RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 ZHX1Q9UKY1 873 aaPredicted RBP9.57□□□□□ -0.88
HTT-208ENST00000510626 ZSCAN22P10073 491 aaPredicted RBP9.56□□□□□ -0.88
HTT-208ENST00000510626 SRGAP3O43295 1099 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 SEPT11Q9NVA2 429 aaKnown RBP9.56□□□□□ -0.88
HTT-208ENST00000510626 CFAP58Q5T655 872 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 CNKSR2Q8WXI2 1034 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 ATP2A1O14983 1001 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 PRDM10Q9NQV6 1147 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 ANAPC4Q9UJX5 808 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 ACTN2P35609 894 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 TMTC2Q8N394 836 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 CTNNBL1Q8WYA6 563 aaPredicted RBP9.56□□□□□ -0.88
HTT-208ENST00000510626 UBASH3AP57075 661 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 RBBP5Q15291 538 aaKnown RBP9.56□□□□□ -0.88
HTT-208ENST00000510626 SMC6Q96SB8 1091 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 BICDL2A1A5D9 508 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 KIAA0753Q2KHM9 967 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 EHMT1Q9H9B1 1298 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 BRD2P25440 801 aaKnown RBP9.56□□□□□ -0.88
HTT-208ENST00000510626 NLRP5P59047 1200 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 TMEM57Q8N5G2 664 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 KRT86O43790 486 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 CNGA4Q8IV77 575 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 TBC1D5Q92609 795 aa9.56□□□□□ -0.88
HTT-208ENST00000510626 PODNQ7Z5L7 613 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 TRIM7Q9C029 511 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 VCX3BQ9H321 246 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 EFCC1Q9HA90 598 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 SLC12A7Q9Y666 1083 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 HMOX1P09601 288 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 IRX4P78413 519 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 CCDC6Q16204 474 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 GDAP1L1Q96MZ0 367 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 SSFA2P28290 1259 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 SOS1Q07889 1333 aaPredicted RBP9.55□□□□□ -0.88
HTT-208ENST00000510626 LARP1Q6PKG0 1096 aaKnown RBP9.55□□□□□ -0.88
HTT-208ENST00000510626 ERCC6LQ2NKX8 1250 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 LRRC45Q96CN5 670 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 PPFIA1Q13136 1202 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 GIGYF1O75420 1035 aaPredicted RBP9.55□□□□□ -0.88
HTT-208ENST00000510626 CCDC114Q96M63 670 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 ATP2B1P20020 1258 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 MED4Q9NPJ6 270 aa9.55□□□□□ -0.88
HTT-208ENST00000510626 ARAP1Q96P48 1450 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 SYT1P21579 422 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 SLF2Q8IX21 1173 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 TSNARE1Q96NA8 513 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 IQSEC3Q9UPP2 1182 aaPredicted RBP9.54□□□□□ -0.88
HTT-208ENST00000510626 TMEM132AQ24JP5 1023 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 TCP11L1Q9NUJ3 509 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 HYPKQ9NX55 129 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 TSKSQ9UJT2 592 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 NPHP3Q7Z494 1330 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 MAP4K4O95819 1239 aaPredicted RBP9.54□□□□□ -0.88
HTT-208ENST00000510626 CATIPQ7Z7H3 387 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.54□□□□□ -0.88
HTT-208ENST00000510626 SPG7Q9UQ90 795 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 LUC7L2Q9Y383 392 aaKnown RBP9.54□□□□□ -0.88
HTT-208ENST00000510626 MLECQ14165 292 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 ARHGAP24Q8N264 748 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 ITGB1BP2Q9UKP3 347 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 FAM184BQ9ULE4 1060 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 ARHGAP5Q13017 1502 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 ZNF500O60304 480 aaPredicted RBP9.54□□□□□ -0.88
HTT-208ENST00000510626 A0A1W2PRG0 241 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 CIB2O75838 187 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 CACNA2D3Q8IZS8 1091 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 KIAA1524Q8TCG1 905 aa9.54□□□□□ -0.88
HTT-208ENST00000510626 STK3Q13188 491 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 AIDAQ96BJ3 306 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 ATP2A2P16615 1042 aaKnown RBP9.53□□□□□ -0.88
HTT-208ENST00000510626 TNNC1P63316 161 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 TRAF1Q13077 416 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 DUSP27Q5VZP5 1158 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 SYKP43405 635 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 SSRP1Q08945 709 aaKnown RBP9.53□□□□□ -0.88
HTT-208ENST00000510626 BRAPQ7Z569 592 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 AFAP1L1Q8TED9 768 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 TRMT1Q9NXH9 659 aaKnown RBP9.53□□□□□ -0.88
HTT-208ENST00000510626 SYNJ2O15056 1496 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 RUFY4Q6ZNE9 571 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 PIBF1Q8WXW3 757 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 CNGA1P29973 690 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 NBPF8Q3BBV2 869 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 JADE2Q9NQC1 790 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 MPHOSPH8Q99549 860 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 GON4LQ3T8J9 2241 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 N4BP3O15049 544 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 NUP133Q8WUM0 1156 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 MTRF1LQ9UGC7 380 aaKnown RBP9.53□□□□□ -0.88
HTT-208ENST00000510626 KIF5AQ12840 1032 aa9.53□□□□□ -0.88
HTT-208ENST00000510626 ATP6V1AP38606 617 aa9.52□□□□□ -0.88
HTT-208ENST00000510626 CCDC113Q9H0I3 377 aa9.52□□□□□ -0.88
HTT-208ENST00000510626 TTC21BQ7Z4L5 1316 aa9.52□□□□□ -0.88
HTT-208ENST00000510626 ARHGEF12Q9NZN5 1544 aa9.52□□□□□ -0.88
HTT-208ENST00000510626 MCM6Q14566 821 aa9.52□□□□□ -0.88
HTT-208ENST00000510626 PRPF40BQ6NWY9 871 aaKnown RBP9.52□□□□□ -0.88
HTT-208ENST00000510626 CNNM1Q9NRU3 951 aa9.52□□□□□ -0.88
HTT-208ENST00000510626 RAD21O60216 631 aa9.52□□□□□ -0.88
HTT-208ENST00000510626 ZNF445P59923 1031 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms