RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 VTI1AQ96AJ9 217 aa10.49□□□□□ -0.73
RFC1-213ENST00000512275 BCL2L13Q9BXK5 485 aa10.49□□□□□ -0.73
RFC1-213ENST00000512275 FHDC1Q9C0D6 1143 aaPredicted RBP10.49□□□□□ -0.73
RFC1-213ENST00000512275 FGD6Q6ZV73 1430 aa10.49□□□□□ -0.73
RFC1-213ENST00000512275 WIPF1O43516 503 aa10.48□□□□□ -0.73
RFC1-213ENST00000512275 HIRAP54198 1017 aaPredicted RBP10.48□□□□□ -0.73
RFC1-213ENST00000512275 CBLBQ13191 982 aa10.48□□□□□ -0.73
RFC1-213ENST00000512275 TLR1Q15399 786 aa10.48□□□□□ -0.73
RFC1-213ENST00000512275 FBXO33Q7Z6M2 555 aa10.48□□□□□ -0.73
RFC1-213ENST00000512275 QTRT2Q9H974 415 aaKnown RBP10.48□□□□□ -0.73
RFC1-213ENST00000512275 CCNB3Q8WWL7 1395 aa10.48□□□□□ -0.73
RFC1-213ENST00000512275 MPSTP25325 297 aa10.47□□□□□ -0.73
RFC1-213ENST00000512275 COX20Q5RI15 118 aa10.47□□□□□ -0.73
RFC1-213ENST00000512275 RGL4Q8IZJ4 473 aa10.47□□□□□ -0.73
RFC1-213ENST00000512275 MYO19Q96H55 970 aa10.47□□□□□ -0.73
RFC1-213ENST00000512275 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.47□□□□□ -0.731e-7■■■■■ 115.4
RFC1-213ENST00000512275 KIAA1522Q9P206 1035 aaPredicted RBP10.47□□□□□ -0.73
RFC1-213ENST00000512275 MAPKBP1O60336 1514 aa10.47□□□□□ -0.73
RFC1-213ENST00000512275 TIMP2P16035 220 aa10.46□□□□□ -0.73
RFC1-213ENST00000512275 COL19A1Q14993 1142 aa10.46□□□□□ -0.73
RFC1-213ENST00000512275 ITPKCQ96DU7 683 aa10.46□□□□□ -0.73
RFC1-213ENST00000512275 ZFP42Q96MM3 310 aa10.46□□□□□ -0.73
RFC1-213ENST00000512275 GPATCH8Q9UKJ3 1502 aaKnown RBP10.46□□□□□ -0.74
RFC1-213ENST00000512275 ABCA9Q8IUA7 1624 aa10.46□□□□□ -0.74
RFC1-213ENST00000512275 EML1O00423 815 aa10.45□□□□□ -0.74
RFC1-213ENST00000512275 PTGIRP43119 386 aa10.45□□□□□ -0.74
RFC1-213ENST00000512275 WDR4P57081 412 aaKnown RBP10.45□□□□□ -0.74
RFC1-213ENST00000512275 TEAD4Q15561 434 aa10.45□□□□□ -0.74
RFC1-213ENST00000512275 ZSCAN29Q8IWY8 852 aaPredicted RBP10.45□□□□□ -0.74
RFC1-213ENST00000512275 NBPF15Q8N660 670 aa10.45□□□□□ -0.74
RFC1-213ENST00000512275 GIPC2Q8TF65 315 aa10.45□□□□□ -0.74
RFC1-213ENST00000512275 ZDHHC1Q8WTX9 485 aa10.45□□□□□ -0.74
RFC1-213ENST00000512275 RBCK1Q9BYM8 510 aa10.45□□□□□ -0.74
RFC1-213ENST00000512275 IGSF5Q9NSI5 407 aa10.45□□□□□ -0.74
RFC1-213ENST00000512275 FAM50AQ14320 339 aaKnown RBP10.44□□□□□ -0.74
RFC1-213ENST00000512275 NXF1Q9UBU9 619 aaKnown RBP10.44□□□□□ -0.74
RFC1-213ENST00000512275 LRFN2Q9ULH4 789 aa10.44□□□□□ -0.74
RFC1-213ENST00000512275 ARHGAP5Q13017 1502 aa10.43□□□□□ -0.74
RFC1-213ENST00000512275 CAMSAP2Q08AD1 1489 aa10.43□□□□□ -0.74
RFC1-213ENST00000512275 TCOF1Q13428 1488 aaKnown RBP10.43□□□□□ -0.74
RFC1-213ENST00000512275 ZIC2O95409 532 aaPredicted RBP10.43□□□□□ -0.74
RFC1-213ENST00000512275 CENPCQ03188 943 aa10.43□□□□□ -0.74
RFC1-213ENST00000512275 MRPL14Q6P1L8 145 aaKnown RBP10.43□□□□□ -0.74
RFC1-213ENST00000512275 ZFAND3Q9H8U3 227 aa10.43□□□□□ -0.74
RFC1-213ENST00000512275 STIM2Q9P246 746 aa10.43□□□□□ -0.74
RFC1-213ENST00000512275 SAMD9LQ8IVG5 1584 aa10.43□□□□□ -0.74
RFC1-213ENST00000512275 MIA2Q96PC5 1412 aa10.42□□□□□ -0.74
RFC1-213ENST00000512275 KIF13AQ9H1H9 1805 aa10.42□□□□□ -0.74
RFC1-213ENST00000512275 CROCC2H7BZ55 1655 aa10.42□□□□□ -0.74
RFC1-213ENST00000512275 EIF1AXP47813 144 aaKnown RBP10.42□□□□□ -0.74
RFC1-213ENST00000512275 SH3PXD2AQ5TCZ1 1133 aa10.42□□□□□ -0.74
RFC1-213ENST00000512275 MRRFQ96E11 262 aaKnown RBP10.42□□□□□ -0.74
RFC1-213ENST00000512275 AGBL1Q96MI9 1066 aa10.42□□□□□ -0.74
RFC1-213ENST00000512275 DIP2BQ9P265 1576 aa10.42□□□□□ -0.74
RFC1-213ENST00000512275 DNMT1P26358 1616 aaKnown RBP10.41□□□□□ -0.74
RFC1-213ENST00000512275 TSPOAP1O95153 1857 aa10.41□□□□□ -0.74
RFC1-213ENST00000512275 SERTM1A2A2V5 107 aa10.41□□□□□ -0.74
RFC1-213ENST00000512275 FZD6O60353 706 aa10.41□□□□□ -0.74
RFC1-213ENST00000512275 ITGAEP38570 1179 aa10.41□□□□□ -0.74
RFC1-213ENST00000512275 INSM1Q01101 510 aaPredicted RBP10.41□□□□□ -0.74
RFC1-213ENST00000512275 TMC7Q7Z402 723 aa10.41□□□□□ -0.74
RFC1-213ENST00000512275 SLC16A10Q8TF71 515 aa10.41□□□□□ -0.74
RFC1-213ENST00000512275 CHMP3Q9Y3E7 222 aa10.41□□□□□ -0.74
RFC1-213ENST00000512275 MAP3K4Q9Y6R4 1608 aa10.4□□□□□ -0.74
RFC1-213ENST00000512275 NOS2P35228 1153 aa10.4□□□□□ -0.74
RFC1-213ENST00000512275 SCARF1Q14162 830 aa10.4□□□□□ -0.74
RFC1-213ENST00000512275 FAM26DQ5JW98 314 aa10.4□□□□□ -0.74
RFC1-213ENST00000512275 ZNF644Q9H582 1327 aaPredicted RBP10.39□□□□□ -0.75
RFC1-213ENST00000512275 ADGBQ8N7X0 1667 aa10.39□□□□□ -0.75
RFC1-213ENST00000512275 NDUFB5O43674 189 aa10.39□□□□□ -0.75
RFC1-213ENST00000512275 IGHA2P01877 340 aa10.39□□□□□ -0.75
RFC1-213ENST00000512275 ZNF326Q5BKZ1 582 aaKnown RBP10.39□□□□□ -0.75
RFC1-213ENST00000512275 ALKBH2Q6NS38 261 aa10.39□□□□□ -0.75
RFC1-213ENST00000512275 CITED4Q96RK1 184 aa10.39□□□□□ -0.75
RFC1-213ENST00000512275 CFDP1Q9UEE9 299 aaPredicted RBP10.39□□□□□ -0.75
RFC1-213ENST00000512275 SYCP2Q9BX26 1530 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 MEN1O00255 615 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 VAMP1P23763 118 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 RELBQ01201 579 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 TAGLNQ01995 201 aaKnown RBP10.38□□□□□ -0.75
RFC1-213ENST00000512275 RTN1Q16799 776 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 NPAS3Q8IXF0 933 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 ALDH16A1Q8IZ83 802 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 MEIOBQ8N635 442 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 ABTB2Q8N961 1025 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 L3MBTL2Q969R5 705 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 NLRP3Q96P20 1036 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 STK17AQ9UEE5 414 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 BRPF3Q9ULD4 1205 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 GLI2P10070 1586 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.38□□□□□ -0.75
RFC1-213ENST00000512275 ARAP3Q8WWN8 1544 aa10.38□□□□□ -0.75
RFC1-213ENST00000512275 ZBTB39O15060 712 aa10.37□□□□□ -0.75
RFC1-213ENST00000512275 TREHO43280 583 aa10.37□□□□□ -0.75
RFC1-213ENST00000512275 PLCH2O75038 1416 aa10.37□□□□□ -0.75
RFC1-213ENST00000512275 VEGFBP49765 207 aa10.37□□□□□ -0.75
RFC1-213ENST00000512275 FMR1Q06787 632 aaKnown RBP eCLIP10.37□□□□□ -0.75
RFC1-213ENST00000512275 CFAP74Q9C0B2 1584 aa10.37□□□□□ -0.75
RFC1-213ENST00000512275 CCDC87Q9NVE4 849 aa10.37□□□□□ -0.75
RFC1-213ENST00000512275 ABCC1P33527 1531 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 270.3 ms