RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 TRPM3Q9HCF6 1732 aaPredicted RBP5.73□□□□□ -1.49
MATR3-219ENST00000512040 NWD2Q9ULI1 1742 aa5.73□□□□□ -1.49
MATR3-219ENST00000512040 WIPF1O43516 503 aa5.72□□□□□ -1.49
MATR3-219ENST00000512040 AP1G2O75843 785 aa5.72□□□□□ -1.49
MATR3-219ENST00000512040 LIG1P18858 919 aa5.72□□□□□ -1.49
MATR3-219ENST00000512040 KRBA2Q6ZNG9 492 aa5.72□□□□□ -1.49
MATR3-219ENST00000512040 PPARGC1BQ86YN6 1023 aaKnown RBP5.72□□□□□ -1.49
MATR3-219ENST00000512040 FNBP4Q8N3X1 1017 aaPredicted RBP5.72□□□□□ -1.49
MATR3-219ENST00000512040 ZNF516Q92618 1163 aa5.72□□□□□ -1.49
MATR3-219ENST00000512040 ANP32BQ92688 251 aaKnown RBP5.72□□□□□ -1.49
MATR3-219ENST00000512040 MKL1Q969V6 931 aa5.72□□□□□ -1.49
MATR3-219ENST00000512040 CLUAP1Q96AJ1 413 aa5.72□□□□□ -1.49
MATR3-219ENST00000512040 KIF1AQ12756 1690 aa5.72□□□□□ -1.49
MATR3-219ENST00000512040 PLEKHH1Q9ULM0 1364 aa5.71□□□□□ -1.5
MATR3-219ENST00000512040 CFAP99D6REC4 459 aa5.71□□□□□ -1.5
MATR3-219ENST00000512040 NRDCO43847 1150 aa5.71□□□□□ -1.5
MATR3-219ENST00000512040 ZPR1O75312 459 aa5.71□□□□□ -1.5
MATR3-219ENST00000512040 EIF3JO75822 258 aaKnown RBP5.71□□□□□ -1.5
MATR3-219ENST00000512040 FMNL1O95466 1100 aaPredicted RBP5.71□□□□□ -1.5
MATR3-219ENST00000512040 TJAP1Q5JTD0 557 aa5.71□□□□□ -1.5
MATR3-219ENST00000512040 BRICD5Q6PL45 260 aa5.71□□□□□ -1.5
MATR3-219ENST00000512040 PRR7Q8TB68 274 aa5.71□□□□□ -1.5
MATR3-219ENST00000512040 UBXN4Q92575 508 aa5.71□□□□□ -1.5
MATR3-219ENST00000512040 IL21Q9HBE4 155 aa5.71□□□□□ -1.5
MATR3-219ENST00000512040 ALS2Q96Q42 1657 aa5.71□□□□□ -1.5
MATR3-219ENST00000512040 THSD7AQ9UPZ6 1657 aa5.71□□□□□ -1.5
MATR3-219ENST00000512040 RREB1Q92766 1687 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 SPDYE5A6NIY4 337 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 ANP32CO43423 234 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 PPFIA4O75335 1185 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 ARID4AP29374 1257 aaPredicted RBP5.7□□□□□ -1.5
MATR3-219ENST00000512040 XPCQ01831 940 aaPredicted RBP5.7□□□□□ -1.5
MATR3-219ENST00000512040 SETDB1Q15047 1291 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 TMEM259Q4ZIN3 620 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 DEFB132Q7Z7B7 95 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 RETREG3Q86VR2 466 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 LRRC59Q96AG4 307 aaKnown RBP5.7□□□□□ -1.5
MATR3-219ENST00000512040 THAP11Q96EK4 314 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 SPSB2Q99619 263 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 USB1Q9BQ65 265 aaKnown RBP5.7□□□□□ -1.5
MATR3-219ENST00000512040 JADE2Q9NQC1 790 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 USP21Q9UK80 565 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 RPS6KL1Q9Y6S9 549 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 RGPD1P0DJD0 1748 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 NUP188Q5SRE5 1749 aa5.7□□□□□ -1.5
MATR3-219ENST00000512040 TECPR2O15040 1411 aa5.69□□□□□ -1.5
MATR3-219ENST00000512040 CCDC96Q2M329 555 aa5.69□□□□□ -1.5
MATR3-219ENST00000512040 HELBQ8NG08 1087 aaPredicted RBP5.69□□□□□ -1.5
MATR3-219ENST00000512040 NGLY1Q96IV0 654 aa5.69□□□□□ -1.5
MATR3-219ENST00000512040 KRTAP9-2Q9BYQ4 174 aa5.69□□□□□ -1.5
MATR3-219ENST00000512040 METTL14Q9HCE5 456 aaKnown RBP5.69□□□□□ -1.5
MATR3-219ENST00000512040 NUB1Q9Y5A7 615 aa5.69□□□□□ -1.5
MATR3-219ENST00000512040 PHRF1Q9P1Y6 1649 aaKnown RBP5.69□□□□□ -1.5
MATR3-219ENST00000512040 CAMTA1Q9Y6Y1 1673 aa5.69□□□□□ -1.5
MATR3-219ENST00000512040 BLMP54132 1417 aaPredicted RBP5.68□□□□□ -1.5
MATR3-219ENST00000512040 ADH1BP00325 375 aa5.68□□□□□ -1.5
MATR3-219ENST00000512040 USP17L8P0C7I0 530 aa5.68□□□□□ -1.5
MATR3-219ENST00000512040 CTDSPL2Q05D32 466 aa5.68□□□□□ -1.5
MATR3-219ENST00000512040 WDR78Q5VTH9 848 aa5.68□□□□□ -1.5
MATR3-219ENST00000512040 SND1Q7KZF4 910 aaKnown RBP eCLIP5.68□□□□□ -1.5
MATR3-219ENST00000512040 KRTAP1-3Q8IUG1 177 aa5.68□□□□□ -1.5
MATR3-219ENST00000512040 FAM160A2Q8N612 972 aaPredicted RBP5.68□□□□□ -1.5
MATR3-219ENST00000512040 NKX2-3Q8TAU0 364 aa5.68□□□□□ -1.5
MATR3-219ENST00000512040 TSPAN18Q96SJ8 248 aa5.68□□□□□ -1.5
MATR3-219ENST00000512040 PRDM9Q9NQV7 894 aa5.68□□□□□ -1.5
MATR3-219ENST00000512040 SNRKQ9NRH2 765 aa5.68□□□□□ -1.5
MATR3-219ENST00000512040 TRPC5Q9UL62 973 aaPredicted RBP5.68□□□□□ -1.5
MATR3-219ENST00000512040 CEP350Q5VT06 3117 aa5.68□□□□□ -1.5
MATR3-219ENST00000512040 RPGRIP1LQ68CZ1 1315 aa5.68□□□□□ -1.5
MATR3-219ENST00000512040 CCDC144AA2RUR9 1427 aa5.67□□□□□ -1.5
MATR3-219ENST00000512040 SPATA31E1Q6ZUB1 1445 aa5.67□□□□□ -1.5
MATR3-219ENST00000512040 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
MATR3-219ENST00000512040 CCER2I3L3R5 266 aa5.67□□□□□ -1.5
MATR3-219ENST00000512040 RAB11FIP3O75154 756 aa5.67□□□□□ -1.5
MATR3-219ENST00000512040 ZRANB2O95218 330 aaKnown RBP eCLIP5.67□□□□□ -1.5
MATR3-219ENST00000512040 MCM6Q14566 821 aa5.67□□□□□ -1.5
MATR3-219ENST00000512040 CLEC4GQ6UXB4 293 aa5.67□□□□□ -1.5
MATR3-219ENST00000512040 MAF1Q9H063 256 aa5.67□□□□□ -1.5
MATR3-219ENST00000512040 ADGRB2O60241 1585 aa5.67□□□□□ -1.5
MATR3-219ENST00000512040 PIK3C2GO75747 1445 aa5.66□□□□□ -1.5
MATR3-219ENST00000512040 PER1O15534 1290 aaPredicted RBP5.66□□□□□ -1.5
MATR3-219ENST00000512040 WFS1O76024 890 aa5.66□□□□□ -1.5
MATR3-219ENST00000512040 JUNDP17535 347 aa5.66□□□□□ -1.5
MATR3-219ENST00000512040 KCNC4Q03721 635 aa5.66□□□□□ -1.5
MATR3-219ENST00000512040 MSS51Q4VC12 460 aa5.66□□□□□ -1.5
MATR3-219ENST00000512040 BANK1Q8NDB2 785 aa5.66□□□□□ -1.5
MATR3-219ENST00000512040 LRRN4Q8WUT4 740 aa5.66□□□□□ -1.5
MATR3-219ENST00000512040 GJD4Q96KN9 370 aaPredicted RBP5.66□□□□□ -1.5
MATR3-219ENST00000512040 KIAA1522Q9P206 1035 aaPredicted RBP5.66□□□□□ -1.5
MATR3-219ENST00000512040 FEZ2Q9UHY8 353 aaPredicted RBP5.66□□□□□ -1.5
MATR3-219ENST00000512040 SH3BP1Q9Y3L3 701 aa5.66□□□□□ -1.5
MATR3-219ENST00000512040 ADGRF5Q8IZF2 1346 aa5.66□□□□□ -1.5
MATR3-219ENST00000512040 TNS3Q68CZ2 1445 aa5.65□□□□□ -1.5
MATR3-219ENST00000512040 NRXN1Q9ULB1 1477 aa5.65□□□□□ -1.5
MATR3-219ENST00000512040 COL14A1Q05707 1796 aaKnown RBP5.65□□□□□ -1.5
MATR3-219ENST00000512040 POTECB2RU33 542 aa5.65□□□□□ -1.5
MATR3-219ENST00000512040 CREB3O43889 395 aa5.65□□□□□ -1.5
MATR3-219ENST00000512040 S1PR4O95977 384 aa5.65□□□□□ -1.5
MATR3-219ENST00000512040 FOXD4Q12950 439 aaPredicted RBP5.65□□□□□ -1.5
MATR3-219ENST00000512040 ZFYVE27Q5T4F4 411 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms