RNA–Protein interactions for RNA: ENST00000508502.5

SEC31A-227, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC31A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-227ENST00000508502 KCNB2Q92953 911 aa11.71□□□□□ -0.53
SEC31A-227ENST00000508502 MYD88Q99836 296 aa11.71□□□□□ -0.53
SEC31A-227ENST00000508502 FSD1Q9BTV5 496 aa11.71□□□□□ -0.53
SEC31A-227ENST00000508502 NOL7Q9UMY1 257 aaKnown RBP11.71□□□□□ -0.53
SEC31A-227ENST00000508502 SIPA1L3O60292 1781 aaPredicted RBP11.71□□□□□ -0.54
SEC31A-227ENST00000508502 TCHHQ07283 1943 aa11.71□□□□□ -0.54
SEC31A-227ENST00000508502 ZSCAN31Q96LW9 406 aaPredicted RBP11.71□□□□□ -0.54
SEC31A-227ENST00000508502 CAMTA1Q9Y6Y1 1673 aa11.7□□□□□ -0.54
SEC31A-227ENST00000508502 RGPD5Q99666 1765 aa11.7□□□□□ -0.54
SEC31A-227ENST00000508502 TATP17735 454 aaPredicted RBP11.7□□□□□ -0.54
SEC31A-227ENST00000508502 SH2B1Q9NRF2 756 aaPredicted RBP11.7□□□□□ -0.54
SEC31A-227ENST00000508502 ATP6V1DQ9Y5K8 247 aa11.7□□□□□ -0.54
SEC31A-227ENST00000508502 FIBPO43427 364 aa11.7□□□□□ -0.54
SEC31A-227ENST00000508502 GCKRQ14397 625 aa11.7□□□□□ -0.54
SEC31A-227ENST00000508502 EPHA10Q5JZY3 1008 aa11.7□□□□□ -0.54
SEC31A-227ENST00000508502 MAP4K1Q92918 833 aa11.7□□□□□ -0.54
SEC31A-227ENST00000508502 PHKG2P15735 406 aa11.7□□□□□ -0.54
SEC31A-227ENST00000508502 PIP4K2AP48426 406 aaPredicted RBP11.7□□□□□ -0.54
SEC31A-227ENST00000508502 NECAB1Q8N987 351 aa11.7□□□□□ -0.54
SEC31A-227ENST00000508502 JARID2Q92833 1246 aaPredicted RBP11.7□□□□□ -0.54
SEC31A-227ENST00000508502 ZNF496Q96IT1 587 aaPredicted RBP11.7□□□□□ -0.54
SEC31A-227ENST00000508502 TRPM3Q9HCF6 1732 aaPredicted RBP11.7□□□□□ -0.54
SEC31A-227ENST00000508502 KDM6AO15550 1401 aaPredicted RBP11.69□□□□□ -0.54
SEC31A-227ENST00000508502 A0A0D9SFI3 127 aa11.69□□□□□ -0.54
SEC31A-227ENST00000508502 ME3Q16798 604 aa11.69□□□□□ -0.54
SEC31A-227ENST00000508502 METTL22Q9BUU2 404 aaPredicted RBP11.69□□□□□ -0.54
SEC31A-227ENST00000508502 C1orf167Q5SNV9 1468 aa11.69□□□□□ -0.54
SEC31A-227ENST00000508502 SLC27A2O14975 620 aa11.69□□□□□ -0.54
SEC31A-227ENST00000508502 CSB-PGBD3P0DP91 1061 aa11.69□□□□□ -0.54
SEC31A-227ENST00000508502 UBE2HP62256 183 aa11.69□□□□□ -0.54
SEC31A-227ENST00000508502 CCDC183Q5T5S1 534 aa11.69□□□□□ -0.54
SEC31A-227ENST00000508502 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.69□□□□□ -0.54
SEC31A-227ENST00000508502 VPS37CA5D8V6 355 aaPredicted RBP11.68□□□□□ -0.54
SEC31A-227ENST00000508502 ANKRD13DQ6ZTN6 518 aa11.68□□□□□ -0.54
SEC31A-227ENST00000508502 DDX17Q92841 729 aaKnown RBP11.68□□□□□ -0.54
SEC31A-227ENST00000508502 C19orf44Q9H6X5 657 aa11.68□□□□□ -0.54
SEC31A-227ENST00000508502 CCDC39Q9UFE4 941 aa11.68□□□□□ -0.54
SEC31A-227ENST00000508502 MTMR6Q9Y217 621 aa11.68□□□□□ -0.54
SEC31A-227ENST00000508502 USP16Q9Y5T5 823 aa11.68□□□□□ -0.54
SEC31A-227ENST00000508502 OFD1O75665 1012 aa11.68□□□□□ -0.54
SEC31A-227ENST00000508502 ST3GAL1Q11201 340 aa11.68□□□□□ -0.54
SEC31A-227ENST00000508502 TTC5Q8N0Z6 440 aa11.68□□□□□ -0.54
SEC31A-227ENST00000508502 TPCN1Q9ULQ1 816 aa11.68□□□□□ -0.54
SEC31A-227ENST00000508502 ADAMTS7Q9UKP4 1686 aa11.68□□□□□ -0.54
SEC31A-227ENST00000508502 PSMA5P28066 241 aa11.68□□□□□ -0.54
SEC31A-227ENST00000508502 DNM1Q05193 864 aaKnown RBP11.68□□□□□ -0.54
SEC31A-227ENST00000508502 COL9A3Q14050 684 aaPredicted RBP11.68□□□□□ -0.54
SEC31A-227ENST00000508502 IFNL2Q8IZJ0 200 aa11.68□□□□□ -0.54
SEC31A-227ENST00000508502 ZKSCAN5Q9Y2L8 839 aa11.68□□□□□ -0.54
SEC31A-227ENST00000508502 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
SEC31A-227ENST00000508502 LMTK3Q96Q04 1460 aa11.67□□□□□ -0.54
SEC31A-227ENST00000508502 C5P01031 1676 aa11.67□□□□□ -0.54
SEC31A-227ENST00000508502 SNRPA1P09661 255 aaKnown RBP11.67□□□□□ -0.54
SEC31A-227ENST00000508502 RNF20Q5VTR2 975 aa11.67□□□□□ -0.54
SEC31A-227ENST00000508502 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.67□□□□□ -0.54
SEC31A-227ENST00000508502 TCEANC2Q96MN5 208 aa11.67□□□□□ -0.54
SEC31A-227ENST00000508502 PTMAP06454 111 aaKnown RBP11.67□□□□□ -0.54
SEC31A-227ENST00000508502 BLOC1S2Q6QNY1 142 aa11.67□□□□□ -0.54
SEC31A-227ENST00000508502 ZNF500O60304 480 aaPredicted RBP11.66□□□□□ -0.54
SEC31A-227ENST00000508502 UBE3BQ7Z3V4 1068 aa11.66□□□□□ -0.54
SEC31A-227ENST00000508502 ZNF589Q86UQ0 364 aaPredicted RBP11.66□□□□□ -0.54
SEC31A-227ENST00000508502 CABLES1Q8TDN4 633 aa11.66□□□□□ -0.54
SEC31A-227ENST00000508502 SNRKQ9NRH2 765 aa11.66□□□□□ -0.54
SEC31A-227ENST00000508502 TAF6LQ9Y6J9 622 aa11.66□□□□□ -0.54
SEC31A-227ENST00000508502 MEGF6O75095 1541 aa11.66□□□□□ -0.54
SEC31A-227ENST00000508502 CSPP1Q1MSJ5 1256 aa11.66□□□□□ -0.54
SEC31A-227ENST00000508502 ATP5J2-PTCD1G3V325 749 aa11.66□□□□□ -0.54
SEC31A-227ENST00000508502 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
SEC31A-227ENST00000508502 LETM1O95202 739 aaPredicted RBP11.66□□□□□ -0.54
SEC31A-227ENST00000508502 CHRNA2Q15822 529 aa11.66□□□□□ -0.54
SEC31A-227ENST00000508502 LARP1BQ659C4 914 aaKnown RBP11.66□□□□□ -0.54
SEC31A-227ENST00000508502 FAM184AQ8NB25 1140 aa11.66□□□□□ -0.54
SEC31A-227ENST00000508502 SCN11AQ9UI33 1791 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 TFCP2Q12800 502 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 COPRSQ9NQ92 184 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.65□□□□□ -0.542e-13■■□□□ 13.3
SEC31A-227ENST00000508502 DBNLQ9UJU6 430 aaKnown RBP11.65□□□□□ -0.54
SEC31A-227ENST00000508502 MED23Q9ULK4 1368 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 KIF1AQ12756 1690 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 CYP27B1O15528 508 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 ATF3P18847 181 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 LRP10Q7Z4F1 713 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 DCAF5Q96JK2 942 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 FMNL2Q96PY5 1086 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 TPM2P07951 284 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 PTPN12Q05209 780 aaKnown RBP11.65□□□□□ -0.54
SEC31A-227ENST00000508502 TNNI3KQ59H18 835 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 NDUFB9Q9Y6M9 179 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 FPGT-TNNI3KV9GXZ4 949 aa11.65□□□□□ -0.54
SEC31A-227ENST00000508502 HCLS1P14317 486 aaPredicted RBP11.64□□□□□ -0.55
SEC31A-227ENST00000508502 RPS6KB1P23443 525 aa11.64□□□□□ -0.55
SEC31A-227ENST00000508502 MCM5P33992 734 aa11.64□□□□□ -0.55
SEC31A-227ENST00000508502 RFX5P48382 616 aaPredicted RBP11.64□□□□□ -0.55
SEC31A-227ENST00000508502 ANKRD1Q15327 319 aa11.64□□□□□ -0.55
SEC31A-227ENST00000508502 A0A087WZG4 1122 aa11.64□□□□□ -0.55
SEC31A-227ENST00000508502 ATP5JP18859 108 aa11.64□□□□□ -0.55
SEC31A-227ENST00000508502 UVSSAQ2YD98 709 aa11.64□□□□□ -0.55
SEC31A-227ENST00000508502 FERMT3Q86UX7 667 aa11.64□□□□□ -0.55
SEC31A-227ENST00000508502 TAF5LO75529 589 aa11.64□□□□□ -0.55
SEC31A-227ENST00000508502 CABP4P57796 275 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms