RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 NLRP10Q86W26 655 aa27.46■■□□□ 1.99
UBE2D3-229ENST00000510129 RPGRQ92834 1020 aaKnown RBP27.46■■□□□ 1.99
UBE2D3-229ENST00000510129 MYH16Q9H6N6 1097 aa27.46■■□□□ 1.99
UBE2D3-229ENST00000510129 ABCC12Q96J65 1359 aa27.46■■□□□ 1.99
UBE2D3-229ENST00000510129 C21orf2O43822 256 aa27.45■■□□□ 1.98
UBE2D3-229ENST00000510129 NLRP3Q96P20 1036 aa27.45■■□□□ 1.98
UBE2D3-229ENST00000510129 RNF181Q9P0P0 153 aa27.45■■□□□ 1.98
UBE2D3-229ENST00000510129 SALL2Q9Y467 1007 aaPredicted RBP27.45■■□□□ 1.98
UBE2D3-229ENST00000510129 FANCIQ9NVI1 1328 aa27.44■■□□□ 1.98
UBE2D3-229ENST00000510129 SENP3-EIF4A1A0A087X0R7 540 aa27.44■■□□□ 1.98
UBE2D3-229ENST00000510129 RIC3Q7Z5B4 369 aa27.44■■□□□ 1.98
UBE2D3-229ENST00000510129 TSPYL6Q8N831 410 aa27.44■■□□□ 1.98
UBE2D3-229ENST00000510129 SH3TC1Q8TE82 1336 aa27.43■■□□□ 1.98
UBE2D3-229ENST00000510129 LTBP3Q9NS15 1303 aa27.43■■□□□ 1.98
UBE2D3-229ENST00000510129 HOXA10P31260 410 aaPredicted RBP27.43■■□□□ 1.98
UBE2D3-229ENST00000510129 TRMT112Q9UI30 125 aaKnown RBP27.43■■□□□ 1.98
UBE2D3-229ENST00000510129 TRIM28Q13263 835 aaKnown RBP27.42■■□□□ 1.98
UBE2D3-229ENST00000510129 RBM17Q96I25 401 aaKnown RBP27.42■■□□□ 1.98
UBE2D3-229ENST00000510129 TNRC6CQ9HCJ0 1690 aaKnown RBP27.42■■□□□ 1.98
UBE2D3-229ENST00000510129 SBF1O95248 1867 aa27.42■■□□□ 1.98
UBE2D3-229ENST00000510129 SLX4Q8IY92 1834 aa27.41■■□□□ 1.98
UBE2D3-229ENST00000510129 GRIPAP1Q4V328 841 aa27.41■■□□□ 1.98
UBE2D3-229ENST00000510129 CCDC93Q567U6 631 aa27.41■■□□□ 1.98
UBE2D3-229ENST00000510129 ISCA1Q9BUE6 129 aa27.41■■□□□ 1.98
UBE2D3-229ENST00000510129 TAOK3Q9H2K8 898 aa27.41■■□□□ 1.98
UBE2D3-229ENST00000510129 CACNA1SQ13698 1873 aa27.4■■□□□ 1.98
UBE2D3-229ENST00000510129 HSP90B1P14625 803 aaKnown RBP27.4■■□□□ 1.98
UBE2D3-229ENST00000510129 CC2D2BQ6DHV5 1058 aa27.4■■□□□ 1.98
UBE2D3-229ENST00000510129 RTKN2Q8IZC4 609 aa27.4■■□□□ 1.98
UBE2D3-229ENST00000510129 CRAMP1Q96RY5 1269 aa27.4■■□□□ 1.98
UBE2D3-229ENST00000510129 PHAXQ9H814 394 aaKnown RBP27.4■■□□□ 1.98
UBE2D3-229ENST00000510129 FER1L6Q2WGJ9 1857 aa27.39■■□□□ 1.98
UBE2D3-229ENST00000510129 NFKBIEO00221 500 aa27.39■■□□□ 1.98
UBE2D3-229ENST00000510129 RASSF7Q02833 373 aa27.39■■□□□ 1.98
UBE2D3-229ENST00000510129 C7orf43Q8WVR3 580 aa27.39■■□□□ 1.98
UBE2D3-229ENST00000510129 ZNF219Q9P2Y4 722 aaPredicted RBP27.39■■□□□ 1.98
UBE2D3-229ENST00000510129 KDM2BQ8NHM5 1336 aa27.38■■□□□ 1.97
UBE2D3-229ENST00000510129 ZNF526Q8TF50 670 aaPredicted RBP27.37■■□□□ 1.97
UBE2D3-229ENST00000510129 TMX4Q9H1E5 349 aaPredicted RBP27.36■■□□□ 1.97
UBE2D3-229ENST00000510129 KSR2Q6VAB6 950 aa27.35■■□□□ 1.97
UBE2D3-229ENST00000510129 ZNF521Q96K83 1311 aa27.35■■□□□ 1.97
UBE2D3-229ENST00000510129 CACNA1FO60840 1977 aa27.35■■□□□ 1.97
UBE2D3-229ENST00000510129 ATP5J2-PTCD1G3V325 749 aa27.34■■□□□ 1.97
UBE2D3-229ENST00000510129 SLC4A2P04920 1241 aa27.34■■□□□ 1.97
UBE2D3-229ENST00000510129 CCDC191Q8NCU4 936 aa27.34■■□□□ 1.97
UBE2D3-229ENST00000510129 METTL22Q9BUU2 404 aaPredicted RBP27.34■■□□□ 1.97
UBE2D3-229ENST00000510129 VAMP4O75379 141 aa27.33■■□□□ 1.97
UBE2D3-229ENST00000510129 EXOSC9Q06265 439 aaKnown RBP27.33■■□□□ 1.97
UBE2D3-229ENST00000510129 NEXNQ0ZGT2 675 aa27.33■■□□□ 1.97
UBE2D3-229ENST00000510129 C1QTNF8P60827 252 aa27.32■■□□□ 1.96
UBE2D3-229ENST00000510129 FKBP4Q02790 459 aaKnown RBP eCLIP27.32■■□□□ 1.962e-9■■□□□ 12.2
UBE2D3-229ENST00000510129 MYD88Q99836 296 aa27.32■■□□□ 1.96
UBE2D3-229ENST00000510129 HCLS1P14317 486 aaPredicted RBP27.31■■□□□ 1.96
UBE2D3-229ENST00000510129 ZBTB38Q8NAP3 1195 aaPredicted RBP27.31■■□□□ 1.96
UBE2D3-229ENST00000510129 MAP3K2Q9Y2U5 619 aa27.31■■□□□ 1.96
UBE2D3-229ENST00000510129 DICER1Q9UPY3 1922 aaKnown RBP27.3■■□□□ 1.96
UBE2D3-229ENST00000510129 PPEF1O14829 653 aaPredicted RBP27.3■■□□□ 1.96
UBE2D3-229ENST00000510129 BBOX1O75936 387 aa27.3■■□□□ 1.96
UBE2D3-229ENST00000510129 DDX46Q7L014 1031 aaKnown RBP27.3■■□□□ 1.96
UBE2D3-229ENST00000510129 CWC25Q9NXE8 425 aaPredicted RBP27.3■■□□□ 1.96
UBE2D3-229ENST00000510129 TIAM2Q8IVF5 1701 aa27.3■■□□□ 1.96
UBE2D3-229ENST00000510129 CCDC88AQ3V6T2 1871 aa27.3■■□□□ 1.96
UBE2D3-229ENST00000510129 PI4KAP2A4QPH2 592 aa27.29■■□□□ 1.96
UBE2D3-229ENST00000510129 E9PSI1 815 aa27.29■■□□□ 1.96
UBE2D3-229ENST00000510129 DPY19L2Q6NUT2 758 aa27.29■■□□□ 1.96
UBE2D3-229ENST00000510129 TMC4Q7Z404 712 aa27.29■■□□□ 1.96
UBE2D3-229ENST00000510129 PI4KAP1Q8N8J0 262 aa27.29■■□□□ 1.96
UBE2D3-229ENST00000510129 FAM89AQ96GI7 184 aa27.29■■□□□ 1.96
UBE2D3-229ENST00000510129 PSMD1Q99460 953 aa27.29■■□□□ 1.96
UBE2D3-229ENST00000510129 SPINK5Q9NQ38 1064 aaPredicted RBP27.29■■□□□ 1.96
UBE2D3-229ENST00000510129 PRELPP51888 382 aa27.28■■□□□ 1.96
UBE2D3-229ENST00000510129 FLIIQ13045 1269 aa27.28■■□□□ 1.96
UBE2D3-229ENST00000510129 DIEXFQ68CQ4 756 aaKnown RBP27.28■■□□□ 1.96
UBE2D3-229ENST00000510129 C3orf67Q6ZVT6 689 aa27.28■■□□□ 1.96
UBE2D3-229ENST00000510129 LAMB2P55268 1798 aa27.27■■□□□ 1.96
UBE2D3-229ENST00000510129 GLTPD2A6NH11 291 aa27.27■■□□□ 1.96
UBE2D3-229ENST00000510129 PCCAP05165 728 aaPredicted RBP27.27■■□□□ 1.96
UBE2D3-229ENST00000510129 SF3B3Q15393 1217 aaKnown RBP27.27■■□□□ 1.96
UBE2D3-229ENST00000510129 ABCC4O15439 1325 aa27.26■■□□□ 1.95
UBE2D3-229ENST00000510129 IRS4O14654 1257 aaPredicted RBP27.26■■□□□ 1.95
UBE2D3-229ENST00000510129 TCERG1O14776 1098 aaKnown RBP27.26■■□□□ 1.95
UBE2D3-229ENST00000510129 ATP6V0A2Q9Y487 856 aa27.26■■□□□ 1.95
UBE2D3-229ENST00000510129 DDX60Q8IY21 1712 aaKnown RBP27.26■■□□□ 1.95
UBE2D3-229ENST00000510129 KIF3CO14782 793 aa27.25■■□□□ 1.95
UBE2D3-229ENST00000510129 FKBP5Q13451 457 aaPredicted RBP27.25■■□□□ 1.95
UBE2D3-229ENST00000510129 SYNE4Q8N205 404 aa27.25■■□□□ 1.95
UBE2D3-229ENST00000510129 GRAPQ13588 217 aa27.24■■□□□ 1.95
UBE2D3-229ENST00000510129 GRAPLQ8TC17 118 aaPredicted RBP27.24■■□□□ 1.95
UBE2D3-229ENST00000510129 C16orf71Q8IYS4 520 aaPredicted RBP27.23■■□□□ 1.95
UBE2D3-229ENST00000510129 G2E3Q7L622 706 aa27.22■■□□□ 1.95
UBE2D3-229ENST00000510129 SP8Q8IXZ3 490 aa27.22■■□□□ 1.95
UBE2D3-229ENST00000510129 SUPT20HQ8NEM7 779 aa27.22■■□□□ 1.95
UBE2D3-229ENST00000510129 ZNF428Q96B54 188 aa27.22■■□□□ 1.95
UBE2D3-229ENST00000510129 VPS33BQ9H267 617 aa27.22■■□□□ 1.95
UBE2D3-229ENST00000510129 NMRK2Q9NPI5 230 aa27.22■■□□□ 1.95
UBE2D3-229ENST00000510129 SNED1Q8TER0 1413 aa27.22■■□□□ 1.95
UBE2D3-229ENST00000510129 CDHR2Q9BYE9 1310 aa27.21■■□□□ 1.95
UBE2D3-229ENST00000510129 TOMM70O94826 608 aa27.21■■□□□ 1.95
UBE2D3-229ENST00000510129 IARSP41252 1262 aaKnown RBP27.21■■□□□ 1.95
UBE2D3-229ENST00000510129 OLFM4Q6UX06 510 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms