88□□□□□ -0.99
PDLIM5-219ENST00000514743 JARID2Q92833 1246 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-219ENST00000514743 LMTK3Q96Q04 1460 aa8.88□□□□□ -0.99
PDLIM5-219ENST00000514743 TPM3P06753 285 aa8.88□□□□□ -0.99
PDLIM5-219ENST00000514743 LIG1P18858 919 aa8.88□□□□□ -0.99
PDLIM5-219ENST00000514743 JMYQ8N9B5 988 aa8.88□□□□□ -0.99
PDLIM5-219ENST00000514743 KDM4CQ9H3R0 1056 aa8.88□□□□□ -0.99
PDLIM5-219ENST00000514743 OSBPL3Q9H4L5 887 aa8.88□□□□□ -0.99
PDLIM5-219ENST00000514743 MST1RQ04912 1400 aa8.88□□□□□ -0.99
PDLIM5-219ENST00000514743 IPO7O95373 1038 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 RAD51AP2Q09MP3 1159 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 ESCO1Q5FWF5 840 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 C1QTNF12Q5T7M4 302 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 RPAINQ86UA6 219 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 STK31Q9BXU1 1019 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 NUCKS1Q9H1E3 243 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 PNMA6EA0A0J9YXQ4 647 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 MCM4P33991 863 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 LGR6Q9HBX8 967 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 OGFRQ9NZT2 677 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 MTMR7Q9Y216 660 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 DDX49Q9Y6V7 483 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 APBB1O00213 710 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 GNAI2P04899 355 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 PAX7P23759 505 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 FKBP5Q13451 457 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 SF3A1Q15459 793 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 LRRC59Q96AG4 307 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 PPP1R9BQ96SB3 815 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 ORAI2Q96SN7 254 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 FEZ1Q99689 392 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 USP26Q9BXU7 913 aa8.87□□□□□ -0.99
PDLIM5-219ENST00000514743 OVOS2A0A0G2JMS6 1433 aa8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 MYBPC2Q14324 1141 aa8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 CCDC91Q7Z6B0 441 aa8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 SUDS3Q9H7L9 328 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 PHAXQ9H814 394 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 IBTKQ9P2D0 1353 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 GOLGA6L6A8MZA4 724 aa8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 CTAGE5O15320 804 aa8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 EIF4A1P60842 406 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 ZRSR2Q15696 482 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 KCNH5Q8NCM2 988 aa8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 KIF3CO14782 793 aa8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 GYS2P54840 703 aa8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 PSME1Q06323 249 aa8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 SART3Q15020 963 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 DDX46Q7L014 1031 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 ARHGEF25Q86VW2 580 aa8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 USP44Q9H0E7 712 aa8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 EXOC6BQ9Y2D4 811 aa8.86□□□□□ -0.99
PDLIM5-219ENST00000514743 XIRP1Q702N8 1843 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-219ENST00000514743 K7ELQ4 463 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-219ENST00000514743 KCNQ3O43525 872 aa8.85□□□□□ -0.99
PDLIM5-219ENST00000514743 HMMRO75330 724 aa8.85□□□□□ -0.99
PDLIM5-219ENST00000514743 PDE1AP54750 535 aa8.85□□□□□ -0.99
PDLIM5-219ENST00000514743 C1orf167Q5SNV9 1468 aa8.85□□□□□ -0.99
PDLIM5-219ENST00000514743 ATP8B2P98198 1209 aa8.85□□□□□ -0.99
PDLIM5-219ENST00000514743 MSL3Q8N5Y2 521 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-219ENST00000514743 RNF25Q96BH1 459 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-219ENST00000514743 SETDB1Q15047 1291 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 TERF2Q15554 542 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms