RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 RPAINQ86UA6 219 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 WDR75Q8IWA0 830 aaKnown RBP6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 RSPH1Q8WYR4 309 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 TSR2Q969E8 191 aaKnown RBP6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 NUDT16Q96DE0 195 aaKnown RBP6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 PRR36Q9H6K5 1346 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 C1orf167Q5SNV9 1468 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 KNDC1Q76NI1 1749 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 TIMM44O43615 452 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 TDO2P48775 406 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 EIF4G2P78344 907 aaKnown RBP eCLIP6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 HSP90AA2PQ14568 343 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 ZNF746Q6NUN9 644 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 CCDC174Q6PII3 467 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 HSCBQ8IWL3 235 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 NGDNQ8NEJ9 315 aaKnown RBP6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 EPAS1Q99814 870 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 DIS3Q9Y2L1 958 aaKnown RBP6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 GPRASP1Q5JY77 1395 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 DLC1Q96QB1 1528 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 QRICH2Q9H0J4 1663 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 FAM163BP0C2L3 166 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 HSD3B2P26439 372 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 RFC5P40937 340 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 KCTD2Q14681 263 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 SYCP2LQ5T4T6 812 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 NBPF6Q5VWK0 638 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 NBPF5PQ86XG9 351 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 NBPF4Q96M43 638 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 CABP1Q9NZU7 370 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 PHF8Q9UPP1 1060 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 EVC2Q86UK5 1308 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 NCOA3Q9Y6Q9 1424 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 IQSEC2Q5JU85 1478 aa6.16□□□□□ -1.42
TRAPPC11-208ENST00000511955 NUTM2BA6NNL0 878 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC11-208ENST00000511955 NUTM2EB1AL46 878 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC11-208ENST00000511955 NPHP1O15259 732 aa6.15□□□□□ -1.42
TRAPPC11-208ENST00000511955 FOSP01100 380 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC11-208ENST00000511955 NUTM2GQ5VZR2 741 aa6.15□□□□□ -1.42
TRAPPC11-208ENST00000511955 NUTM2AQ8IVF1 878 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC11-208ENST00000511955 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.15□□□□□ -1.42
TRAPPC11-208ENST00000511955 CDC42BPGQ6DT37 1551 aa6.15□□□□□ -1.43
TRAPPC11-208ENST00000511955 DCCP43146 1447 aa6.15□□□□□ -1.43
TRAPPC11-208ENST00000511955 DISP3Q9P2K9 1392 aa6.15□□□□□ -1.43
TRAPPC11-208ENST00000511955 MAN1A1P33908 653 aa6.15□□□□□ -1.43
TRAPPC11-208ENST00000511955 SSR1P43307 286 aaKnown RBP6.15□□□□□ -1.43
TRAPPC11-208ENST00000511955 POU5F1BQ06416 359 aa6.15□□□□□ -1.43
TRAPPC11-208ENST00000511955 SF3B2Q13435 895 aaKnown RBP6.15□□□□□ -1.43
TRAPPC11-208ENST00000511955 CHADLQ6NUI6 762 aa6.15□□□□□ -1.43
TRAPPC11-208ENST00000511955 PPP1R18Q6NYC8 613 aa6.15□□□□□ -1.43
TRAPPC11-208ENST00000511955 TESK2Q96S53 571 aa6.15□□□□□ -1.43
TRAPPC11-208ENST00000511955 ARPC5LQ9BPX5 153 aa6.15□□□□□ -1.43
TRAPPC11-208ENST00000511955 SCAMP3O14828 347 aaKnown RBP6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 CBFA2T2O43439 604 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 PDGFRBP09619 1106 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 TNNI2P48788 182 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 RAVER1Q8IY67 606 aaKnown RBP6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 PRPF38AQ8NAV1 312 aaKnown RBP6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 SNRNP27Q8WVK2 155 aaKnown RBP6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 MUC3BQ9H195 1237 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 OSBPL2Q9H1P3 480 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 RGPD8O14715 1765 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 TULP4Q9NRJ4 1543 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 PPIP5K1Q6PFW1 1433 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 BICDL2A1A5D9 508 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 DNAJC6O75061 913 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 HIP1RO75146 1068 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 RRM1P23921 792 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 TMF1P82094 1093 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 LONRF1Q17RB8 773 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 KRT28Q7Z3Y7 464 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 BANK1Q8NDB2 785 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 MFRPQ9BY79 579 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 SLC12A5Q9H2X9 1139 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 SYNPO2Q9UMS6 1093 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 FARP1Q9Y4F1 1045 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 CCDC61Q9Y6R9 512 aa6.14□□□□□ -1.43
TRAPPC11-208ENST00000511955 ACEP12821 1306 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 C1QTNF12Q5T7M4 302 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 SKAP1Q86WV1 359 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 CABLES1Q8TDN4 633 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 IFT122Q9HBG6 1241 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 ATP7BP35670 1465 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 FMN2Q9NZ56 1722 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 USP32Q8NFA0 1604 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 NPHP3Q7Z494 1330 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 ADAMTS2O95450 1211 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 FGAP02671 866 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 AMPD3Q01432 767 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 NBPF10Q6P3W6 841 aaKnown RBP6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 ZSCAN30Q86W11 494 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 STK32AQ8WU08 396 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 IER2Q9BTL4 223 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 AS3MTQ9HBK9 375 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 CHST12Q9NRB3 414 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 TFIP11Q9UBB9 837 aaKnown RBP6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 PRDM4Q9UKN5 801 aa6.13□□□□□ -1.43
TRAPPC11-208ENST00000511955 PHLPP1O60346 1717 aa6.12□□□□□ -1.43
TRAPPC11-208ENST00000511955 FAM160A1Q05DH4 1040 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms