RNA–Protein interactions for RNA: ENST00000514315.2

HMGCR-212, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-212ENST00000514315 TBC1D9BQ66K14 1250 aa9.66□□□□□ -0.86
HMGCR-212ENST00000514315 SULT6B1Q6IMI4 303 aa9.66□□□□□ -0.86
HMGCR-212ENST00000514315 BICDL1Q6ZP65 573 aa9.66□□□□□ -0.86
HMGCR-212ENST00000514315 ZNF622Q969S3 477 aaKnown RBP eCLIP9.66□□□□□ -0.86
HMGCR-212ENST00000514315 SLC52A2Q9HAB3 445 aa9.66□□□□□ -0.86
HMGCR-212ENST00000514315 COL15A1P39059 1388 aa9.65□□□□□ -0.86
HMGCR-212ENST00000514315 PDE4DIPQ5VU43 2346 aa9.65□□□□□ -0.86
HMGCR-212ENST00000514315 LTBP3Q9NS15 1303 aa9.65□□□□□ -0.86
HMGCR-212ENST00000514315 HSPA8P11142 646 aaKnown RBP9.65□□□□□ -0.86
HMGCR-212ENST00000514315 IL13P35225 146 aa9.65□□□□□ -0.86
HMGCR-212ENST00000514315 C1orf141Q5JVX7 400 aa9.65□□□□□ -0.86
HMGCR-212ENST00000514315 PRR5LQ6MZQ0 368 aa9.65□□□□□ -0.86
HMGCR-212ENST00000514315 BRIP1Q9BX63 1249 aa9.65□□□□□ -0.86
HMGCR-212ENST00000514315 TAF1DQ9H5J8 278 aaPredicted RBP9.65□□□□□ -0.86
HMGCR-212ENST00000514315 TRPM7Q96QT4 1865 aa9.64□□□□□ -0.87
HMGCR-212ENST00000514315 FAM205CA6NFA0 338 aa9.64□□□□□ -0.87
HMGCR-212ENST00000514315 TMEM88BA6NKF7 163 aa9.64□□□□□ -0.87
HMGCR-212ENST00000514315 RNMTO43148 476 aaKnown RBP9.64□□□□□ -0.87
HMGCR-212ENST00000514315 CANXP27824 592 aaKnown RBP9.64□□□□□ -0.87
HMGCR-212ENST00000514315 POLR2AP24928 1970 aaKnown RBP9.63□□□□□ -0.87
HMGCR-212ENST00000514315 RASSF10A6NK89 507 aa9.63□□□□□ -0.87
HMGCR-212ENST00000514315 SRGNP10124 158 aa9.63□□□□□ -0.87
HMGCR-212ENST00000514315 FMR1Q06787 632 aaKnown RBP eCLIP9.63□□□□□ -0.87
HMGCR-212ENST00000514315 DEFB115Q30KQ5 88 aa9.63□□□□□ -0.87
HMGCR-212ENST00000514315 AKAP4Q5JQC9 854 aa9.63□□□□□ -0.87
HMGCR-212ENST00000514315 LDHDQ86WU2 507 aa9.63□□□□□ -0.87
HMGCR-212ENST00000514315 VSIG10Q8N0Z9 540 aa9.63□□□□□ -0.87
HMGCR-212ENST00000514315 FBXO22Q8NEZ5 403 aa9.63□□□□□ -0.87
HMGCR-212ENST00000514315 TBC1D2BQ9UPU7 963 aa9.63□□□□□ -0.87
HMGCR-212ENST00000514315 HOXB1P14653 301 aaPredicted RBP9.62□□□□□ -0.87
HMGCR-212ENST00000514315 PDE6BP35913 854 aa9.62□□□□□ -0.87
HMGCR-212ENST00000514315 OLFM4Q6UX06 510 aa9.62□□□□□ -0.87
HMGCR-212ENST00000514315 HS3ST6Q96QI5 342 aa9.62□□□□□ -0.87
HMGCR-212ENST00000514315 TAOK3Q9H2K8 898 aa9.62□□□□□ -0.87
HMGCR-212ENST00000514315 SIPA1L3O60292 1781 aaPredicted RBP9.62□□□□□ -0.87
HMGCR-212ENST00000514315 WDR33Q9C0J8 1336 aaKnown RBP9.61□□□□□ -0.87
HMGCR-212ENST00000514315 MRC1P22897 1456 aa9.61□□□□□ -0.87
HMGCR-212ENST00000514315 MTHFSDQ2M296 383 aaKnown RBP9.61□□□□□ -0.87
HMGCR-212ENST00000514315 MAP1SQ66K74 1059 aaPredicted RBP9.61□□□□□ -0.87
HMGCR-212ENST00000514315 PRPF40BQ6NWY9 871 aaKnown RBP9.61□□□□□ -0.87
HMGCR-212ENST00000514315 TMEM92Q6UXU6 159 aa9.61□□□□□ -0.87
HMGCR-212ENST00000514315 CNTROBQ8N137 903 aa9.61□□□□□ -0.87
HMGCR-212ENST00000514315 MFRPQ9BY79 579 aa9.61□□□□□ -0.87
HMGCR-212ENST00000514315 PANK3Q9H999 370 aa9.61□□□□□ -0.87
HMGCR-212ENST00000514315 PDZRN3Q9UPQ7 1066 aa9.61□□□□□ -0.87
HMGCR-212ENST00000514315 LTBP1Q14766 1721 aa9.61□□□□□ -0.87
HMGCR-212ENST00000514315 ZNF541Q9H0D2 1346 aa9.6□□□□□ -0.87
HMGCR-212ENST00000514315 A1BGP04217 495 aa9.6□□□□□ -0.87
HMGCR-212ENST00000514315 STYK1Q6J9G0 422 aa9.6□□□□□ -0.87
HMGCR-212ENST00000514315 CNKSR1Q969H4 720 aa9.6□□□□□ -0.87
HMGCR-212ENST00000514315 AIDAQ96BJ3 306 aa9.6□□□□□ -0.87
HMGCR-212ENST00000514315 ZNF496Q96IT1 587 aaPredicted RBP9.6□□□□□ -0.87
HMGCR-212ENST00000514315 ZSWIM6Q9HCJ5 1215 aa9.6□□□□□ -0.87
HMGCR-212ENST00000514315 SCN7AQ01118 1682 aa9.59□□□□□ -0.87
HMGCR-212ENST00000514315 KLRG2A4D1S0 409 aaPredicted RBP9.59□□□□□ -0.87
HMGCR-212ENST00000514315 IQCA1LA6NCM1 817 aa9.59□□□□□ -0.87
HMGCR-212ENST00000514315 FZD9O00144 591 aa9.59□□□□□ -0.87
HMGCR-212ENST00000514315 CAMTA2O94983 1202 aa9.59□□□□□ -0.87
HMGCR-212ENST00000514315 EPHX2P34913 555 aa9.59□□□□□ -0.87
HMGCR-212ENST00000514315 MLLT1Q03111 559 aaPredicted RBP9.59□□□□□ -0.87
HMGCR-212ENST00000514315 EAPPQ56P03 285 aaPredicted RBP9.59□□□□□ -0.87
HMGCR-212ENST00000514315 CST9Q5W186 159 aa9.59□□□□□ -0.87
HMGCR-212ENST00000514315 IL17REQ8NFR9 667 aa9.59□□□□□ -0.87
HMGCR-212ENST00000514315 MASTLQ96GX5 879 aa9.59□□□□□ -0.87
HMGCR-212ENST00000514315 BCORQ6W2J9 1755 aa9.58□□□□□ -0.88
HMGCR-212ENST00000514315 CCDC85CA6NKD9 419 aa9.58□□□□□ -0.88
HMGCR-212ENST00000514315 HMOX1P09601 288 aa9.58□□□□□ -0.88
HMGCR-212ENST00000514315 MAP2K1Q02750 393 aaPredicted RBP9.58□□□□□ -0.88
HMGCR-212ENST00000514315 ZNF277Q9NRM2 450 aaPredicted RBP9.58□□□□□ -0.88
HMGCR-212ENST00000514315 HACL1Q9UJ83 578 aa9.58□□□□□ -0.88
HMGCR-212ENST00000514315 COL4A5P29400 1685 aa9.58□□□□□ -0.88
HMGCR-212ENST00000514315 THSD7BQ9C0I4 1608 aa9.57□□□□□ -0.88
HMGCR-212ENST00000514315 A0A087WZG4 1122 aa9.57□□□□□ -0.88
HMGCR-212ENST00000514315 KCNQ3O43525 872 aa9.57□□□□□ -0.88
HMGCR-212ENST00000514315 STARD3NLO95772 234 aa9.57□□□□□ -0.88
HMGCR-212ENST00000514315 IL6STP40189 918 aaPredicted RBP9.57□□□□□ -0.88
HMGCR-212ENST00000514315 SETDB2Q96T68 719 aa9.57□□□□□ -0.88
HMGCR-212ENST00000514315 DDX21Q9NR30 783 aaKnown RBP eCLIP9.57□□□□□ -0.88
HMGCR-212ENST00000514315 USP16Q9Y5T5 823 aa9.57□□□□□ -0.88
HMGCR-212ENST00000514315 RNF123Q5XPI4 1314 aa9.56□□□□□ -0.88
HMGCR-212ENST00000514315 SNED1Q8TER0 1413 aa9.56□□□□□ -0.88
HMGCR-212ENST00000514315 HEG1Q9ULI3 1381 aa9.56□□□□□ -0.88
HMGCR-212ENST00000514315 POTEB3A0JP26 581 aa9.56□□□□□ -0.88
HMGCR-212ENST00000514315 FKBP4Q02790 459 aaKnown RBP eCLIP9.56□□□□□ -0.88
HMGCR-212ENST00000514315 CYP4F22Q6NT55 531 aa9.56□□□□□ -0.88
HMGCR-212ENST00000514315 ZNF790Q6PG37 636 aa9.56□□□□□ -0.88
HMGCR-212ENST00000514315 POTEBQ6S5H4 581 aa9.56□□□□□ -0.88
HMGCR-212ENST00000514315 MORC1Q86VD1 984 aa9.56□□□□□ -0.88
HMGCR-212ENST00000514315 POLR3GLQ9BT43 218 aa9.56□□□□□ -0.88
HMGCR-212ENST00000514315 KRTAP3-3Q9BYR6 98 aa9.56□□□□□ -0.88
HMGCR-212ENST00000514315 KRTAP3-2Q9BYR7 98 aa9.56□□□□□ -0.88
HMGCR-212ENST00000514315 TSKSQ9UJT2 592 aa9.56□□□□□ -0.88
HMGCR-212ENST00000514315 NUP98P52948 1817 aa9.56□□□□□ -0.88
HMGCR-212ENST00000514315 PIP4K2AP48426 406 aaPredicted RBP9.55□□□□□ -0.88
HMGCR-212ENST00000514315 SOGA3Q5TF21 947 aa9.55□□□□□ -0.88
HMGCR-212ENST00000514315 PNMA8AQ86V59 439 aaPredicted RBP9.55□□□□□ -0.88
HMGCR-212ENST00000514315 SYNE4Q8N205 404 aa9.55□□□□□ -0.88
HMGCR-212ENST00000514315 CNBD1Q8NA66 436 aa9.55□□□□□ -0.88
HMGCR-212ENST00000514315 CAPNS2Q96L46 248 aa9.55□□□□□ -0.88
HMGCR-212ENST00000514315 GPR101Q96P66 508 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms