RNA–Protein interactions for RNA: ENST00000506820.1

AFP-203, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-203ENST00000506820 IER5Q5VY09 327 aa6.75□□□□□ -1.33
AFP-203ENST00000506820 ZNF280CQ8ND82 737 aa6.75□□□□□ -1.33
AFP-203ENST00000506820 TNFRSF25Q93038 417 aa6.75□□□□□ -1.33
AFP-203ENST00000506820 ZMYND15Q9H091 742 aa6.75□□□□□ -1.33
AFP-203ENST00000506820 PCSK7Q16549 785 aa6.74□□□□□ -1.33
AFP-203ENST00000506820 CDCA8Q53HL2 280 aa6.74□□□□□ -1.33
AFP-203ENST00000506820 PRRT3Q5FWE3 981 aa6.74□□□□□ -1.33
AFP-203ENST00000506820 BHMTQ93088 406 aa6.74□□□□□ -1.33
AFP-203ENST00000506820 SLC30A3Q99726 388 aa6.74□□□□□ -1.33
AFP-203ENST00000506820 NOVA2Q9UNW9 492 aaKnown RBP6.74□□□□□ -1.33
AFP-203ENST00000506820 TGFBR3LH3BV60 316 aa6.73□□□□□ -1.33
AFP-203ENST00000506820 ARID4AP29374 1257 aaPredicted RBP6.73□□□□□ -1.33
AFP-203ENST00000506820 SWI5Q1ZZU3 235 aa6.73□□□□□ -1.33
AFP-203ENST00000506820 CCDC97Q96F63 343 aaPredicted RBP6.73□□□□□ -1.33
AFP-203ENST00000506820 HCN2Q9UL51 889 aa6.73□□□□□ -1.33
AFP-203ENST00000506820 CCDC180Q9P1Z9 1646 aa6.72□□□□□ -1.33
AFP-203ENST00000506820 LGR5O75473 907 aa6.72□□□□□ -1.33
AFP-203ENST00000506820 WEE1P30291 646 aa6.72□□□□□ -1.33
AFP-203ENST00000506820 ADH7P40394 386 aa6.72□□□□□ -1.33
AFP-203ENST00000506820 TBC1D8BQ0IIM8 1120 aa6.72□□□□□ -1.33
AFP-203ENST00000506820 CCINQ13939 588 aa6.72□□□□□ -1.33
AFP-203ENST00000506820 C11orf91Q3C1V1 193 aa6.72□□□□□ -1.33
AFP-203ENST00000506820 ARXQ96QS3 562 aa6.72□□□□□ -1.33
AFP-203ENST00000506820 SPOCK3Q9BQ16 436 aa6.72□□□□□ -1.33
AFP-203ENST00000506820 PLVAPQ9BX97 442 aa6.72□□□□□ -1.33
AFP-203ENST00000506820 UBE2OQ9C0C9 1292 aaKnown RBP6.72□□□□□ -1.33
AFP-203ENST00000506820 IGFLR1Q9H665 355 aa6.72□□□□□ -1.33
AFP-203ENST00000506820 KRBA1A5PL33 1030 aa6.71□□□□□ -1.34
AFP-203ENST00000506820 HOXB4P17483 251 aaPredicted RBP6.71□□□□□ -1.34
AFP-203ENST00000506820 RAB44Q7Z6P3 723 aaPredicted RBP6.71□□□□□ -1.34
AFP-203ENST00000506820 SUV39H2Q9H5I1 410 aa6.71□□□□□ -1.34
AFP-203ENST00000506820 C11orf16Q9NQ32 467 aa6.71□□□□□ -1.34
AFP-203ENST00000506820 SERPINA10Q9UK55 444 aa6.71□□□□□ -1.34
AFP-203ENST00000506820 ACIN1Q9UKV3 1341 aaKnown RBP6.71□□□□□ -1.34
AFP-203ENST00000506820 M0R082 166 aa6.7□□□□□ -1.34
AFP-203ENST00000506820 LILRB5O75023 590 aa6.7□□□□□ -1.34
AFP-203ENST00000506820 SPATA31C1P0DKV0 1188 aa6.7□□□□□ -1.34
AFP-203ENST00000506820 COL8A1P27658 744 aa6.7□□□□□ -1.34
AFP-203ENST00000506820 ARSDP51689 593 aa6.7□□□□□ -1.34
AFP-203ENST00000506820 TRIM28Q13263 835 aaKnown RBP6.7□□□□□ -1.34
AFP-203ENST00000506820 DGKZQ13574 1117 aa6.7□□□□□ -1.34
AFP-203ENST00000506820 ELOAQ14241 798 aaKnown RBP6.7□□□□□ -1.34
AFP-203ENST00000506820 ZNF417Q8TAU3 575 aa6.7□□□□□ -1.34
AFP-203ENST00000506820 ZNF587Q96SQ5 575 aaPredicted RBP6.7□□□□□ -1.34
AFP-203ENST00000506820 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.7□□□□□ -1.34
AFP-203ENST00000506820 APBA3O96018 575 aa6.69□□□□□ -1.34
AFP-203ENST00000506820 IDH3AP50213 366 aa6.69□□□□□ -1.34
AFP-203ENST00000506820 NACC1Q96RE7 527 aa6.69□□□□□ -1.34
AFP-203ENST00000506820 PRDM6Q9NQX0 595 aa6.69□□□□□ -1.34
AFP-203ENST00000506820 KLK14Q9P0G3 267 aa6.69□□□□□ -1.34
AFP-203ENST00000506820 MICAL2O94851 1124 aa6.68□□□□□ -1.34
AFP-203ENST00000506820 MICALL1Q8N3F8 863 aa6.68□□□□□ -1.34
AFP-203ENST00000506820 MYO19Q96H55 970 aa6.68□□□□□ -1.34
AFP-203ENST00000506820 GSX2Q9BZM3 304 aa6.68□□□□□ -1.34
AFP-203ENST00000506820 GTF3C3Q9Y5Q9 886 aa6.68□□□□□ -1.34
AFP-203ENST00000506820 NFKB1P19838 968 aa6.67□□□□□ -1.34
AFP-203ENST00000506820 TRAPPC3LQ5T215 181 aa6.67□□□□□ -1.34
AFP-203ENST00000506820 TRIM11Q96F44 468 aa6.67□□□□□ -1.34
AFP-203ENST00000506820 IFT43Q96FT9 208 aa6.67□□□□□ -1.34
AFP-203ENST00000506820 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
AFP-203ENST00000506820 QTRT2Q9H974 415 aaKnown RBP6.67□□□□□ -1.34
AFP-203ENST00000506820 FAM13BQ9NYF5 915 aa6.67□□□□□ -1.34
AFP-203ENST00000506820 C1QTNF9BB2RNN3 333 aa6.66□□□□□ -1.34
AFP-203ENST00000506820 PRMT3O60678 531 aa6.66□□□□□ -1.34
AFP-203ENST00000506820 PTCD1O75127 700 aaKnown RBP6.66□□□□□ -1.34
AFP-203ENST00000506820 RGS9O75916 674 aaPredicted RBP6.66□□□□□ -1.34
AFP-203ENST00000506820 ATG7O95352 703 aa6.66□□□□□ -1.34
AFP-203ENST00000506820 BRD2P25440 801 aaKnown RBP6.66□□□□□ -1.34
AFP-203ENST00000506820 INPP5BP32019 993 aa6.66□□□□□ -1.34
AFP-203ENST00000506820 PRIMPOLQ96LW4 560 aa6.66□□□□□ -1.34
AFP-203ENST00000506820 MDFIQ99750 246 aa6.66□□□□□ -1.34
AFP-203ENST00000506820 JPH1Q9HDC5 661 aaPredicted RBP6.66□□□□□ -1.34
AFP-203ENST00000506820 DNAJB12Q9NXW2 375 aaKnown RBP6.66□□□□□ -1.34
AFP-203ENST00000506820 DMGDHQ9UI17 866 aaKnown RBP6.66□□□□□ -1.34
AFP-203ENST00000506820 SLC6A14Q9UN76 642 aa6.66□□□□□ -1.34
AFP-203ENST00000506820 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.65□□□□□ -1.34
AFP-203ENST00000506820 MAP3K6O95382 1288 aa6.65□□□□□ -1.34
AFP-203ENST00000506820 ALBP02768 609 aa6.65□□□□□ -1.34
AFP-203ENST00000506820 PROCP04070 461 aa6.65□□□□□ -1.34
AFP-203ENST00000506820 BAG6P46379 1132 aa6.65□□□□□ -1.34
AFP-203ENST00000506820 COL26A1Q96A83 441 aa6.65□□□□□ -1.34
AFP-203ENST00000506820 PBXIP1Q96AQ6 731 aa6.65□□□□□ -1.34
AFP-203ENST00000506820 BCS1LQ9Y276 419 aa6.65□□□□□ -1.34
AFP-203ENST00000506820 RARAP10276 462 aa6.64□□□□□ -1.35
AFP-203ENST00000506820 GATA4P43694 442 aa6.64□□□□□ -1.35
AFP-203ENST00000506820 RAC1P63000 192 aa6.64□□□□□ -1.35
AFP-203ENST00000506820 C16orf46Q6P387 395 aa6.64□□□□□ -1.35
AFP-203ENST00000506820 KRT25Q7Z3Z0 450 aa6.64□□□□□ -1.35
AFP-203ENST00000506820 FAM35AQ86V20 835 aa6.64□□□□□ -1.35
AFP-203ENST00000506820 CD163Q86VB7 1156 aa6.64□□□□□ -1.35
AFP-203ENST00000506820 CMTR1Q8N1G2 835 aaKnown RBP6.64□□□□□ -1.35
AFP-203ENST00000506820 STARD13Q9Y3M8 1113 aa6.64□□□□□ -1.35
AFP-203ENST00000506820 ITGB2P05107 769 aa6.63□□□□□ -1.35
AFP-203ENST00000506820 FKBP5Q13451 457 aaPredicted RBP6.63□□□□□ -1.35
AFP-203ENST00000506820 PSAPL1Q6NUJ1 521 aa6.63□□□□□ -1.35
AFP-203ENST00000506820 TREML1Q86YW5 311 aa6.63□□□□□ -1.35
AFP-203ENST00000506820 NUDT8Q8WV74 236 aa6.63□□□□□ -1.35
AFP-203ENST00000506820 RBSNQ9H1K0 784 aa6.63□□□□□ -1.35
AFP-203ENST00000506820 RTCBQ9Y3I0 505 aaKnown RBP6.63□□□□□ -1.35
AFP-203ENST00000506820 K7ELQ4 463 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms