RNA–Protein interactions for RNA: ENST00000505614.1

NDFIP1-203, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 3

Gene NDFIP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-203ENST00000505614 BRPF3Q9ULD4 1205 aa8.7□□□□□ -1.02
NDFIP1-203ENST00000505614 FNDC3AQ9Y2H6 1198 aaKnown RBP8.7□□□□□ -1.02
NDFIP1-203ENST00000505614 KHNYNO15037 678 aaKnown RBP8.69□□□□□ -1.02
NDFIP1-203ENST00000505614 MZF1P28698 734 aaPredicted RBP8.69□□□□□ -1.02
NDFIP1-203ENST00000505614 ARHGAP4P98171 946 aa8.69□□□□□ -1.02
NDFIP1-203ENST00000505614 TNP2Q05952 138 aa8.69□□□□□ -1.02
NDFIP1-203ENST00000505614 EFCC1Q9HA90 598 aa8.69□□□□□ -1.02
NDFIP1-203ENST00000505614 BRD7Q9NPI1 651 aa8.69□□□□□ -1.02
NDFIP1-203ENST00000505614 NDFIP2Q9NV92 336 aa8.69□□□□□ -1.02
NDFIP1-203ENST00000505614 KCNH4Q9UQ05 1017 aa8.69□□□□□ -1.02
NDFIP1-203ENST00000505614 OPLAHO14841 1288 aa8.68□□□□□ -1.02
NDFIP1-203ENST00000505614 ZBTB39O15060 712 aa8.68□□□□□ -1.02
NDFIP1-203ENST00000505614 EFSO43281 561 aa8.68□□□□□ -1.02
NDFIP1-203ENST00000505614 BNIP3LO60238 219 aa8.68□□□□□ -1.02
NDFIP1-203ENST00000505614 THBS1P07996 1170 aa8.68□□□□□ -1.02
NDFIP1-203ENST00000505614 MAPTP10636 758 aaKnown RBP8.68□□□□□ -1.02
NDFIP1-203ENST00000505614 ECM1Q16610 540 aa8.68□□□□□ -1.02
NDFIP1-203ENST00000505614 KLRG1Q96E93 195 aa8.68□□□□□ -1.02
NDFIP1-203ENST00000505614 MARK1Q9P0L2 795 aa8.68□□□□□ -1.02
NDFIP1-203ENST00000505614 VSIG8P0DPA2 414 aa8.67□□□□□ -1.02
NDFIP1-203ENST00000505614 VEGFBP49765 207 aa8.67□□□□□ -1.02
NDFIP1-203ENST00000505614 EHHADHQ08426 723 aa8.67□□□□□ -1.02
NDFIP1-203ENST00000505614 CCDC27Q2M243 656 aa8.67□□□□□ -1.02
NDFIP1-203ENST00000505614 FAM182BQ5T319 152 aa8.67□□□□□ -1.02
NDFIP1-203ENST00000505614 IRF7Q92985 503 aa8.67□□□□□ -1.02
NDFIP1-203ENST00000505614 DCTN4Q9UJW0 460 aa8.67□□□□□ -1.02
NDFIP1-203ENST00000505614 NSFL1CQ9UNZ2 370 aaKnown RBP8.67□□□□□ -1.02
NDFIP1-203ENST00000505614 RTCBQ9Y3I0 505 aaKnown RBP8.67□□□□□ -1.02
NDFIP1-203ENST00000505614 DCDC2BA2VCK2 349 aa8.66□□□□□ -1.02
NDFIP1-203ENST00000505614 MARSP56192 900 aaKnown RBP8.66□□□□□ -1.02
NDFIP1-203ENST00000505614 PDE3BQ13370 1112 aa8.66□□□□□ -1.02
NDFIP1-203ENST00000505614 NEUROD1Q13562 356 aa8.66□□□□□ -1.02
NDFIP1-203ENST00000505614 FAM26DQ5JW98 314 aa8.66□□□□□ -1.02
NDFIP1-203ENST00000505614 RGL4Q8IZJ4 473 aa8.66□□□□□ -1.02
NDFIP1-203ENST00000505614 ABHD17AQ96GS6 310 aa8.66□□□□□ -1.02
NDFIP1-203ENST00000505614 STK17AQ9UEE5 414 aa8.66□□□□□ -1.02
NDFIP1-203ENST00000505614 FZD6O60353 706 aa8.65□□□□□ -1.02
NDFIP1-203ENST00000505614 FGFR3P22607 806 aa8.65□□□□□ -1.02
NDFIP1-203ENST00000505614 DNM1Q05193 864 aaKnown RBP8.65□□□□□ -1.02
NDFIP1-203ENST00000505614 ZSCAN29Q8IWY8 852 aaPredicted RBP8.65□□□□□ -1.02
NDFIP1-203ENST00000505614 CMTR1Q8N1G2 835 aaKnown RBP8.65□□□□□ -1.02
NDFIP1-203ENST00000505614 GPR152Q8TDT2 470 aa8.65□□□□□ -1.02
NDFIP1-203ENST00000505614 EDEM1Q92611 657 aa8.65□□□□□ -1.02
NDFIP1-203ENST00000505614 EGFRP00533 1210 aa8.64□□□□□ -1.03
NDFIP1-203ENST00000505614 PDGFAP04085 211 aa8.64□□□□□ -1.03
NDFIP1-203ENST00000505614 ERCC3P19447 782 aa8.64□□□□□ -1.03
NDFIP1-203ENST00000505614 ATCAYQ86WG3 371 aa8.64□□□□□ -1.03
NDFIP1-203ENST00000505614 RBCK1Q9BYM8 510 aa8.64□□□□□ -1.03
NDFIP1-203ENST00000505614 MAPK1P28482 360 aa8.63□□□□□ -1.03
NDFIP1-203ENST00000505614 SFSWAPQ12872 951 aaKnown RBP8.63□□□□□ -1.03
NDFIP1-203ENST00000505614 CCINQ13939 588 aa8.63□□□□□ -1.03
NDFIP1-203ENST00000505614 NUDT16Q96DE0 195 aaKnown RBP8.63□□□□□ -1.03
NDFIP1-203ENST00000505614 POLIQ9UNA4 740 aa8.63□□□□□ -1.03
NDFIP1-203ENST00000505614 CCDC9Q9Y3X0 531 aaKnown RBP8.63□□□□□ -1.03
NDFIP1-203ENST00000505614 UBAP1LF5GYI3 381 aa8.62□□□□□ -1.03
NDFIP1-203ENST00000505614 XYLBO75191 536 aa8.62□□□□□ -1.03
NDFIP1-203ENST00000505614 NEFLP07196 543 aa8.62□□□□□ -1.03
NDFIP1-203ENST00000505614 MX2P20592 715 aa8.62□□□□□ -1.03
NDFIP1-203ENST00000505614 GMPRP36959 345 aa8.62□□□□□ -1.03
NDFIP1-203ENST00000505614 PDE12Q6L8Q7 609 aaKnown RBP8.62□□□□□ -1.03
NDFIP1-203ENST00000505614 CCDC87Q9NVE4 849 aa8.62□□□□□ -1.03
NDFIP1-203ENST00000505614 GPR25O00155 361 aa8.61□□□□□ -1.03
NDFIP1-203ENST00000505614 CD33P20138 364 aa8.61□□□□□ -1.03
NDFIP1-203ENST00000505614 SPEM2Q0P670 501 aa8.61□□□□□ -1.03
NDFIP1-203ENST00000505614 XKR5Q6UX68 686 aa8.61□□□□□ -1.03
NDFIP1-203ENST00000505614 GJD3Q8N144 294 aa8.61□□□□□ -1.03
NDFIP1-203ENST00000505614 TMC1Q8TDI8 760 aa8.61□□□□□ -1.03
NDFIP1-203ENST00000505614 DMRTB1Q96MA1 342 aa8.61□□□□□ -1.03
NDFIP1-203ENST00000505614 AVENQ9NQS1 362 aaPredicted RBP8.61□□□□□ -1.03
NDFIP1-203ENST00000505614 MBIPQ9NS73 344 aa8.61□□□□□ -1.03
NDFIP1-203ENST00000505614 PRR12Q9ULL5 1215 aa8.61□□□□□ -1.03
NDFIP1-203ENST00000505614 KCNMB2Q9Y691 235 aa8.61□□□□□ -1.03
NDFIP1-203ENST00000505614 BMP4P12644 408 aa8.6□□□□□ -1.03
NDFIP1-203ENST00000505614 MAP2K3P46734 347 aa8.6□□□□□ -1.03
NDFIP1-203ENST00000505614 C8orf34Q49A92 452 aa8.6□□□□□ -1.03
NDFIP1-203ENST00000505614 ASB16Q96NS5 453 aa8.6□□□□□ -1.03
NDFIP1-203ENST00000505614 PNMA5Q96PV4 448 aa8.6□□□□□ -1.03
NDFIP1-203ENST00000505614 PODXL2Q9NZ53 605 aa8.6□□□□□ -1.03
NDFIP1-203ENST00000505614 MFAP1P55081 439 aaKnown RBP8.59□□□□□ -1.03
NDFIP1-203ENST00000505614 CTBSQ01459 385 aa8.59□□□□□ -1.03
NDFIP1-203ENST00000505614 NLRP13Q86W25 1043 aa8.59□□□□□ -1.03
NDFIP1-203ENST00000505614 GPR161Q8N6U8 529 aaKnown RBP8.59□□□□□ -1.03
NDFIP1-203ENST00000505614 GSX2Q9BZM3 304 aa8.59□□□□□ -1.03
NDFIP1-203ENST00000505614 STRN4Q9NRL3 753 aa8.59□□□□□ -1.03
NDFIP1-203ENST00000505614 ERBB4Q15303 1308 aa8.58□□□□□ -1.04
NDFIP1-203ENST00000505614 FAM129BQ96TA1 746 aa8.58□□□□□ -1.04
NDFIP1-203ENST00000505614 COL25A1Q9BXS0 654 aaPredicted RBP8.58□□□□□ -1.04
NDFIP1-203ENST00000505614 USP20Q9Y2K6 914 aa8.58□□□□□ -1.04
NDFIP1-203ENST00000505614 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.58□□□□□ -1.04
NDFIP1-203ENST00000505614 MAP3K6O95382 1288 aa8.57□□□□□ -1.04
NDFIP1-203ENST00000505614 GRNP28799 593 aaKnown RBP8.57□□□□□ -1.04
NDFIP1-203ENST00000505614 GAS6Q14393 721 aa8.57□□□□□ -1.04
NDFIP1-203ENST00000505614 ZNF438Q7Z4V0 828 aa8.57□□□□□ -1.04
NDFIP1-203ENST00000505614 PMEPA1Q969W9 287 aa8.57□□□□□ -1.04
NDFIP1-203ENST00000505614 GGNBP2Q9H3C7 697 aa8.57□□□□□ -1.04
NDFIP1-203ENST00000505614 ARAFP10398 606 aa8.56□□□□□ -1.04
NDFIP1-203ENST00000505614 SRSF11Q05519 484 aaKnown RBP8.56□□□□□ -1.04
NDFIP1-203ENST00000505614 COL19A1Q14993 1142 aa8.56□□□□□ -1.04
NDFIP1-203ENST00000505614 TRIP4Q15650 581 aaPredicted RBP8.56□□□□□ -1.04
NDFIP1-203ENST00000505614 PCSK7Q16549 785 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms