RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 PTGDRQ13258 359 aa7.97□□□□□ -1.13
GYPB-213ENST00000513128 NFIXQ14938 502 aa7.97□□□□□ -1.13
GYPB-213ENST00000513128 DALRD3Q5D0E6 543 aaKnown RBP7.97□□□□□ -1.13
GYPB-213ENST00000513128 CC2D1BQ5T0F9 858 aaKnown RBP7.97□□□□□ -1.13
GYPB-213ENST00000513128 DNAJC5GQ8N7S2 189 aa7.97□□□□□ -1.13
GYPB-213ENST00000513128 CCER1Q8TC90 406 aaPredicted RBP7.97□□□□□ -1.13
GYPB-213ENST00000513128 DDX12PQ92771 950 aa7.97□□□□□ -1.13
GYPB-213ENST00000513128 PLSCR2Q9NRY7 297 aa7.97□□□□□ -1.13
GYPB-213ENST00000513128 MTMR7Q9Y216 660 aa7.97□□□□□ -1.13
GYPB-213ENST00000513128 ZBTB1Q9Y2K1 713 aa7.97□□□□□ -1.13
GYPB-213ENST00000513128 COL3A1P02461 1466 aaPredicted RBP7.97□□□□□ -1.13
GYPB-213ENST00000513128 ANKRD31Q8N7Z5 1873 aa7.97□□□□□ -1.13
GYPB-213ENST00000513128 CARMIL3Q8ND23 1372 aa7.97□□□□□ -1.13
GYPB-213ENST00000513128 MAP3K9P80192 1104 aa7.96□□□□□ -1.14
GYPB-213ENST00000513128 HTRA3P83110 453 aa7.96□□□□□ -1.14
GYPB-213ENST00000513128 MICALL2Q8IY33 904 aa7.96□□□□□ -1.14
GYPB-213ENST00000513128 TMC2Q8TDI7 906 aa7.96□□□□□ -1.14
GYPB-213ENST00000513128 COG6Q9Y2V7 657 aa7.96□□□□□ -1.14
GYPB-213ENST00000513128 COL15A1P39059 1388 aa7.96□□□□□ -1.14
GYPB-213ENST00000513128 TNRC6CQ9HCJ0 1690 aaKnown RBP7.95□□□□□ -1.14
GYPB-213ENST00000513128 COL11A2P13942 1736 aaPredicted RBP7.95□□□□□ -1.14
GYPB-213ENST00000513128 DIAPH1O60610 1272 aaKnown RBP7.95□□□□□ -1.14
GYPB-213ENST00000513128 RASSF7Q02833 373 aa7.95□□□□□ -1.14
GYPB-213ENST00000513128 CNGB1Q14028 1251 aaPredicted RBP7.95□□□□□ -1.14
GYPB-213ENST00000513128 SKIV2LQ15477 1246 aaKnown RBP7.95□□□□□ -1.14
GYPB-213ENST00000513128 IL17REQ8NFR9 667 aa7.95□□□□□ -1.14
GYPB-213ENST00000513128 RNF181Q9P0P0 153 aa7.95□□□□□ -1.14
GYPB-213ENST00000513128 NARFQ9UHQ1 456 aa7.95□□□□□ -1.14
GYPB-213ENST00000513128 SCN7AQ01118 1682 aa7.95□□□□□ -1.14
GYPB-213ENST00000513128 TIAM2Q8IVF5 1701 aa7.95□□□□□ -1.14
GYPB-213ENST00000513128 CACNA1SQ13698 1873 aa7.94□□□□□ -1.14
GYPB-213ENST00000513128 ZPR1O75312 459 aa7.94□□□□□ -1.14
GYPB-213ENST00000513128 CANXP27824 592 aaKnown RBP7.94□□□□□ -1.14
GYPB-213ENST00000513128 FXR2P51116 673 aaKnown RBP eCLIP7.94□□□□□ -1.14
GYPB-213ENST00000513128 APLP1P51693 650 aa7.94□□□□□ -1.14
GYPB-213ENST00000513128 ZNF428Q96B54 188 aa7.94□□□□□ -1.14
GYPB-213ENST00000513128 ZNF496Q96IT1 587 aaPredicted RBP7.94□□□□□ -1.14
GYPB-213ENST00000513128 PHOX2BQ99453 314 aa7.94□□□□□ -1.14
GYPB-213ENST00000513128 GZF1Q9H116 711 aaPredicted RBP7.94□□□□□ -1.14
GYPB-213ENST00000513128 RRAGCQ9HB90 399 aa7.94□□□□□ -1.14
GYPB-213ENST00000513128 C2orf72A6NCS6 295 aa7.93□□□□□ -1.14
GYPB-213ENST00000513128 SERPINB2P05120 415 aa7.93□□□□□ -1.14
GYPB-213ENST00000513128 EIF5P55010 431 aaKnown RBP7.93□□□□□ -1.14
GYPB-213ENST00000513128 FOXD4L5Q5VV16 416 aaPredicted RBP7.93□□□□□ -1.14
GYPB-213ENST00000513128 BICDL1Q6ZP65 573 aa7.93□□□□□ -1.14
GYPB-213ENST00000513128 CCDC24Q8N4L8 307 aa7.93□□□□□ -1.14
GYPB-213ENST00000513128 RBM46Q8TBY0 533 aaKnown RBP7.93□□□□□ -1.14
GYPB-213ENST00000513128 FOXD4L4Q8WXT5 416 aaPredicted RBP7.93□□□□□ -1.14
GYPB-213ENST00000513128 BCORQ6W2J9 1755 aa7.92□□□□□ -1.14
GYPB-213ENST00000513128 FER1L6Q2WGJ9 1857 aa7.92□□□□□ -1.14
GYPB-213ENST00000513128 NFKBIEO00221 500 aa7.92□□□□□ -1.14
GYPB-213ENST00000513128 U2SURPO15042 1029 aaKnown RBP7.92□□□□□ -1.14
GYPB-213ENST00000513128 KCNQ3O43525 872 aa7.92□□□□□ -1.14
GYPB-213ENST00000513128 MFAP1P55081 439 aaKnown RBP7.92□□□□□ -1.14
GYPB-213ENST00000513128 MDM2Q00987 491 aaPredicted RBP7.92□□□□□ -1.14
GYPB-213ENST00000513128 TMCO4Q5TGY1 634 aa7.92□□□□□ -1.14
GYPB-213ENST00000513128 TBC1D9BQ66K14 1250 aa7.92□□□□□ -1.14
GYPB-213ENST00000513128 C2CD5Q86YS7 1000 aa7.92□□□□□ -1.14
GYPB-213ENST00000513128 MS4A3Q96HJ5 214 aa7.92□□□□□ -1.14
GYPB-213ENST00000513128 PHACTR3Q96KR7 559 aa7.92□□□□□ -1.14
GYPB-213ENST00000513128 SNRKQ9NRH2 765 aa7.92□□□□□ -1.14
GYPB-213ENST00000513128 POLR3EQ9NVU0 708 aa7.92□□□□□ -1.14
GYPB-213ENST00000513128 DICER1Q9UPY3 1922 aaKnown RBP7.91□□□□□ -1.14
GYPB-213ENST00000513128 A1BGP04217 495 aa7.91□□□□□ -1.14
GYPB-213ENST00000513128 SSTR3P32745 418 aaPredicted RBP7.91□□□□□ -1.14
GYPB-213ENST00000513128 ZNF790Q6PG37 636 aa7.91□□□□□ -1.14
GYPB-213ENST00000513128 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.91□□□□□ -1.14
GYPB-213ENST00000513128 TBC1D2BQ9UPU7 963 aa7.91□□□□□ -1.14
GYPB-213ENST00000513128 KDM2BQ8NHM5 1336 aa7.91□□□□□ -1.14
GYPB-213ENST00000513128 HEG1Q9ULI3 1381 aa7.91□□□□□ -1.14
GYPB-213ENST00000513128 SLX4Q8IY92 1834 aa7.91□□□□□ -1.14
GYPB-213ENST00000513128 CEMIPQ8WUJ3 1361 aa7.9□□□□□ -1.14
GYPB-213ENST00000513128 NPC1L1Q9UHC9 1359 aa7.9□□□□□ -1.14
GYPB-213ENST00000513128 PRAMEF22A3QJZ6 481 aa7.9□□□□□ -1.14
GYPB-213ENST00000513128 SPDYE5A6NIY4 337 aa7.9□□□□□ -1.14
GYPB-213ENST00000513128 GNAT3A8MTJ3 354 aa7.9□□□□□ -1.14
GYPB-213ENST00000513128 POTECB2RU33 542 aa7.9□□□□□ -1.14
GYPB-213ENST00000513128 STARD3NLO95772 234 aa7.9□□□□□ -1.14
GYPB-213ENST00000513128 PIP4K2AP48426 406 aaPredicted RBP7.9□□□□□ -1.14
GYPB-213ENST00000513128 PRR5LQ6MZQ0 368 aa7.9□□□□□ -1.14
GYPB-213ENST00000513128 C16orf71Q8IYS4 520 aaPredicted RBP7.9□□□□□ -1.14
GYPB-213ENST00000513128 TTC5Q8N0Z6 440 aa7.9□□□□□ -1.14
GYPB-213ENST00000513128 TTLL6Q8N841 843 aa7.9□□□□□ -1.14
GYPB-213ENST00000513128 CDHR5Q9HBB8 845 aa7.9□□□□□ -1.14
GYPB-213ENST00000513128 GPCPD1Q9NPB8 672 aa7.9□□□□□ -1.14
GYPB-213ENST00000513128 ZNF330Q9Y3S2 320 aaPredicted RBP7.9□□□□□ -1.14
GYPB-213ENST00000513128 ARFGEF2Q9Y6D5 1785 aa7.89□□□□□ -1.15
GYPB-213ENST00000513128 GLTPD2A6NH11 291 aa7.89□□□□□ -1.15
GYPB-213ENST00000513128 H0YIN7 160 aa7.89□□□□□ -1.15
GYPB-213ENST00000513128 CAMTA2O94983 1202 aa7.89□□□□□ -1.15
GYPB-213ENST00000513128 LMNB1P20700 586 aa7.89□□□□□ -1.15
GYPB-213ENST00000513128 CLCN1P35523 988 aa7.89□□□□□ -1.15
GYPB-213ENST00000513128 TEFQ10587 303 aa7.89□□□□□ -1.15
GYPB-213ENST00000513128 FSTL1Q12841 308 aa7.89□□□□□ -1.15
GYPB-213ENST00000513128 KLRG1Q96E93 195 aa7.89□□□□□ -1.15
GYPB-213ENST00000513128 BEGAINQ9BUH8 593 aa7.89□□□□□ -1.15
GYPB-213ENST00000513128 USP16Q9Y5T5 823 aa7.89□□□□□ -1.15
GYPB-213ENST00000513128 TTLL13PA6NNM8 815 aa7.88□□□□□ -1.15
GYPB-213ENST00000513128 C21orf2O43822 256 aa7.88□□□□□ -1.15
GYPB-213ENST00000513128 IGSF3O75054 1194 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms