RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 ACBD3Q9H3P7 528 aa9.46□□□□□ -0.9
AP001960.1-201ENST00000506494 GPC6Q9Y625 555 aaPredicted RBP9.46□□□□□ -0.9
AP001960.1-201ENST00000506494 OPLAHO14841 1288 aa9.45□□□□□ -0.9
AP001960.1-201ENST00000506494 GIPC1O14908 333 aa9.45□□□□□ -0.9
AP001960.1-201ENST00000506494 ATP2B1P20020 1258 aa9.45□□□□□ -0.9
AP001960.1-201ENST00000506494 IDH3AP50213 366 aa9.45□□□□□ -0.9
AP001960.1-201ENST00000506494 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.45□□□□□ -0.9
AP001960.1-201ENST00000506494 ZNF438Q7Z4V0 828 aa9.45□□□□□ -0.9
AP001960.1-201ENST00000506494 CYP4X1Q8N118 509 aa9.45□□□□□ -0.9
AP001960.1-201ENST00000506494 SNX29Q8TEQ0 813 aa9.45□□□□□ -0.9
AP001960.1-201ENST00000506494 SUSD3Q96L08 255 aa9.45□□□□□ -0.9
AP001960.1-201ENST00000506494 POLMQ9NP87 494 aaPredicted RBP9.45□□□□□ -0.9
AP001960.1-201ENST00000506494 PRKAG2Q9UGJ0 569 aa9.45□□□□□ -0.9
AP001960.1-201ENST00000506494 A0A0G2JS52 829 aa9.44□□□□□ -0.9
AP001960.1-201ENST00000506494 RNF144AP50876 292 aaPredicted RBP9.44□□□□□ -0.9
AP001960.1-201ENST00000506494 ARSDP51689 593 aa9.44□□□□□ -0.9
AP001960.1-201ENST00000506494 HS2ST1Q7LGA3 356 aa9.44□□□□□ -0.9
AP001960.1-201ENST00000506494 ZNF654Q8IZM8 581 aa9.44□□□□□ -0.9
AP001960.1-201ENST00000506494 MEIOBQ8N635 442 aa9.44□□□□□ -0.9
AP001960.1-201ENST00000506494 TSEN34Q9BSV6 310 aaKnown RBP9.44□□□□□ -0.9
AP001960.1-201ENST00000506494 J3QL48 77 aa9.43□□□□□ -0.9
AP001960.1-201ENST00000506494 TNFRSF21O75509 655 aa9.43□□□□□ -0.9
AP001960.1-201ENST00000506494 UPP2O95045 317 aa9.43□□□□□ -0.9
AP001960.1-201ENST00000506494 CTSHP09668 335 aa9.43□□□□□ -0.9
AP001960.1-201ENST00000506494 PHKA2P46019 1235 aa9.43□□□□□ -0.9
AP001960.1-201ENST00000506494 CCDC74AQ96AQ1 378 aa9.43□□□□□ -0.9
AP001960.1-201ENST00000506494 INSM2Q96T92 566 aaPredicted RBP9.43□□□□□ -0.9
AP001960.1-201ENST00000506494 C12orf49Q9H741 205 aa9.43□□□□□ -0.9
AP001960.1-201ENST00000506494 PKD2L1Q9P0L9 805 aa9.43□□□□□ -0.9
AP001960.1-201ENST00000506494 INPP5FQ9Y2H2 1132 aa9.43□□□□□ -0.9
AP001960.1-201ENST00000506494 UBAP1LF5GYI3 381 aa9.42□□□□□ -0.9
AP001960.1-201ENST00000506494 SMARCA5O60264 1052 aaPredicted RBP9.42□□□□□ -0.9
AP001960.1-201ENST00000506494 PHACTR2O75167 634 aa9.42□□□□□ -0.9
AP001960.1-201ENST00000506494 PDE12Q6L8Q7 609 aaKnown RBP9.42□□□□□ -0.9
AP001960.1-201ENST00000506494 USP48Q86UV5 1035 aa9.42□□□□□ -0.9
AP001960.1-201ENST00000506494 CMTR1Q8N1G2 835 aaKnown RBP9.42□□□□□ -0.9
AP001960.1-201ENST00000506494 HSH2DQ96JZ2 352 aa9.42□□□□□ -0.9
AP001960.1-201ENST00000506494 FOXD3Q9UJU5 478 aaPredicted RBP9.42□□□□□ -0.9
AP001960.1-201ENST00000506494 EPB42P16452 691 aa9.41□□□□□ -0.9
AP001960.1-201ENST00000506494 DNAJA1P31689 397 aaKnown RBP9.41□□□□□ -0.9
AP001960.1-201ENST00000506494 XKR5Q6UX68 686 aa9.41□□□□□ -0.9
AP001960.1-201ENST00000506494 ZNF280CQ8ND82 737 aa9.41□□□□□ -0.9
AP001960.1-201ENST00000506494 SPATA32Q96LK8 384 aa9.41□□□□□ -0.9
AP001960.1-201ENST00000506494 GGT7Q9UJ14 662 aa9.41□□□□□ -0.9
AP001960.1-201ENST00000506494 RTCBQ9Y3I0 505 aaKnown RBP9.41□□□□□ -0.9
AP001960.1-201ENST00000506494 SPATA31C2B4DYI2 1134 aa9.4□□□□□ -0.9
AP001960.1-201ENST00000506494 GTF2F1P35269 517 aaKnown RBP eCLIP9.4□□□□□ -0.9
AP001960.1-201ENST00000506494 TNNI2P48788 182 aa9.4□□□□□ -0.9
AP001960.1-201ENST00000506494 ZNF394Q53GI3 561 aa9.4□□□□□ -0.9
AP001960.1-201ENST00000506494 ARSJQ5FYB0 599 aaPredicted RBP9.4□□□□□ -0.9
AP001960.1-201ENST00000506494 USPL1Q5W0Q7 1092 aa9.4□□□□□ -0.9
AP001960.1-201ENST00000506494 VPS37DQ86XT2 251 aa9.4□□□□□ -0.9
AP001960.1-201ENST00000506494 DNAJC2Q99543 621 aaKnown RBP9.4□□□□□ -0.9
AP001960.1-201ENST00000506494 FAM8A1Q9UBU6 413 aa9.4□□□□□ -0.9
AP001960.1-201ENST00000506494 DMGDHQ9UI17 866 aaKnown RBP9.4□□□□□ -0.9
AP001960.1-201ENST00000506494 DDX41Q9UJV9 622 aaKnown RBP9.4□□□□□ -0.9
AP001960.1-201ENST00000506494 USP20Q9Y2K6 914 aa9.4□□□□□ -0.9
AP001960.1-201ENST00000506494 SPINT1O43278 529 aa9.39□□□□□ -0.91
AP001960.1-201ENST00000506494 ARID5AQ03989 594 aa9.39□□□□□ -0.91
AP001960.1-201ENST00000506494 TAF1CQ15572 869 aaPredicted RBP9.39□□□□□ -0.91
AP001960.1-201ENST00000506494 DPH6Q7L8W6 267 aa9.39□□□□□ -0.91
AP001960.1-201ENST00000506494 BTLAQ7Z6A9 289 aa9.39□□□□□ -0.91
AP001960.1-201ENST00000506494 EPS8L3Q8TE67 593 aaKnown RBP9.39□□□□□ -0.91
AP001960.1-201ENST00000506494 C7orf43Q8WVR3 580 aa9.39□□□□□ -0.91
AP001960.1-201ENST00000506494 SRCIN1Q9C0H9 1055 aa9.39□□□□□ -0.91
AP001960.1-201ENST00000506494 ELP3Q9H9T3 547 aa9.39□□□□□ -0.91
AP001960.1-201ENST00000506494 ZFYVE28Q9HCC9 887 aa9.39□□□□□ -0.91
AP001960.1-201ENST00000506494 PCDHGB7Q9Y5F8 929 aa9.39□□□□□ -0.91
AP001960.1-201ENST00000506494 GJA3Q9Y6H8 435 aa9.39□□□□□ -0.91
AP001960.1-201ENST00000506494 INPP5BP32019 993 aa9.38□□□□□ -0.91
AP001960.1-201ENST00000506494 IRS1P35568 1242 aa9.38□□□□□ -0.91
AP001960.1-201ENST00000506494 PI16Q6UXB8 463 aa9.38□□□□□ -0.91
AP001960.1-201ENST00000506494 DHX38Q92620 1227 aaKnown RBP9.38□□□□□ -0.91
AP001960.1-201ENST00000506494 ARMC5Q96C12 935 aa9.38□□□□□ -0.91
AP001960.1-201ENST00000506494 OSBPL7Q9BZF2 842 aa9.38□□□□□ -0.91
AP001960.1-201ENST00000506494 GADD45BO75293 160 aaPredicted RBP9.37□□□□□ -0.91
AP001960.1-201ENST00000506494 USP17L7P0C7H9 530 aa9.37□□□□□ -0.91
AP001960.1-201ENST00000506494 PTPN12Q05209 780 aaKnown RBP9.37□□□□□ -0.91
AP001960.1-201ENST00000506494 POU4F2Q12837 409 aa9.37□□□□□ -0.91
AP001960.1-201ENST00000506494 IFFO2Q5TF58 517 aa9.37□□□□□ -0.91
AP001960.1-201ENST00000506494 LRRC69Q6ZNQ3 347 aa9.37□□□□□ -0.91
AP001960.1-201ENST00000506494 PRICKLE2Q7Z3G6 844 aa9.37□□□□□ -0.91
AP001960.1-201ENST00000506494 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
AP001960.1-201ENST00000506494 USP31Q70CQ4 1352 aa9.37□□□□□ -0.91
AP001960.1-201ENST00000506494 CTSOP43234 321 aaPredicted RBP9.36□□□□□ -0.91
AP001960.1-201ENST00000506494 ST13P50502 369 aaKnown RBP9.36□□□□□ -0.91
AP001960.1-201ENST00000506494 TRIP4Q15650 581 aaPredicted RBP9.36□□□□□ -0.91
AP001960.1-201ENST00000506494 WDR44Q5JSH3 913 aa9.36□□□□□ -0.91
AP001960.1-201ENST00000506494 GMLQ99445 158 aa9.36□□□□□ -0.91
AP001960.1-201ENST00000506494 NPHS2Q9NP85 383 aa9.36□□□□□ -0.91
AP001960.1-201ENST00000506494 CUEDC1Q9NWM3 386 aaPredicted RBP9.36□□□□□ -0.91
AP001960.1-201ENST00000506494 A0A1B0GTH6 734 aa9.35□□□□□ -0.91
AP001960.1-201ENST00000506494 TNFRSF10AO00220 468 aa9.35□□□□□ -0.91
AP001960.1-201ENST00000506494 ATP4AP20648 1035 aa9.35□□□□□ -0.91
AP001960.1-201ENST00000506494 RACK1P63244 317 aaKnown RBP9.35□□□□□ -0.91
AP001960.1-201ENST00000506494 MEI1Q5TIA1 1274 aa9.35□□□□□ -0.91
AP001960.1-201ENST00000506494 LYSMD3Q7Z3D4 306 aa9.35□□□□□ -0.91
AP001960.1-201ENST00000506494 ZIC5Q96T25 663 aa9.35□□□□□ -0.91
AP001960.1-201ENST00000506494 PPP4R2Q9NY27 417 aa9.35□□□□□ -0.91
AP001960.1-201ENST00000506494 TMEM63CQ9P1W3 806 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms