RNA–Protein interactions for RNA: ENST00000509198.1

LRPAP1-203, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 2

Gene LRPAP1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-203ENST00000509198 CCDC93Q567U6 631 aa25.57■■□□□ 1.68
LRPAP1-203ENST00000509198 C8orf58Q8NAV2 365 aa25.57■■□□□ 1.68
LRPAP1-203ENST00000509198 ARFGEF2Q9Y6D5 1785 aa25.56■■□□□ 1.68
LRPAP1-203ENST00000509198 CCDC30Q5VVM6 783 aa25.56■■□□□ 1.68
LRPAP1-203ENST00000509198 NLRP10Q86W26 655 aa25.56■■□□□ 1.68
LRPAP1-203ENST00000509198 FAM9BQ8IZU0 186 aa25.56■■□□□ 1.68
LRPAP1-203ENST00000509198 NLRP3Q96P20 1036 aa25.56■■□□□ 1.68
LRPAP1-203ENST00000509198 SBF1O95248 1867 aa25.55■■□□□ 1.68
LRPAP1-203ENST00000509198 GOLGA2Q08379 1002 aa25.55■■□□□ 1.68
LRPAP1-203ENST00000509198 RTKN2Q8IZC4 609 aa25.55■■□□□ 1.68
LRPAP1-203ENST00000509198 TSR2Q969E8 191 aaKnown RBP25.55■■□□□ 1.68
LRPAP1-203ENST00000509198 RBM17Q96I25 401 aaKnown RBP25.55■■□□□ 1.68
LRPAP1-203ENST00000509198 TRMT112Q9UI30 125 aaKnown RBP25.55■■□□□ 1.68
LRPAP1-203ENST00000509198 SLX4Q8IY92 1834 aa25.55■■□□□ 1.68
LRPAP1-203ENST00000509198 KIF3CO14782 793 aa25.54■■□□□ 1.68
LRPAP1-203ENST00000509198 HOXA10P31260 410 aaPredicted RBP25.54■■□□□ 1.68
LRPAP1-203ENST00000509198 SLC10A5Q5PT55 438 aa25.54■■□□□ 1.68
LRPAP1-203ENST00000509198 C7orf43Q8WVR3 580 aa25.54■■□□□ 1.68
LRPAP1-203ENST00000509198 TNRC6CQ9HCJ0 1690 aaKnown RBP25.53■■□□□ 1.68
LRPAP1-203ENST00000509198 ANKRD36CQ5JPF3 1778 aa25.52■■□□□ 1.68
LRPAP1-203ENST00000509198 PRELPP51888 382 aa25.52■■□□□ 1.68
LRPAP1-203ENST00000509198 RIC3Q7Z5B4 369 aa25.52■■□□□ 1.68
LRPAP1-203ENST00000509198 WDR63Q8IWG1 891 aa25.52■■□□□ 1.68
LRPAP1-203ENST00000509198 CRAMP1Q96RY5 1269 aa25.52■■□□□ 1.68
LRPAP1-203ENST00000509198 NMRK2Q9NPI5 230 aa25.52■■□□□ 1.68
LRPAP1-203ENST00000509198 SH3TC1Q8TE82 1336 aa25.52■■□□□ 1.68
LRPAP1-203ENST00000509198 CACNA1SQ13698 1873 aa25.51■■□□□ 1.67
LRPAP1-203ENST00000509198 DDX58O95786 925 aaKnown RBP25.51■■□□□ 1.67
LRPAP1-203ENST00000509198 CC2D2BQ6DHV5 1058 aa25.51■■□□□ 1.67
LRPAP1-203ENST00000509198 DPY19L2Q6NUT2 758 aa25.51■■□□□ 1.67
LRPAP1-203ENST00000509198 C16orf71Q8IYS4 520 aaPredicted RBP25.51■■□□□ 1.67
LRPAP1-203ENST00000509198 STK31Q9BXU1 1019 aa25.51■■□□□ 1.67
LRPAP1-203ENST00000509198 SALL2Q9Y467 1007 aaPredicted RBP25.51■■□□□ 1.67
LRPAP1-203ENST00000509198 FER1L6Q2WGJ9 1857 aa25.51■■□□□ 1.67
LRPAP1-203ENST00000509198 GRIPAP1Q4V328 841 aa25.5■■□□□ 1.67
LRPAP1-203ENST00000509198 TMX4Q9H1E5 349 aaPredicted RBP25.5■■□□□ 1.67
LRPAP1-203ENST00000509198 GLTPD2A6NH11 291 aa25.49■■□□□ 1.67
LRPAP1-203ENST00000509198 TOMM70O94826 608 aa25.49■■□□□ 1.67
LRPAP1-203ENST00000509198 FKBP4Q02790 459 aaKnown RBP eCLIP25.49■■□□□ 1.675e-7■■■■□ 19.8
LRPAP1-203ENST00000509198 TSPYL6Q8N831 410 aa25.49■■□□□ 1.67
LRPAP1-203ENST00000509198 PHAXQ9H814 394 aaKnown RBP25.49■■□□□ 1.67
LRPAP1-203ENST00000509198 TWISTNBQ3B726 338 aaPredicted RBP25.48■■□□□ 1.67
LRPAP1-203ENST00000509198 ISCA1Q9BUE6 129 aa25.48■■□□□ 1.67
LRPAP1-203ENST00000509198 ATP5J2-PTCD1G3V325 749 aa25.47■■□□□ 1.67
LRPAP1-203ENST00000509198 HCLS1P14317 486 aaPredicted RBP25.47■■□□□ 1.67
LRPAP1-203ENST00000509198 TRIM28Q13263 835 aaKnown RBP25.47■■□□□ 1.67
LRPAP1-203ENST00000509198 TIAM2Q8IVF5 1701 aa25.46■■□□□ 1.67
LRPAP1-203ENST00000509198 C3orf67Q6ZVT6 689 aa25.46■■□□□ 1.67
LRPAP1-203ENST00000509198 RRAGCQ9HB90 399 aa25.46■■□□□ 1.67
LRPAP1-203ENST00000509198 FANCIQ9NVI1 1328 aa25.45■■□□□ 1.66
LRPAP1-203ENST00000509198 PPEF1O14829 653 aaPredicted RBP25.45■■□□□ 1.66
LRPAP1-203ENST00000509198 HSP90B1P14625 803 aaKnown RBP25.45■■□□□ 1.66
LRPAP1-203ENST00000509198 OLFM4Q6UX06 510 aa25.45■■□□□ 1.66
LRPAP1-203ENST00000509198 DDX46Q7L014 1031 aaKnown RBP25.44■■□□□ 1.66
LRPAP1-203ENST00000509198 PSMD1Q99460 953 aa25.44■■□□□ 1.66
LRPAP1-203ENST00000509198 VEGFAP15692 232 aaPredicted RBP25.43■■□□□ 1.66
LRPAP1-203ENST00000509198 SYNE4Q8N205 404 aa25.43■■□□□ 1.66
LRPAP1-203ENST00000509198 FAM89AQ96GI7 184 aa25.43■■□□□ 1.66
LRPAP1-203ENST00000509198 MYH16Q9H6N6 1097 aa25.43■■□□□ 1.66
LRPAP1-203ENST00000509198 ZNF277Q9NRM2 450 aaPredicted RBP25.43■■□□□ 1.66
LRPAP1-203ENST00000509198 CCDC88AQ3V6T2 1871 aa25.43■■□□□ 1.66
LRPAP1-203ENST00000509198 BBOX1O75936 387 aa25.42■■□□□ 1.66
LRPAP1-203ENST00000509198 MYD88Q99836 296 aa25.42■■□□□ 1.66
LRPAP1-203ENST00000509198 RBM46Q8TBY0 533 aaKnown RBP25.41■■□□□ 1.66
LRPAP1-203ENST00000509198 ZNF428Q96B54 188 aa25.41■■□□□ 1.66
LRPAP1-203ENST00000509198 ABCC4O15439 1325 aa25.4■■□□□ 1.66
LRPAP1-203ENST00000509198 DICER1Q9UPY3 1922 aaKnown RBP25.4■■□□□ 1.66
LRPAP1-203ENST00000509198 TCERG1O14776 1098 aaKnown RBP25.4■■□□□ 1.66
LRPAP1-203ENST00000509198 SLC4A2P04920 1241 aa25.4■■□□□ 1.66
LRPAP1-203ENST00000509198 IARSP41252 1262 aaKnown RBP25.4■■□□□ 1.66
LRPAP1-203ENST00000509198 KSR2Q6VAB6 950 aa25.4■■□□□ 1.66
LRPAP1-203ENST00000509198 ZBTB38Q8NAP3 1195 aaPredicted RBP25.4■■□□□ 1.66
LRPAP1-203ENST00000509198 CCDC191Q8NCU4 936 aa25.4■■□□□ 1.66
LRPAP1-203ENST00000509198 METTL22Q9BUU2 404 aaPredicted RBP25.4■■□□□ 1.66
LRPAP1-203ENST00000509198 ATP6V0A2Q9Y487 856 aa25.4■■□□□ 1.66
LRPAP1-203ENST00000509198 HSPA6P17066 643 aa25.39■■□□□ 1.66
LRPAP1-203ENST00000509198 NEXNQ0ZGT2 675 aa25.39■■□□□ 1.66
LRPAP1-203ENST00000509198 JDP2Q8WYK2 163 aa25.39■■□□□ 1.66
LRPAP1-203ENST00000509198 MAP3K2Q9Y2U5 619 aa25.39■■□□□ 1.66
LRPAP1-203ENST00000509198 RTL5Q5HYW3 569 aaPredicted RBP25.38■■□□□ 1.65
LRPAP1-203ENST00000509198 TMC4Q7Z404 712 aa25.38■■□□□ 1.65
LRPAP1-203ENST00000509198 CWC25Q9NXE8 425 aaPredicted RBP25.38■■□□□ 1.65
LRPAP1-203ENST00000509198 PI4KAP2A4QPH2 592 aa25.37■■□□□ 1.65
LRPAP1-203ENST00000509198 IRS4O14654 1257 aaPredicted RBP25.37■■□□□ 1.65
LRPAP1-203ENST00000509198 EXOSC9Q06265 439 aaKnown RBP25.37■■□□□ 1.65
LRPAP1-203ENST00000509198 GRAPQ13588 217 aa25.37■■□□□ 1.65
LRPAP1-203ENST00000509198 PI4KAP1Q8N8J0 262 aa25.37■■□□□ 1.65
LRPAP1-203ENST00000509198 GRAPLQ8TC17 118 aaPredicted RBP25.37■■□□□ 1.65
LRPAP1-203ENST00000509198 FSTL1Q12841 308 aa25.36■■□□□ 1.65
LRPAP1-203ENST00000509198 SF3B3Q15393 1217 aaKnown RBP25.36■■□□□ 1.65
LRPAP1-203ENST00000509198 SP8Q8IXZ3 490 aa25.36■■□□□ 1.65
LRPAP1-203ENST00000509198 SNED1Q8TER0 1413 aa25.36■■□□□ 1.65
LRPAP1-203ENST00000509198 VAMP4O75379 141 aa25.35■■□□□ 1.65
LRPAP1-203ENST00000509198 SUPT20HQ8NEM7 779 aa25.35■■□□□ 1.65
LRPAP1-203ENST00000509198 DDNO94850 711 aaPredicted RBP25.34■■□□□ 1.65
LRPAP1-203ENST00000509198 PCCAP05165 728 aaPredicted RBP25.34■■□□□ 1.65
LRPAP1-203ENST00000509198 SMC1BQ8NDV3 1235 aa25.34■■□□□ 1.65
LRPAP1-203ENST00000509198 LAMB2P55268 1798 aa25.33■■□□□ 1.65
LRPAP1-203ENST00000509198 IQCA1LA6NCM1 817 aa25.33■■□□□ 1.65
LRPAP1-203ENST00000509198 DPP8Q6V1X1 898 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms