RNA–Protein interactions for RNA: ENST00000507785.2

MSX2-202, Transcript of msh homeobox 2, humanhuman

TSL 2 BASIC

Gene MSX2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-202ENST00000507785 G2E3Q7L622 706 aa35.92■■■■□ 3.34
MSX2-202ENST00000507785 RIC3Q7Z5B4 369 aa35.92■■■■□ 3.34
MSX2-202ENST00000507785 UTP14AQ9BVJ6 771 aaKnown RBP35.92■■■■□ 3.34
MSX2-202ENST00000507785 TRMT2AQ8IZ69 625 aaKnown RBP35.91■■■■□ 3.34
MSX2-202ENST00000507785 TTLL6Q8N841 843 aa35.9■■■■□ 3.34
MSX2-202ENST00000507785 RNF123Q5XPI4 1314 aa35.89■■■■□ 3.34
MSX2-202ENST00000507785 CACNA1SQ13698 1873 aa35.89■■■■□ 3.34
MSX2-202ENST00000507785 DDX58O95786 925 aaKnown RBP35.89■■■■□ 3.34
MSX2-202ENST00000507785 TRIM28Q13263 835 aaKnown RBP35.89■■■■□ 3.34
MSX2-202ENST00000507785 STYK1Q6J9G0 422 aa35.89■■■■□ 3.34
MSX2-202ENST00000507785 ATP5J2-PTCD1G3V325 749 aa35.88■■■■□ 3.33
MSX2-202ENST00000507785 ZNF622Q969S3 477 aaKnown RBP eCLIP35.88■■■■□ 3.33
MSX2-202ENST00000507785 MASTLQ96GX5 879 aa35.88■■■■□ 3.33
MSX2-202ENST00000507785 ADCY9O60503 1353 aa35.88■■■■□ 3.33
MSX2-202ENST00000507785 SLX4Q8IY92 1834 aa35.87■■■■□ 3.33
MSX2-202ENST00000507785 YY1P25490 414 aa35.86■■■■□ 3.33
MSX2-202ENST00000507785 CRY2Q49AN0 593 aa35.86■■■■□ 3.33
MSX2-202ENST00000507785 SLC10A5Q5PT55 438 aa35.86■■■■□ 3.33
MSX2-202ENST00000507785 KSR2Q6VAB6 950 aa35.86■■■■□ 3.33
MSX2-202ENST00000507785 PI4KAP2A4QPH2 592 aa35.84■■■■□ 3.33
MSX2-202ENST00000507785 NPR1P16066 1061 aa35.84■■■■□ 3.33
MSX2-202ENST00000507785 FLIIQ13045 1269 aa35.84■■■■□ 3.33
MSX2-202ENST00000507785 PI4KAP1Q8N8J0 262 aa35.84■■■■□ 3.33
MSX2-202ENST00000507785 MYD88Q99836 296 aa35.84■■■■□ 3.33
MSX2-202ENST00000507785 METTL22Q9BUU2 404 aaPredicted RBP35.84■■■■□ 3.33
MSX2-202ENST00000507785 MAP3K2Q9Y2U5 619 aa35.84■■■■□ 3.33
MSX2-202ENST00000507785 CNKSR1Q969H4 720 aa35.83■■■■□ 3.33
MSX2-202ENST00000507785 TRMT112Q9UI30 125 aaKnown RBP35.83■■■■□ 3.33
MSX2-202ENST00000507785 LAMB2P55268 1798 aa35.83■■■■□ 3.33
MSX2-202ENST00000507785 SYNE4Q8N205 404 aa35.82■■■■□ 3.32
MSX2-202ENST00000507785 SH3TC1Q8TE82 1336 aa35.82■■■■□ 3.32
MSX2-202ENST00000507785 DDX60Q8IY21 1712 aaKnown RBP35.81■■■■□ 3.32
MSX2-202ENST00000507785 C3orf67Q6ZVT6 689 aa35.81■■■■□ 3.32
MSX2-202ENST00000507785 ZNF428Q96B54 188 aa35.81■■■■□ 3.32
MSX2-202ENST00000507785 ARHGAP27Q6ZUM4 889 aa35.8■■■■□ 3.32
MSX2-202ENST00000507785 HNRNPUQ00839 825 aaKnown RBP eCLIP35.78■■■■□ 3.32
MSX2-202ENST00000507785 PRPF40BQ6NWY9 871 aaKnown RBP35.78■■■■□ 3.32
MSX2-202ENST00000507785 FKBP5Q13451 457 aaPredicted RBP35.77■■■■□ 3.32
MSX2-202ENST00000507785 CCDC191Q8NCU4 936 aa35.77■■■■□ 3.32
MSX2-202ENST00000507785 SBF1O95248 1867 aa35.77■■■■□ 3.32
MSX2-202ENST00000507785 IGKV5-2P06315 115 aa35.76■■■■□ 3.32
MSX2-202ENST00000507785 HCLS1P14317 486 aaPredicted RBP35.76■■■■□ 3.32
MSX2-202ENST00000507785 HOXA10P31260 410 aaPredicted RBP35.76■■■■□ 3.32
MSX2-202ENST00000507785 FAM89AQ96GI7 184 aa35.76■■■■□ 3.32
MSX2-202ENST00000507785 NLRP3Q96P20 1036 aa35.76■■■■□ 3.32
MSX2-202ENST00000507785 FER1L6Q2WGJ9 1857 aa35.75■■■■□ 3.31
MSX2-202ENST00000507785 C21orf2O43822 256 aa35.73■■■■□ 3.31
MSX2-202ENST00000507785 ZBTB38Q8NAP3 1195 aaPredicted RBP35.73■■■■□ 3.31
MSX2-202ENST00000507785 C7orf43Q8WVR3 580 aa35.73■■■■□ 3.31
MSX2-202ENST00000507785 CWC25Q9NXE8 425 aaPredicted RBP35.73■■■■□ 3.31
MSX2-202ENST00000507785 DNAAF4Q8WXU2 420 aa35.72■■■■□ 3.31
MSX2-202ENST00000507785 RPGRQ92834 1020 aaKnown RBP35.72■■■■□ 3.31
MSX2-202ENST00000507785 ALDH1B1P30837 517 aa35.71■■■■□ 3.31
MSX2-202ENST00000507785 NEXNQ0ZGT2 675 aa35.7■■■■□ 3.31
MSX2-202ENST00000507785 MRPL50Q8N5N7 158 aaKnown RBP35.7■■■■□ 3.31
MSX2-202ENST00000507785 ZNF219Q9P2Y4 722 aaPredicted RBP35.7■■■■□ 3.31
MSX2-202ENST00000507785 NEURL1BA8MQ27 555 aa35.69■■■■□ 3.3
MSX2-202ENST00000507785 PCCAP05165 728 aaPredicted RBP35.69■■■■□ 3.3
MSX2-202ENST00000507785 RTL5Q5HYW3 569 aaPredicted RBP35.69■■■■□ 3.3
MSX2-202ENST00000507785 SSH1Q8WYL5 1049 aa35.69■■■■□ 3.3
MSX2-202ENST00000507785 CRAMP1Q96RY5 1269 aa35.69■■■■□ 3.3
MSX2-202ENST00000507785 NFKBIEO00221 500 aa35.68■■■■□ 3.3
MSX2-202ENST00000507785 CT47B1P0C2W7 299 aaPredicted RBP35.68■■■■□ 3.3
MSX2-202ENST00000507785 CWF19L2Q2TBE0 894 aaKnown RBP35.68■■■■□ 3.3
MSX2-202ENST00000507785 RBM17Q96I25 401 aaKnown RBP35.68■■■■□ 3.3
MSX2-202ENST00000507785 CCDC88AQ3V6T2 1871 aa35.68■■■■□ 3.3
MSX2-202ENST00000507785 IRS4O14654 1257 aaPredicted RBP35.67■■■■□ 3.3
MSX2-202ENST00000507785 RASSF7Q02833 373 aa35.67■■■■□ 3.3
MSX2-202ENST00000507785 F6X3S4 739 aa35.66■■■■□ 3.3
MSX2-202ENST00000507785 TAF1P21675 1872 aa35.65■■■■□ 3.3
MSX2-202ENST00000507785 ALDH1L2Q3SY69 923 aa35.65■■■■□ 3.3
MSX2-202ENST00000507785 SOGA3Q5TF21 947 aa35.65■■■■□ 3.3
MSX2-202ENST00000507785 SF3B3Q15393 1217 aaKnown RBP35.64■■■■□ 3.3
MSX2-202ENST00000507785 LINS1Q8NG48 757 aa35.64■■■■□ 3.3
MSX2-202ENST00000507785 ZBED9Q6R2W3 1325 aa35.63■■■■□ 3.29
MSX2-202ENST00000507785 PRELPP51888 382 aa35.63■■■■□ 3.29
MSX2-202ENST00000507785 JARID2Q92833 1246 aaPredicted RBP35.63■■■■□ 3.29
MSX2-202ENST00000507785 ABCC4O15439 1325 aa35.62■■■■□ 3.29
MSX2-202ENST00000507785 C9orf131Q5VYM1 1079 aa35.62■■■■□ 3.29
MSX2-202ENST00000507785 OLFM4Q6UX06 510 aa35.62■■■■□ 3.29
MSX2-202ENST00000507785 ZNF784Q8NCA9 323 aaPredicted RBP35.62■■■■□ 3.29
MSX2-202ENST00000507785 SNED1Q8TER0 1413 aa35.62■■■■□ 3.29
MSX2-202ENST00000507785 CDHR2Q9BYE9 1310 aa35.61■■■■□ 3.29
MSX2-202ENST00000507785 GCKRQ14397 625 aa35.61■■■■□ 3.29
MSX2-202ENST00000507785 CCDC93Q567U6 631 aa35.61■■■■□ 3.29
MSX2-202ENST00000507785 BCL2L13Q9BXK5 485 aa35.61■■■■□ 3.29
MSX2-202ENST00000507785 LTBP3Q9NS15 1303 aa35.6■■■■□ 3.29
MSX2-202ENST00000507785 MYH3P11055 1940 aa35.6■■■■□ 3.29
MSX2-202ENST00000507785 BEND3Q5T5X7 828 aa35.6■■■■□ 3.29
MSX2-202ENST00000507785 HSP90B1P14625 803 aaKnown RBP35.59■■■■□ 3.29
MSX2-202ENST00000507785 DICER1Q9UPY3 1922 aaKnown RBP35.59■■■■□ 3.29
MSX2-202ENST00000507785 PTPRCP08575 1304 aa35.58■■■■□ 3.29
MSX2-202ENST00000507785 H7C1W4 665 aa35.58■■■■□ 3.29
MSX2-202ENST00000507785 PPEF1O14829 653 aaPredicted RBP35.57■■■■□ 3.28
MSX2-202ENST00000507785 DDX46Q7L014 1031 aaKnown RBP35.57■■■■□ 3.28
MSX2-202ENST00000507785 SMC4Q9NTJ3 1288 aa35.57■■■■□ 3.28
MSX2-202ENST00000507785 RNF181Q9P0P0 153 aa35.57■■■■□ 3.28
MSX2-202ENST00000507785 COL4A1P02462 1669 aa35.56■■■■□ 3.28
MSX2-202ENST00000507785 PDE8AO60658 829 aa35.56■■■■□ 3.28
MSX2-202ENST00000507785 LMNB1P20700 586 aa35.56■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms