RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 CAMTA2O94983 1202 aa12.42□□□□□ -0.42
PTPN20-216ENST00000506080 IL6STP40189 918 aaPredicted RBP12.42□□□□□ -0.42
PTPN20-216ENST00000506080 ST5P78524 1137 aa12.42□□□□□ -0.42
PTPN20-216ENST00000506080 STYK1Q6J9G0 422 aa12.42□□□□□ -0.42
PTPN20-216ENST00000506080 IL17REQ8NFR9 667 aa12.42□□□□□ -0.42
PTPN20-216ENST00000506080 TEX13AQ9BXU3 409 aaPredicted RBP12.42□□□□□ -0.42
PTPN20-216ENST00000506080 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
PTPN20-216ENST00000506080 SRGNP10124 158 aa12.41□□□□□ -0.42
PTPN20-216ENST00000506080 RNF25Q96BH1 459 aaPredicted RBP12.41□□□□□ -0.42
PTPN20-216ENST00000506080 MASTLQ96GX5 879 aa12.41□□□□□ -0.42
PTPN20-216ENST00000506080 TAF1DQ9H5J8 278 aaPredicted RBP12.41□□□□□ -0.42
PTPN20-216ENST00000506080 PASKQ96RG2 1323 aa12.41□□□□□ -0.42
PTPN20-216ENST00000506080 IQCA1LA6NCM1 817 aa12.4□□□□□ -0.42
PTPN20-216ENST00000506080 GNAT3A8MTJ3 354 aa12.4□□□□□ -0.42
PTPN20-216ENST00000506080 U2SURPO15042 1029 aaKnown RBP12.4□□□□□ -0.42
PTPN20-216ENST00000506080 KCNQ3O43525 872 aa12.4□□□□□ -0.42
PTPN20-216ENST00000506080 PIP4K2AP48426 406 aaPredicted RBP12.4□□□□□ -0.42
PTPN20-216ENST00000506080 VEGFBP49765 207 aa12.4□□□□□ -0.42
PTPN20-216ENST00000506080 CNGB1Q14028 1251 aaPredicted RBP12.4□□□□□ -0.42
PTPN20-216ENST00000506080 EAPPQ56P03 285 aaPredicted RBP12.4□□□□□ -0.42
PTPN20-216ENST00000506080 CC2D1BQ5T0F9 858 aaKnown RBP12.4□□□□□ -0.42
PTPN20-216ENST00000506080 SOGA3Q5TF21 947 aa12.4□□□□□ -0.42
PTPN20-216ENST00000506080 LDHDQ86WU2 507 aa12.4□□□□□ -0.42
PTPN20-216ENST00000506080 DZIP3Q86Y13 1208 aaKnown RBP12.4□□□□□ -0.42
PTPN20-216ENST00000506080 FMNL2Q96PY5 1086 aa12.4□□□□□ -0.42
PTPN20-216ENST00000506080 GAS2L2Q8NHY3 880 aa12.39□□□□□ -0.43
PTPN20-216ENST00000506080 AIDAQ96BJ3 306 aa12.39□□□□□ -0.43
PTPN20-216ENST00000506080 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
PTPN20-216ENST00000506080 ZNF541Q9H0D2 1346 aa12.39□□□□□ -0.43
PTPN20-216ENST00000506080 CLSPNQ9HAW4 1339 aa12.39□□□□□ -0.43
PTPN20-216ENST00000506080 TMEM88BA6NKF7 163 aa12.38□□□□□ -0.43
PTPN20-216ENST00000506080 CTCFP49711 727 aaPredicted RBP12.38□□□□□ -0.43
PTPN20-216ENST00000506080 CCDC93Q567U6 631 aa12.38□□□□□ -0.43
PTPN20-216ENST00000506080 NBPF5PQ86XG9 351 aaPredicted RBP12.38□□□□□ -0.43
PTPN20-216ENST00000506080 PRDM10Q9NQV6 1147 aa12.38□□□□□ -0.43
PTPN20-216ENST00000506080 ZNF277Q9NRM2 450 aaPredicted RBP12.38□□□□□ -0.43
PTPN20-216ENST00000506080 ITGBL1O95965 494 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-216ENST00000506080 OLFM4Q6UX06 510 aa12.37□□□□□ -0.43
PTPN20-216ENST00000506080 C7orf43Q8WVR3 580 aa12.37□□□□□ -0.43
PTPN20-216ENST00000506080 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.37□□□□□ -0.43
PTPN20-216ENST00000506080 USP16Q9Y5T5 823 aa12.37□□□□□ -0.43
PTPN20-216ENST00000506080 ARFGEF2Q9Y6D5 1785 aa12.37□□□□□ -0.43
PTPN20-216ENST00000506080 PRAMEF22A3QJZ6 481 aa12.37□□□□□ -0.43
PTPN20-216ENST00000506080 FAM177BA6PVY3 158 aa12.37□□□□□ -0.43
PTPN20-216ENST00000506080 BTBD11A6QL63 1104 aa12.37□□□□□ -0.43
PTPN20-216ENST00000506080 NPR1P16066 1061 aa12.37□□□□□ -0.43
PTPN20-216ENST00000506080 LBX1P52954 281 aa12.37□□□□□ -0.43
PTPN20-216ENST00000506080 FKBP4Q02790 459 aaKnown RBP eCLIP12.37□□□□□ -0.43
PTPN20-216ENST00000506080 HACL1Q9UJ83 578 aa12.37□□□□□ -0.43
PTPN20-216ENST00000506080 KIF7Q2M1P5 1343 aa12.36□□□□□ -0.43
PTPN20-216ENST00000506080 SIPA1L3O60292 1781 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-216ENST00000506080 BCORQ6W2J9 1755 aa12.36□□□□□ -0.43
PTPN20-216ENST00000506080 SCN4AP35499 1836 aa12.36□□□□□ -0.43
PTPN20-216ENST00000506080 RIOK3O14730 519 aaKnown RBP12.36□□□□□ -0.43
PTPN20-216ENST00000506080 EPHX2P34913 555 aa12.36□□□□□ -0.43
PTPN20-216ENST00000506080 MAP1SQ66K74 1059 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-216ENST00000506080 WBP1LQ9NX94 342 aa12.36□□□□□ -0.43
PTPN20-216ENST00000506080 RNF123Q5XPI4 1314 aa12.36□□□□□ -0.43
PTPN20-216ENST00000506080 PER1O15534 1290 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-216ENST00000506080 DEFB115Q30KQ5 88 aa12.35□□□□□ -0.43
PTPN20-216ENST00000506080 COL3A1P02461 1466 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-216ENST00000506080 CLEC4GQ6UXB4 293 aa12.34□□□□□ -0.43
PTPN20-216ENST00000506080 CNTROBQ8N137 903 aa12.34□□□□□ -0.43
PTPN20-216ENST00000506080 EFCAB3Q8N7B9 438 aa12.34□□□□□ -0.43
PTPN20-216ENST00000506080 PHACTR3Q96KR7 559 aa12.34□□□□□ -0.43
PTPN20-216ENST00000506080 NIP7Q9Y221 180 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTPN20-216ENST00000506080 ZNF652Q9Y2D9 606 aa12.34□□□□□ -0.43
PTPN20-216ENST00000506080 CEMIPQ8WUJ3 1361 aa12.34□□□□□ -0.43
PTPN20-216ENST00000506080 HSPA8P11142 646 aaKnown RBP12.33□□□□□ -0.44
PTPN20-216ENST00000506080 IARSP41252 1262 aaKnown RBP12.33□□□□□ -0.44
PTPN20-216ENST00000506080 TPTE2Q6XPS3 522 aa12.33□□□□□ -0.44
PTPN20-216ENST00000506080 RTKN2Q8IZC4 609 aa12.33□□□□□ -0.44
PTPN20-216ENST00000506080 SYNE4Q8N205 404 aa12.33□□□□□ -0.44
PTPN20-216ENST00000506080 KLRG2A4D1S0 409 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-216ENST00000506080 FZD9O00144 591 aa12.32□□□□□ -0.44
PTPN20-216ENST00000506080 PRKAR2BP31323 418 aa12.32□□□□□ -0.44
PTPN20-216ENST00000506080 PNMA8AQ86V59 439 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-216ENST00000506080 WDR33Q9C0J8 1336 aaKnown RBP12.32□□□□□ -0.44
PTPN20-216ENST00000506080 PLSCR2Q9NRY7 297 aa12.32□□□□□ -0.44
PTPN20-216ENST00000506080 ABT1Q9ULW3 272 aaKnown RBP12.32□□□□□ -0.44
PTPN20-216ENST00000506080 ADAMTSL1Q8N6G6 1762 aa12.31□□□□□ -0.44
PTPN20-216ENST00000506080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.31□□□□□ -0.44
PTPN20-216ENST00000506080 RASSF10A6NK89 507 aa12.31□□□□□ -0.44
PTPN20-216ENST00000506080 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
PTPN20-216ENST00000506080 SNRPA1P09661 255 aaKnown RBP12.31□□□□□ -0.44
PTPN20-216ENST00000506080 GTF2E1P29083 439 aaPredicted RBP12.31□□□□□ -0.44
PTPN20-216ENST00000506080 NBPF10Q6P3W6 841 aaKnown RBP12.31□□□□□ -0.44
PTPN20-216ENST00000506080 C3orf67Q6ZVT6 689 aa12.31□□□□□ -0.44
PTPN20-216ENST00000506080 MCM10Q7L590 875 aa12.31□□□□□ -0.44
PTPN20-216ENST00000506080 NBPF15Q8N660 670 aa12.31□□□□□ -0.44
PTPN20-216ENST00000506080 ABHD8Q96I13 439 aa12.31□□□□□ -0.44
PTPN20-216ENST00000506080 ZFP91Q96JP5 570 aaPredicted RBP12.31□□□□□ -0.44
PTPN20-216ENST00000506080 GJA3Q9Y6H8 435 aa12.31□□□□□ -0.44
PTPN20-216ENST00000506080 ST18O60284 1047 aa12.3□□□□□ -0.44
PTPN20-216ENST00000506080 ALDH1B1P30837 517 aa12.3□□□□□ -0.44
PTPN20-216ENST00000506080 FMR1Q06787 632 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTPN20-216ENST00000506080 HLFQ16534 295 aa12.3□□□□□ -0.44
PTPN20-216ENST00000506080 GPC2Q8N158 579 aa12.3□□□□□ -0.44
PTPN20-216ENST00000506080 MAP2K1Q02750 393 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-216ENST00000506080 GRM1Q13255 1194 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms