RNA–Protein interactions for RNA: ENST00000513800.5

DCUN1D4-222, Transcript of defective in cullin neddylation 1 domain containing 4, human

TSL 2

Gene DCUN1D4, Length 949 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCUN1D4-222	ENST00000513800	ANKRD13D	Q6ZTN6	518 aa		32.51	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	IL16	Q14005	1332 aa		32.51	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	CACNA1S	Q13698	1873 aa		32.49	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	NLRP3	Q96P20	1036 aa		32.49	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	ELL2	O00472	640 aa	Predicted RBP	32.48	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	KIF3C	O14782	793 aa		32.48	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	NLRP10	Q86W26	655 aa		32.48	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	FER1L6	Q2WGJ9	1857 aa		32.48	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	ANKRD36C	Q5JPF3	1778 aa		32.47	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.47	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	CCDC30	Q5VVM6	783 aa		32.47	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	C7orf43	Q8WVR3	580 aa		32.47	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	RBM17	Q96I25	401 aa	Known RBP	32.47	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	HOXA10	P31260	410 aa	Predicted RBP	32.46	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	GOLGA2	Q08379	1002 aa		32.46	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	RTKN2	Q8IZC4	609 aa		32.46	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	SENP3-EIF4A1	A0A087X0R7	540 aa		32.45	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	C8orf58	Q8NAV2	365 aa		32.45	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	TRMT112	Q9UI30	125 aa	Known RBP	32.45	■■■□□ 2.79
DCUN1D4-222	ENST00000513800	PRELP	P51888	382 aa		32.44	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	SLC10A5	Q5PT55	438 aa		32.44	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	CC2D2B	Q6DHV5	1058 aa		32.44	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.44	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	NMRK2	Q9NPI5	230 aa		32.44	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	DPY19L2	Q6NUT2	758 aa		32.43	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	CRAMP1	Q96RY5	1269 aa		32.43	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	SH3TC1	Q8TE82	1336 aa		32.43	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	GLTPD2	A6NH11	291 aa		32.42	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	FAM9B	Q8IZU0	186 aa		32.42	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	TSR2	Q969E8	191 aa	Known RBP	32.42	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	TIAM2	Q8IVF5	1701 aa		32.41	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	TOMM70	O94826	608 aa		32.41	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.41	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	GRIPAP1	Q4V328	841 aa		32.41	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	RIC3	Q7Z5B4	369 aa		32.41	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	WDR63	Q8IWG1	891 aa		32.41	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	TMX4	Q9H1E5	349 aa	Predicted RBP	32.41	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	DDX58	O95786	925 aa	Known RBP	32.4	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	CCDC88A	Q3V6T2	1871 aa		32.4	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	STK31	Q9BXU1	1019 aa		32.39	■■■□□ 2.78
DCUN1D4-222	ENST00000513800	ISCA1	Q9BUE6	129 aa		32.38	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	TRIM28	Q13263	835 aa	Known RBP	32.37	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	SALL2	Q9Y467	1007 aa	Predicted RBP	32.37	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	DICER1	Q9UPY3	1922 aa	Known RBP	32.36	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	TWISTNB	Q3B726	338 aa	Predicted RBP	32.36	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	TSPYL6	Q8N831	410 aa		32.36	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	PHAX	Q9H814	394 aa	Known RBP	32.36	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	RRAGC	Q9HB90	399 aa		32.36	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	PPEF1	O14829	653 aa	Predicted RBP	32.35	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	ATP5J2-PTCD1	G3V325	749 aa		32.34	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	HCLS1	P14317	486 aa	Predicted RBP	32.34	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	C3orf67	Q6ZVT6	689 aa		32.34	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	PSMD1	Q99460	953 aa		32.34	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	HSP90B1	P14625	803 aa	Known RBP	32.33	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	RBM46	Q8TBY0	533 aa	Known RBP	32.33	■■■□□ 2.77
DCUN1D4-222	ENST00000513800	FANCI	Q9NVI1	1328 aa		32.32	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	VEGFA	P15692	232 aa	Predicted RBP	32.32	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	OLFM4	Q6UX06	510 aa		32.32	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	DDX46	Q7L014	1031 aa	Known RBP	32.32	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	SYNE4	Q8N205	404 aa		32.31	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.31	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	BBOX1	O75936	387 aa		32.3	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	HSPA6	P17066	643 aa		32.3	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	ABCC4	O15439	1325 aa		32.29	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	IARS	P41252	1262 aa	Known RBP	32.29	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	FAM89A	Q96GI7	184 aa		32.29	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	MYH16	Q9H6N6	1097 aa		32.29	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	CCDC191	Q8NCU4	936 aa		32.28	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	MYD88	Q99836	296 aa		32.28	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	JDP2	Q8WYK2	163 aa		32.27	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	METTL22	Q9BUU2	404 aa	Predicted RBP	32.27	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	ATP6V0A2	Q9Y487	856 aa		32.27	■■■□□ 2.76
DCUN1D4-222	ENST00000513800	TCERG1	O14776	1098 aa	Known RBP	32.26	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	FSTL1	Q12841	308 aa		32.26	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	TMC4	Q7Z404	712 aa		32.26	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.26	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	SNED1	Q8TER0	1413 aa		32.26	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	NEXN	Q0ZGT2	675 aa		32.25	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	GRAP	Q13588	217 aa		32.25	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	KSR2	Q6VAB6	950 aa		32.25	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	GRAPL	Q8TC17	118 aa	Predicted RBP	32.25	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	CWC25	Q9NXE8	425 aa	Predicted RBP	32.25	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	IRS4	O14654	1257 aa	Predicted RBP	32.24	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	SLC4A2	P04920	1241 aa		32.24	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	MAP3K2	Q9Y2U5	619 aa		32.24	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	WDR90	Q96KV7	1748 aa		32.23	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	LAMB2	P55268	1798 aa		32.23	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	SF3B3	Q15393	1217 aa	Known RBP	32.23	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	ZNF428	Q96B54	188 aa		32.23	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	PI4KAP2	A4QPH2	592 aa		32.22	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	RTL5	Q5HYW3	569 aa	Predicted RBP	32.22	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	SP8	Q8IXZ3	490 aa		32.22	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	PI4KAP1	Q8N8J0	262 aa		32.22	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	SMC1B	Q8NDV3	1235 aa		32.22	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	SUPT20H	Q8NEM7	779 aa		32.22	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	VPS33B	Q9H267	617 aa		32.21	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	IQCA1L	A6NCM1	817 aa		32.2	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	DDN	O94850	711 aa	Predicted RBP	32.2	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	PCCA	P05165	728 aa	Predicted RBP	32.2	■■■□□ 2.75
DCUN1D4-222	ENST00000513800	EXOSC9	Q06265	439 aa	Known RBP	32.2	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms