RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	FAM177B	A6PVY3	158 aa		11.59	□□□□□ -0.55
RACK1-222	ENST00000509535	HMOX1	P09601	288 aa		11.59	□□□□□ -0.55
RACK1-222	ENST00000509535	MTHFSD	Q2M296	383 aa	Known RBP	11.59	□□□□□ -0.55
RACK1-222	ENST00000509535	CLEC4G	Q6UXB4	293 aa		11.59	□□□□□ -0.55
RACK1-222	ENST00000509535	GCC1	Q96CN9	775 aa		11.59	□□□□□ -0.55
RACK1-222	ENST00000509535	POLR3GL	Q9BT43	218 aa		11.59	□□□□□ -0.55
RACK1-222	ENST00000509535	GPRC5D	Q9NZD1	345 aa		11.59	□□□□□ -0.55
RACK1-222	ENST00000509535	ZNF652	Q9Y2D9	606 aa		11.59	□□□□□ -0.55
RACK1-222	ENST00000509535	PIP4K2A	P48426	406 aa	Predicted RBP	11.58	□□□□□ -0.56
RACK1-222	ENST00000509535	HUNK	P57058	714 aa		11.58	□□□□□ -0.56
RACK1-222	ENST00000509535	CC2D2B	Q6DHV5	1058 aa		11.58	□□□□□ -0.56
RACK1-222	ENST00000509535	MORC1	Q86VD1	984 aa		11.58	□□□□□ -0.56
RACK1-222	ENST00000509535	NIM1K	Q8IY84	436 aa		11.58	□□□□□ -0.56
RACK1-222	ENST00000509535	NBPF15	Q8N660	670 aa		11.58	□□□□□ -0.56
RACK1-222	ENST00000509535	PANK3	Q9H999	370 aa		11.58	□□□□□ -0.56
RACK1-222	ENST00000509535	SAGE1	Q9NXZ1	904 aa		11.58	□□□□□ -0.56
RACK1-222	ENST00000509535	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.58	□□□□□ -0.56	4e-11	■□□□□ 9
RACK1-222	ENST00000509535	MKI67	P46013	3256 aa	Known RBP	11.58	□□□□□ -0.56
RACK1-222	ENST00000509535	CEP290	O15078	2479 aa		11.57	□□□□□ -0.56
RACK1-222	ENST00000509535	TRPA1	O75762	1119 aa		11.57	□□□□□ -0.56
RACK1-222	ENST00000509535	TEF	Q10587	303 aa		11.57	□□□□□ -0.56
RACK1-222	ENST00000509535	FMNL2	Q96PY5	1086 aa		11.57	□□□□□ -0.56
RACK1-222	ENST00000509535	PGAP2	Q9UHJ9	254 aa		11.57	□□□□□ -0.56
RACK1-222	ENST00000509535	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.56	□□□□□ -0.56
RACK1-222	ENST00000509535	PER1	O15534	1290 aa	Predicted RBP	11.56	□□□□□ -0.56
RACK1-222	ENST00000509535	CTU1	Q7Z7A3	348 aa	Known RBP	11.56	□□□□□ -0.56
RACK1-222	ENST00000509535	NPC1L1	Q9UHC9	1359 aa		11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	FAM155A	B1AL88	458 aa	Predicted RBP	11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	PPIP5K2	O43314	1243 aa		11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	GTF2E1	P29083	439 aa	Predicted RBP	11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	GMPS	P49915	693 aa	Predicted RBP	11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	CRY2	Q49AN0	593 aa		11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	GRIPAP1	Q4V328	841 aa		11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	HABP4	Q5JVS0	413 aa	Known RBP	11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	CDC37L1	Q7L3B6	337 aa		11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	SLC51A	Q86UW1	340 aa		11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	ZC3H15	Q8WU90	426 aa	Known RBP	11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	RNF186	Q9NXI6	227 aa		11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	HPS5	Q9UPZ3	1129 aa		11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	KIAA0100	Q14667	2235 aa	Known RBP	11.55	□□□□□ -0.56
RACK1-222	ENST00000509535	ABCC12	Q96J65	1359 aa		11.54	□□□□□ -0.56
RACK1-222	ENST00000509535	HIRA	P54198	1017 aa	Predicted RBP	11.54	□□□□□ -0.56
RACK1-222	ENST00000509535	KIF23	Q02241	960 aa	Predicted RBP	11.54	□□□□□ -0.56
RACK1-222	ENST00000509535	CXCL9	Q07325	125 aa		11.54	□□□□□ -0.56
RACK1-222	ENST00000509535	RGMB	Q6NW40	437 aa		11.54	□□□□□ -0.56
RACK1-222	ENST00000509535	IL17RE	Q8NFR9	667 aa		11.54	□□□□□ -0.56
RACK1-222	ENST00000509535	RPGR	Q92834	1020 aa	Known RBP	11.54	□□□□□ -0.56
RACK1-222	ENST00000509535	USP16	Q9Y5T5	823 aa		11.54	□□□□□ -0.56
RACK1-222	ENST00000509535	TCERG1	O14776	1098 aa	Known RBP	11.53	□□□□□ -0.56
RACK1-222	ENST00000509535	AOC3	Q16853	763 aa		11.53	□□□□□ -0.56
RACK1-222	ENST00000509535	DLK2	Q6UY11	383 aa		11.53	□□□□□ -0.56
RACK1-222	ENST00000509535	USP48	Q86UV5	1035 aa		11.53	□□□□□ -0.56
RACK1-222	ENST00000509535	TRPM4	Q8TD43	1214 aa		11.53	□□□□□ -0.56
RACK1-222	ENST00000509535	LAMB4	A4D0S4	1761 aa		11.53	□□□□□ -0.56
RACK1-222	ENST00000509535	LAMB2	P55268	1798 aa		11.53	□□□□□ -0.56
RACK1-222	ENST00000509535	CDHR2	Q9BYE9	1310 aa		11.53	□□□□□ -0.56
RACK1-222	ENST00000509535	TAF1	P21675	1872 aa		11.53	□□□□□ -0.56
RACK1-222	ENST00000509535	TRIOBP	Q9H2D6	2365 aa		11.53	□□□□□ -0.56
RACK1-222	ENST00000509535	RIC1	Q4ADV7	1423 aa		11.52	□□□□□ -0.56
RACK1-222	ENST00000509535	GNAT3	A8MTJ3	354 aa		11.52	□□□□□ -0.57
RACK1-222	ENST00000509535	KCNQ3	O43525	872 aa		11.52	□□□□□ -0.57
RACK1-222	ENST00000509535	HOXA10	P31260	410 aa	Predicted RBP	11.52	□□□□□ -0.57
RACK1-222	ENST00000509535	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.52	□□□□□ -0.57
RACK1-222	ENST00000509535	NUTM1	Q86Y26	1132 aa		11.52	□□□□□ -0.57
RACK1-222	ENST00000509535	CCDC102A	Q96A19	550 aa		11.52	□□□□□ -0.57
RACK1-222	ENST00000509535	BCL2L13	Q9BXK5	485 aa		11.52	□□□□□ -0.57
RACK1-222	ENST00000509535	ZNRF3	Q9ULT6	936 aa		11.52	□□□□□ -0.57
RACK1-222	ENST00000509535	CUL9	Q8IWT3	2517 aa		11.51	□□□□□ -0.57
RACK1-222	ENST00000509535	CENPF	P49454	3210 aa		11.51	□□□□□ -0.57
RACK1-222	ENST00000509535	PRAMEF22	A3QJZ6	481 aa		11.51	□□□□□ -0.57
RACK1-222	ENST00000509535	PPEF1	O14829	653 aa	Predicted RBP	11.51	□□□□□ -0.57
RACK1-222	ENST00000509535	RGL2	O15211	777 aa		11.51	□□□□□ -0.57
RACK1-222	ENST00000509535	ZNF157	P51786	506 aa	Predicted RBP	11.51	□□□□□ -0.57
RACK1-222	ENST00000509535	HLF	Q16534	295 aa		11.51	□□□□□ -0.57
RACK1-222	ENST00000509535	NYX	Q9GZU5	481 aa		11.51	□□□□□ -0.57
RACK1-222	ENST00000509535	GBA2	Q9HCG7	927 aa	Predicted RBP	11.51	□□□□□ -0.57
RACK1-222	ENST00000509535	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.51	□□□□□ -0.57
RACK1-222	ENST00000509535	PAPPA2	Q9BXP8	1791 aa		11.5	□□□□□ -0.57
RACK1-222	ENST00000509535	BTBD11	A6QL63	1104 aa		11.5	□□□□□ -0.57
RACK1-222	ENST00000509535	PKN2	Q16513	984 aa	Known RBP	11.5	□□□□□ -0.57
RACK1-222	ENST00000509535	C2orf69	Q8N8R5	385 aa		11.5	□□□□□ -0.57
RACK1-222	ENST00000509535	CSRNP1	Q96S65	589 aa		11.5	□□□□□ -0.57
RACK1-222	ENST00000509535	VPS33B	Q9H267	617 aa		11.5	□□□□□ -0.57
RACK1-222	ENST00000509535	HTT	P42858	3142 aa		11.49	□□□□□ -0.57
RACK1-222	ENST00000509535	ANKRD36C	Q5JPF3	1778 aa		11.49	□□□□□ -0.57
RACK1-222	ENST00000509535	SHTN1	A0MZ66	631 aa		11.49	□□□□□ -0.57
RACK1-222	ENST00000509535	NBPF26	B4DH59	902 aa		11.49	□□□□□ -0.57
RACK1-222	ENST00000509535	RAD17	O75943	681 aa		11.49	□□□□□ -0.57
RACK1-222	ENST00000509535	NBPF10	Q6P3W6	841 aa	Known RBP	11.49	□□□□□ -0.57
RACK1-222	ENST00000509535	CRAMP1	Q96RY5	1269 aa		11.49	□□□□□ -0.57
RACK1-222	ENST00000509535	CNOT7	Q9UIV1	285 aa	Known RBP	11.49	□□□□□ -0.57
RACK1-222	ENST00000509535	CEMIP	Q8WUJ3	1361 aa		11.49	□□□□□ -0.57
RACK1-222	ENST00000509535		H7C1D1	291 aa		11.48	□□□□□ -0.57
RACK1-222	ENST00000509535	SLC10A3	P09131	477 aa		11.48	□□□□□ -0.57
RACK1-222	ENST00000509535	SNRPA1	P09661	255 aa	Known RBP	11.48	□□□□□ -0.57
RACK1-222	ENST00000509535	FXR1	P51114	621 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
RACK1-222	ENST00000509535	TNIP1	Q15025	636 aa		11.48	□□□□□ -0.57
RACK1-222	ENST00000509535	KRT26	Q7Z3Y9	468 aa		11.48	□□□□□ -0.57
RACK1-222	ENST00000509535	GAS2L2	Q8NHY3	880 aa		11.48	□□□□□ -0.57
RACK1-222	ENST00000509535	RBM17	Q96I25	401 aa	Known RBP	11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms