RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 RIC1Q4ADV7 1423 aa27.17■■□□□ 1.94
CLDND1-216ENST00000507944 DDNO94850 711 aaPredicted RBP27.17■■□□□ 1.94
CLDND1-216ENST00000507944 HOXA10P31260 410 aaPredicted RBP27.17■■□□□ 1.94
CLDND1-216ENST00000507944 XAGE3Q8WTP9 111 aa27.17■■□□□ 1.94
CLDND1-216ENST00000507944 DDX21Q9NR30 783 aaKnown RBP eCLIP27.17■■□□□ 1.94
CLDND1-216ENST00000507944 UTP14AQ9BVJ6 771 aaKnown RBP27.16■■□□□ 1.94
CLDND1-216ENST00000507944 HTRA3P83110 453 aa27.15■■□□□ 1.94
CLDND1-216ENST00000507944 SYNE4Q8N205 404 aa27.15■■□□□ 1.94
CLDND1-216ENST00000507944 CFAP44Q96MT7 982 aa27.15■■□□□ 1.94
CLDND1-216ENST00000507944 HSP90AB3PQ58FF7 597 aa27.14■■□□□ 1.94
CLDND1-216ENST00000507944 CC2D2BQ6DHV5 1058 aa27.14■■□□□ 1.94
CLDND1-216ENST00000507944 RBM17Q96I25 401 aaKnown RBP27.14■■□□□ 1.94
CLDND1-216ENST00000507944 CRAMP1Q96RY5 1269 aa27.14■■□□□ 1.94
CLDND1-216ENST00000507944 APAF1O14727 1248 aa27.13■■□□□ 1.93
CLDND1-216ENST00000507944 SLC10A5Q5PT55 438 aa27.13■■□□□ 1.93
CLDND1-216ENST00000507944 NLRP3Q96P20 1036 aa27.13■■□□□ 1.93
CLDND1-216ENST00000507944 CHPF2Q9P2E5 772 aa27.13■■□□□ 1.93
CLDND1-216ENST00000507944 HOXB7P09629 217 aa27.12■■□□□ 1.93
CLDND1-216ENST00000507944 HDGFL1Q5TGJ6 251 aa27.12■■□□□ 1.93
CLDND1-216ENST00000507944 C3orf67Q6ZVT6 689 aa27.12■■□□□ 1.93
CLDND1-216ENST00000507944 IARSP41252 1262 aaKnown RBP27.11■■□□□ 1.93
CLDND1-216ENST00000507944 TCIRG1Q13488 830 aa27.11■■□□□ 1.93
CLDND1-216ENST00000507944 PSMD1Q99460 953 aa27.11■■□□□ 1.93
CLDND1-216ENST00000507944 NLRP10Q86W26 655 aa27.1■■□□□ 1.93
CLDND1-216ENST00000507944 MBIPQ9NS73 344 aa27.1■■□□□ 1.93
CLDND1-216ENST00000507944 DUSP27Q5VZP5 1158 aa27.09■■□□□ 1.93
CLDND1-216ENST00000507944 RNF123Q5XPI4 1314 aa27.09■■□□□ 1.93
CLDND1-216ENST00000507944 SNED1Q8TER0 1413 aa27.08■■□□□ 1.93
CLDND1-216ENST00000507944 ANKRD36CQ5JPF3 1778 aa27.08■■□□□ 1.93
CLDND1-216ENST00000507944 ZNF853P0CG23 659 aa27.08■■□□□ 1.93
CLDND1-216ENST00000507944 GRIPAP1Q4V328 841 aa27.08■■□□□ 1.93
CLDND1-216ENST00000507944 KLRG1Q96E93 195 aa27.08■■□□□ 1.93
CLDND1-216ENST00000507944 L3MBTL3Q96JM7 780 aaPredicted RBP27.08■■□□□ 1.93
CLDND1-216ENST00000507944 DBF4Q9UBU7 674 aaPredicted RBP27.08■■□□□ 1.93
CLDND1-216ENST00000507944 IQCA1LA6NCM1 817 aa27.07■■□□□ 1.92
CLDND1-216ENST00000507944 TCERG1O14776 1098 aaKnown RBP27.07■■□□□ 1.92
CLDND1-216ENST00000507944 PPEF1O14829 653 aaPredicted RBP27.07■■□□□ 1.92
CLDND1-216ENST00000507944 ZNF541Q9H0D2 1346 aa27.07■■□□□ 1.92
CLDND1-216ENST00000507944 FZD9O00144 591 aa27.06■■□□□ 1.92
CLDND1-216ENST00000507944 CALD1Q05682 793 aaKnown RBP27.06■■□□□ 1.92
CLDND1-216ENST00000507944 PLBD2Q8NHP8 589 aa27.06■■□□□ 1.92
CLDND1-216ENST00000507944 JDP2Q8WYK2 163 aa27.06■■□□□ 1.92
CLDND1-216ENST00000507944 IFT57Q9NWB7 429 aa27.06■■□□□ 1.92
CLDND1-216ENST00000507944 TRMT112Q9UI30 125 aaKnown RBP27.06■■□□□ 1.92
CLDND1-216ENST00000507944 HCLS1P14317 486 aaPredicted RBP27.05■■□□□ 1.92
CLDND1-216ENST00000507944 CHADLQ6NUI6 762 aa27.05■■□□□ 1.92
CLDND1-216ENST00000507944 ANKRD13DQ6ZTN6 518 aa27.05■■□□□ 1.92
CLDND1-216ENST00000507944 HYPKQ9NX55 129 aa27.05■■□□□ 1.92
CLDND1-216ENST00000507944 SCN4AP35499 1836 aa27.04■■□□□ 1.92
CLDND1-216ENST00000507944 POTEIP0CG38 1075 aa27.04■■□□□ 1.92
CLDND1-216ENST00000507944 POTEJP0CG39 1038 aa27.04■■□□□ 1.92
CLDND1-216ENST00000507944 ZEB1P37275 1124 aaPredicted RBP27.04■■□□□ 1.92
CLDND1-216ENST00000507944 GNAI1P63096 354 aa27.04■■□□□ 1.92
CLDND1-216ENST00000507944 TMX4Q9H1E5 349 aaPredicted RBP27.04■■□□□ 1.92
CLDND1-216ENST00000507944 SLC51AQ86UW1 340 aa27.03■■□□□ 1.92
CLDND1-216ENST00000507944 SH3TC1Q8TE82 1336 aa27.03■■□□□ 1.92
CLDND1-216ENST00000507944 TAF1DQ9H5J8 278 aaPredicted RBP27.03■■□□□ 1.92
CLDND1-216ENST00000507944 ATP6V0A2Q9Y487 856 aa27.02■■□□□ 1.92
CLDND1-216ENST00000507944 ABCC4O15439 1325 aa27.01■■□□□ 1.91
CLDND1-216ENST00000507944 CCDC184Q52MB2 194 aa27.01■■□□□ 1.91
CLDND1-216ENST00000507944 HACL1Q9UJ83 578 aa27.01■■□□□ 1.91
CLDND1-216ENST00000507944 ELL2O00472 640 aaPredicted RBP27■■□□□ 1.91
CLDND1-216ENST00000507944 BBOX1O75936 387 aa27■■□□□ 1.91
CLDND1-216ENST00000507944 GPC2Q8N158 579 aa27■■□□□ 1.91
CLDND1-216ENST00000507944 LARGE2Q8N3Y3 721 aa27■■□□□ 1.91
CLDND1-216ENST00000507944 ZNF428Q96B54 188 aa27■■□□□ 1.91
CLDND1-216ENST00000507944 ISCA1Q9BUE6 129 aa27■■□□□ 1.91
CLDND1-216ENST00000507944 EIF6P56537 245 aaKnown RBP26.99■■□□□ 1.91
CLDND1-216ENST00000507944 LDHDQ86WU2 507 aa26.99■■□□□ 1.91
CLDND1-216ENST00000507944 JMYQ8N9B5 988 aa26.99■■□□□ 1.91
CLDND1-216ENST00000507944 LAMB2P55268 1798 aa26.99■■□□□ 1.91
CLDND1-216ENST00000507944 ATP5J2-PTCD1G3V325 749 aa26.98■■□□□ 1.91
CLDND1-216ENST00000507944 DDX46Q7L014 1031 aaKnown RBP26.98■■□□□ 1.91
CLDND1-216ENST00000507944 EPHX2P34913 555 aa26.97■■□□□ 1.91
CLDND1-216ENST00000507944 EAPPQ56P03 285 aaPredicted RBP26.97■■□□□ 1.91
CLDND1-216ENST00000507944 SP8Q8IXZ3 490 aa26.97■■□□□ 1.91
CLDND1-216ENST00000507944 COL4A5P29400 1685 aa26.96■■□□□ 1.91
CLDND1-216ENST00000507944 GJA3Q9Y6H8 435 aa26.96■■□□□ 1.91
CLDND1-216ENST00000507944 PPIP5K2O43314 1243 aa26.95■■□□□ 1.9
CLDND1-216ENST00000507944 GRAPQ13588 217 aa26.95■■□□□ 1.9
CLDND1-216ENST00000507944 C8orf58Q8NAV2 365 aa26.95■■□□□ 1.9
CLDND1-216ENST00000507944 GRAPLQ8TC17 118 aaPredicted RBP26.95■■□□□ 1.9
CLDND1-216ENST00000507944 FAM89AQ96GI7 184 aa26.95■■□□□ 1.9
CLDND1-216ENST00000507944 VPS33BQ9H267 617 aa26.95■■□□□ 1.9
CLDND1-216ENST00000507944 TRIM28Q13263 835 aaKnown RBP26.94■■□□□ 1.9
CLDND1-216ENST00000507944 RIC3Q7Z5B4 369 aa26.94■■□□□ 1.9
CLDND1-216ENST00000507944 NIM1KQ8IY84 436 aa26.94■■□□□ 1.9
CLDND1-216ENST00000507944 SUPT20HQ8NEM7 779 aa26.94■■□□□ 1.9
CLDND1-216ENST00000507944 PHAXQ9H814 394 aaKnown RBP26.94■■□□□ 1.9
CLDND1-216ENST00000507944 CLEC11AQ9Y240 323 aa26.94■■□□□ 1.9
CLDND1-216ENST00000507944 TAF1P21675 1872 aa26.93■■□□□ 1.9
CLDND1-216ENST00000507944 GOLGA2Q08379 1002 aa26.93■■□□□ 1.9
CLDND1-216ENST00000507944 AOC3Q16853 763 aa26.93■■□□□ 1.9
CLDND1-216ENST00000507944 PNMA8AQ86V59 439 aaPredicted RBP26.93■■□□□ 1.9
CLDND1-216ENST00000507944 MPNDQ8N594 471 aa26.93■■□□□ 1.9
CLDND1-216ENST00000507944 RTFDC1Q9BY42 306 aaPredicted RBP26.93■■□□□ 1.9
CLDND1-216ENST00000507944 DPP8Q6V1X1 898 aaPredicted RBP26.92■■□□□ 1.9
CLDND1-216ENST00000507944 CHMP4AQ9BY43 222 aa26.92■■□□□ 1.9
CLDND1-216ENST00000507944 SF3B3Q15393 1217 aaKnown RBP26.91■■□□□ 1.9
CLDND1-216ENST00000507944 RTL5Q5HYW3 569 aaPredicted RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms