RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 CSB-PGBD3P0DP91 1061 aa13.14□□□□□ -0.31
LIN54-207ENST00000508171 RNF214Q8ND24 703 aa13.14□□□□□ -0.31
LIN54-207ENST00000508171 PDRG1Q9NUG6 133 aa13.14□□□□□ -0.31
LIN54-207ENST00000508171 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
LIN54-207ENST00000508171 STX6O43752 255 aa13.13□□□□□ -0.31
LIN54-207ENST00000508171 ANKRD13DQ6ZTN6 518 aa13.13□□□□□ -0.31
LIN54-207ENST00000508171 CCDC83Q8IWF9 413 aa13.13□□□□□ -0.31
LIN54-207ENST00000508171 METTL22Q9BUU2 404 aaPredicted RBP13.13□□□□□ -0.31
LIN54-207ENST00000508171 ZSWIM6Q9HCJ5 1215 aa13.13□□□□□ -0.31
LIN54-207ENST00000508171 RBM8AQ9Y5S9 174 aaKnown RBP13.13□□□□□ -0.31
LIN54-207ENST00000508171 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
LIN54-207ENST00000508171 A0A0D9SFI3 127 aa13.13□□□□□ -0.31
LIN54-207ENST00000508171 CYP27B1O15528 508 aa13.13□□□□□ -0.31
LIN54-207ENST00000508171 ZSCAN22P10073 491 aaPredicted RBP13.13□□□□□ -0.31
LIN54-207ENST00000508171 LRP10Q7Z4F1 713 aa13.13□□□□□ -0.31
LIN54-207ENST00000508171 IFNL2Q8IZJ0 200 aa13.13□□□□□ -0.31
LIN54-207ENST00000508171 EDC3Q96F86 508 aaKnown RBP13.13□□□□□ -0.31
LIN54-207ENST00000508171 SMC3Q9UQE7 1217 aa13.13□□□□□ -0.31
LIN54-207ENST00000508171 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.13□□□□□ -0.31
LIN54-207ENST00000508171 ATF3P18847 181 aa13.12□□□□□ -0.31
LIN54-207ENST00000508171 VPS53Q5VIR6 699 aa13.12□□□□□ -0.31
LIN54-207ENST00000508171 CREB3L3Q68CJ9 461 aa13.12□□□□□ -0.31
LIN54-207ENST00000508171 MAP4K1Q92918 833 aa13.12□□□□□ -0.31
LIN54-207ENST00000508171 KCNB2Q92953 911 aa13.12□□□□□ -0.31
LIN54-207ENST00000508171 PDLIM2Q96JY6 352 aa13.12□□□□□ -0.31
LIN54-207ENST00000508171 CYP46A1Q9Y6A2 500 aa13.12□□□□□ -0.31
LIN54-207ENST00000508171 ATP5J2-PTCD1G3V325 749 aa13.12□□□□□ -0.31
LIN54-207ENST00000508171 PTCD1O75127 700 aaKnown RBP13.12□□□□□ -0.31
LIN54-207ENST00000508171 KCNJ4P48050 445 aa13.12□□□□□ -0.31
LIN54-207ENST00000508171 GJB2P29033 226 aa13.11□□□□□ -0.31
LIN54-207ENST00000508171 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
LIN54-207ENST00000508171 ME3Q16798 604 aa13.11□□□□□ -0.31
LIN54-207ENST00000508171 ZSCAN30Q86W11 494 aa13.11□□□□□ -0.31
LIN54-207ENST00000508171 NECAB1Q8N987 351 aa13.11□□□□□ -0.31
LIN54-207ENST00000508171 TAF6LQ9Y6J9 622 aa13.11□□□□□ -0.31
LIN54-207ENST00000508171 NDUFB9Q9Y6M9 179 aa13.11□□□□□ -0.31
LIN54-207ENST00000508171 KIF1AQ12756 1690 aa13.11□□□□□ -0.31
LIN54-207ENST00000508171 SNRPA1P09661 255 aaKnown RBP13.11□□□□□ -0.31
LIN54-207ENST00000508171 TTC5Q8N0Z6 440 aa13.11□□□□□ -0.31
LIN54-207ENST00000508171 TCEANC2Q96MN5 208 aa13.11□□□□□ -0.31
LIN54-207ENST00000508171 FSD1Q9BTV5 496 aa13.11□□□□□ -0.31
LIN54-207ENST00000508171 TM6SF1Q9BZW5 370 aa13.11□□□□□ -0.31
LIN54-207ENST00000508171 ZKSCAN1P17029 563 aaPredicted RBP13.1□□□□□ -0.31
LIN54-207ENST00000508171 UBE3BQ7Z3V4 1068 aa13.1□□□□□ -0.31
LIN54-207ENST00000508171 COL18A1P39060 1754 aa13.1□□□□□ -0.31
LIN54-207ENST00000508171 SLC27A2O14975 620 aa13.1□□□□□ -0.31
LIN54-207ENST00000508171 F13A1P00488 732 aa13.1□□□□□ -0.31
LIN54-207ENST00000508171 ZNF589Q86UQ0 364 aaPredicted RBP13.1□□□□□ -0.31
LIN54-207ENST00000508171 DCAF5Q96JK2 942 aa13.1□□□□□ -0.31
LIN54-207ENST00000508171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.1□□□□□ -0.315e-8■□□□□ 10.8
LIN54-207ENST00000508171 TPCN1Q9ULQ1 816 aa13.1□□□□□ -0.31
LIN54-207ENST00000508171 MST1RQ04912 1400 aa13.1□□□□□ -0.31
LIN54-207ENST00000508171 TMEM94Q12767 1356 aa13.1□□□□□ -0.31
LIN54-207ENST00000508171 CHGBP05060 677 aa13.09□□□□□ -0.31
LIN54-207ENST00000508171 LMTK3Q96Q04 1460 aa13.09□□□□□ -0.31
LIN54-207ENST00000508171 RFX5P48382 616 aaPredicted RBP13.09□□□□□ -0.31
LIN54-207ENST00000508171 PTPN12Q05209 780 aaKnown RBP13.09□□□□□ -0.31
LIN54-207ENST00000508171 TFCP2Q12800 502 aa13.09□□□□□ -0.31
LIN54-207ENST00000508171 TSPY26PQ9H489 355 aa13.09□□□□□ -0.31
LIN54-207ENST00000508171 AFDNP55196 1824 aaKnown RBP13.09□□□□□ -0.31
LIN54-207ENST00000508171 HIP1O00291 1037 aa13.08□□□□□ -0.31
LIN54-207ENST00000508171 SYAP1Q96A49 352 aaPredicted RBP13.08□□□□□ -0.31
LIN54-207ENST00000508171 FMNL2Q96PY5 1086 aa13.08□□□□□ -0.31
LIN54-207ENST00000508171 COPRSQ9NQ92 184 aa13.08□□□□□ -0.31
LIN54-207ENST00000508171 DBNLQ9UJU6 430 aaKnown RBP13.08□□□□□ -0.31
LIN54-207ENST00000508171 A0A087WZG4 1122 aa13.08□□□□□ -0.32
LIN54-207ENST00000508171 FIBPO43427 364 aa13.08□□□□□ -0.32
LIN54-207ENST00000508171 CABP4P57796 275 aa13.08□□□□□ -0.32
LIN54-207ENST00000508171 TMEM87AQ8NBN3 555 aa13.08□□□□□ -0.32
LIN54-207ENST00000508171 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.08□□□□□ -0.32
LIN54-207ENST00000508171 MTMR6Q9Y217 621 aa13.08□□□□□ -0.32
LIN54-207ENST00000508171 MSNP26038 577 aaKnown RBP13.07□□□□□ -0.32
LIN54-207ENST00000508171 DNM1Q05193 864 aaKnown RBP13.07□□□□□ -0.32
LIN54-207ENST00000508171 ZSCAN31Q96LW9 406 aaPredicted RBP13.07□□□□□ -0.32
LIN54-207ENST00000508171 SH2B1Q9NRF2 756 aaPredicted RBP13.07□□□□□ -0.32
LIN54-207ENST00000508171 SNRKQ9NRH2 765 aa13.07□□□□□ -0.32
LIN54-207ENST00000508171 TNNI3KQ59H18 835 aa13.07□□□□□ -0.32
LIN54-207ENST00000508171 FPGT-TNNI3KV9GXZ4 949 aa13.07□□□□□ -0.32
LIN54-207ENST00000508171 STRCP1A6NGW2 1772 aa13.06□□□□□ -0.32
LIN54-207ENST00000508171 CCDC9Q9Y3X0 531 aaKnown RBP13.06□□□□□ -0.32
LIN54-207ENST00000508171 VPS37CA5D8V6 355 aaPredicted RBP13.06□□□□□ -0.32
LIN54-207ENST00000508171 COL15A1P39059 1388 aa13.06□□□□□ -0.32
LIN54-207ENST00000508171 MED23Q9ULK4 1368 aa13.06□□□□□ -0.32
LIN54-207ENST00000508171 NBPF26B4DH59 902 aa13.06□□□□□ -0.32
LIN54-207ENST00000508171 TAF5LO75529 589 aa13.06□□□□□ -0.32
LIN54-207ENST00000508171 UBE2HP62256 183 aa13.06□□□□□ -0.32
LIN54-207ENST00000508171 RABL6Q3YEC7 729 aaPredicted RBP13.06□□□□□ -0.32
LIN54-207ENST00000508171 NBPF14Q5TI25 921 aa13.06□□□□□ -0.32
LIN54-207ENST00000508171 NBPF10Q6P3W6 841 aaKnown RBP13.06□□□□□ -0.32
LIN54-207ENST00000508171 NBPF15Q8N660 670 aa13.06□□□□□ -0.32
LIN54-207ENST00000508171 SEC62Q99442 399 aaKnown RBP13.06□□□□□ -0.32
LIN54-207ENST00000508171 DBNDD2Q9BQY9 259 aa13.06□□□□□ -0.32
LIN54-207ENST00000508171 NOL7Q9UMY1 257 aaKnown RBP13.06□□□□□ -0.32
LIN54-207ENST00000508171 ARFGEF2Q9Y6D5 1785 aa13.05□□□□□ -0.32
LIN54-207ENST00000508171 ATP5JP18859 108 aa13.05□□□□□ -0.32
LIN54-207ENST00000508171 PSMA5P28066 241 aa13.05□□□□□ -0.32
LIN54-207ENST00000508171 HS1BP3Q53T59 392 aa13.05□□□□□ -0.32
LIN54-207ENST00000508171 BLOC1S2Q6QNY1 142 aa13.05□□□□□ -0.32
LIN54-207ENST00000508171 CASP7P55210 303 aa13.05□□□□□ -0.32
LIN54-207ENST00000508171 LARP1BQ659C4 914 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms