RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CHUKO15111 745 aa12.6□□□□□ -0.39
PDLIM5-210ENST00000508216 RTN3O95197 1032 aaPredicted RBP12.6□□□□□ -0.39
PDLIM5-210ENST00000508216 CDCA2Q69YH5 1023 aaPredicted RBP12.6□□□□□ -0.39
PDLIM5-210ENST00000508216 KCNV1Q6PIU1 500 aa12.6□□□□□ -0.39
PDLIM5-210ENST00000508216 FILIP1Q7Z7B0 1213 aa12.6□□□□□ -0.39
PDLIM5-210ENST00000508216 RMDN2Q96LZ7 410 aa12.6□□□□□ -0.39
PDLIM5-210ENST00000508216 TRIM7Q9C029 511 aa12.6□□□□□ -0.39
PDLIM5-210ENST00000508216 LMCD1Q9NZU5 365 aa12.6□□□□□ -0.39
PDLIM5-210ENST00000508216 BCORL1Q5H9F3 1711 aa12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 MCTP1Q6DN14 999 aa12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 SAMD3Q8N6K7 520 aa12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 KCNV2Q8TDN2 545 aa12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 HDAC7Q8WUI4 952 aa12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 CLUAP1Q96AJ1 413 aa12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 CDCA7LQ96GN5 454 aa12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 POLR3CQ9BUI4 534 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 IRX2Q9BZI1 471 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 OCEL1Q9H607 264 aa12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 BATF3Q9NR55 127 aa12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 PARD3Q8TEW0 1356 aa12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 CAMSAP2Q08AD1 1489 aa12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 NESP48681 1621 aa12.59□□□□□ -0.39
PDLIM5-210ENST00000508216 ERLIN2O94905 339 aa12.58□□□□□ -0.39
PDLIM5-210ENST00000508216 FAM200BP0CF97 657 aa12.58□□□□□ -0.39
PDLIM5-210ENST00000508216 PSMC1P62191 440 aaKnown RBP12.58□□□□□ -0.39
PDLIM5-210ENST00000508216 DEUP1Q05D60 604 aa12.58□□□□□ -0.39
PDLIM5-210ENST00000508216 ELF2Q15723 593 aa12.58□□□□□ -0.39
PDLIM5-210ENST00000508216 PUS10Q3MIT2 529 aaKnown RBP12.58□□□□□ -0.39
PDLIM5-210ENST00000508216 TMCO3Q6UWJ1 677 aa12.58□□□□□ -0.39
PDLIM5-210ENST00000508216 MAB21L3Q8N8X9 362 aa12.58□□□□□ -0.39
PDLIM5-210ENST00000508216 MS4A4AQ96JQ5 239 aa12.58□□□□□ -0.39
PDLIM5-210ENST00000508216 ADAM21Q9UKJ8 722 aa12.58□□□□□ -0.39
PDLIM5-210ENST00000508216 OAS2P29728 719 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-210ENST00000508216 SCRN1Q12765 414 aa12.58□□□□□ -0.4
PDLIM5-210ENST00000508216 NAA30Q147X3 362 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-210ENST00000508216 IQCB1Q15051 598 aa12.58□□□□□ -0.4
PDLIM5-210ENST00000508216 SPATA21Q7Z572 469 aa12.58□□□□□ -0.4
PDLIM5-210ENST00000508216 PRPF38AQ8NAV1 312 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-210ENST00000508216 N4BP2L2Q92802 583 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-210ENST00000508216 EPB41L2O43491 1005 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-210ENST00000508216 PPFIA4O75335 1185 aa12.57□□□□□ -0.4
PDLIM5-210ENST00000508216 IFT88Q13099 833 aa12.57□□□□□ -0.4
PDLIM5-210ENST00000508216 ACBD5Q5T8D3 534 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-210ENST00000508216 NYAP1Q6ZVC0 841 aa12.57□□□□□ -0.4
PDLIM5-210ENST00000508216 MYLK4Q86YV6 388 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-210ENST00000508216 WDR63Q8IWG1 891 aa12.57□□□□□ -0.4
PDLIM5-210ENST00000508216 FAM163AQ96GL9 167 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-210ENST00000508216 GAPVD1Q14C86 1478 aa12.57□□□□□ -0.4
PDLIM5-210ENST00000508216 ZNF521Q96K83 1311 aa12.57□□□□□ -0.4
PDLIM5-210ENST00000508216 PRDM15P57071 1507 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 TRPC1P48995 793 aa12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 DUSP27Q5VZP5 1158 aa12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 CEP135Q66GS9 1140 aa12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 CPLX2Q6PUV4 134 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 GET4Q7L5D6 327 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 MAGEC3Q8TD91 643 aa12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 SMCR8Q8TEV9 937 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 METRNQ9UJH8 293 aa12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 AP1G2O75843 785 aa12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 FMNL1O95466 1100 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 TRIM42Q8IWZ5 723 aa12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 CABS1Q96KC9 395 aa12.56□□□□□ -0.4
PDLIM5-210ENST00000508216 TEX14Q8IWB6 1497 aa12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 CUX1P39880 1505 aa12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 IPO5O00410 1097 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 SASH1O94885 1247 aa12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 PLCG2P16885 1265 aa12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 SMC1AQ14683 1233 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 PDCD7Q8N8D1 485 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 TBC1D5Q92609 795 aa12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 KAT2BQ92831 832 aa12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 TEKT1Q969V4 418 aa12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 PDRG1Q9NUG6 133 aa12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 EXOC6BQ9Y2D4 811 aa12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 FMN1Q68DA7 1419 aa12.55□□□□□ -0.4
PDLIM5-210ENST00000508216 AHCYL1O43865 530 aa12.54□□□□□ -0.4
PDLIM5-210ENST00000508216 NEMFO60524 1076 aa12.54□□□□□ -0.4
PDLIM5-210ENST00000508216 CCDC15Q0P6D6 951 aa12.54□□□□□ -0.4
PDLIM5-210ENST00000508216 G3BP1Q13283 466 aaKnown RBP eCLIP12.54□□□□□ -0.4
PDLIM5-210ENST00000508216 MFN1Q8IWA4 741 aa12.54□□□□□ -0.4
PDLIM5-210ENST00000508216 TRMT2AQ8IZ69 625 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-210ENST00000508216 MIPOL1Q8TD10 442 aa12.54□□□□□ -0.4
PDLIM5-210ENST00000508216 ODF2LQ9ULJ1 636 aa12.54□□□□□ -0.4
PDLIM5-210ENST00000508216 ZNF608Q9ULD9 1512 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-210ENST00000508216 OPA1O60313 960 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 VDRP11473 427 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 LMAN1P49257 510 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 BRAPQ7Z569 592 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 AMOTL1Q8IY63 956 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 C3orf20Q8ND61 904 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 RTF1Q92541 710 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 SAAL1Q96ER3 474 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 BICD1Q96G01 975 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 CCDC34Q96HJ3 373 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 WIZO95785 1651 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 SYNMO15061 1565 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 KDM5CP41229 1560 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms