RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 CCDC88AQ3V6T2 1871 aa10.19□□□□□ -0.78
MATR3-210ENST00000504643 CHMP4AQ9BY43 222 aa10.19□□□□□ -0.78
MATR3-210ENST00000504643 CLEC11AQ9Y240 323 aa10.19□□□□□ -0.78
MATR3-210ENST00000504643 COL11A2P13942 1736 aaPredicted RBP10.18□□□□□ -0.78
MATR3-210ENST00000504643 SUSD4Q5VX71 490 aa10.18□□□□□ -0.78
MATR3-210ENST00000504643 TTLL7Q6ZT98 887 aa10.18□□□□□ -0.78
MATR3-210ENST00000504643 TMC4Q7Z404 712 aa10.18□□□□□ -0.78
MATR3-210ENST00000504643 TNS4Q8IZW8 715 aa10.18□□□□□ -0.78
MATR3-210ENST00000504643 PASKQ96RG2 1323 aa10.18□□□□□ -0.78
MATR3-210ENST00000504643 SCN4AP35499 1836 aa10.18□□□□□ -0.78
MATR3-210ENST00000504643 HSPA1AP0DMV8 641 aaKnown RBP10.18□□□□□ -0.78
MATR3-210ENST00000504643 HSPA1BP0DMV9 641 aaKnown RBP10.18□□□□□ -0.78
MATR3-210ENST00000504643 NUTM1Q86Y26 1132 aa10.18□□□□□ -0.78
MATR3-210ENST00000504643 ZBTB3Q9H5J0 574 aa10.18□□□□□ -0.78
MATR3-210ENST00000504643 PPEF1O14829 653 aaPredicted RBP10.17□□□□□ -0.78
MATR3-210ENST00000504643 HOXB7P09629 217 aa10.17□□□□□ -0.78
MATR3-210ENST00000504643 TMPOP42166 694 aaKnown RBP10.17□□□□□ -0.78
MATR3-210ENST00000504643 EAPPQ56P03 285 aaPredicted RBP10.17□□□□□ -0.78
MATR3-210ENST00000504643 LARGE2Q8N3Y3 721 aa10.17□□□□□ -0.78
MATR3-210ENST00000504643 NTSR2O95665 410 aa10.17□□□□□ -0.78
MATR3-210ENST00000504643 EIF2S2P20042 333 aaKnown RBP10.17□□□□□ -0.78
MATR3-210ENST00000504643 GPTP24298 496 aa10.17□□□□□ -0.78
MATR3-210ENST00000504643 USP50Q70EL3 339 aaPredicted RBP10.17□□□□□ -0.78
MATR3-210ENST00000504643 NIM1KQ8IY84 436 aa10.17□□□□□ -0.78
MATR3-210ENST00000504643 AIDAQ96BJ3 306 aa10.17□□□□□ -0.78
MATR3-210ENST00000504643 LAMB4A4D0S4 1761 aa10.17□□□□□ -0.78
MATR3-210ENST00000504643 CNTNAP1P78357 1384 aa10.16□□□□□ -0.78
MATR3-210ENST00000504643 ITGBL1O95965 494 aaPredicted RBP10.16□□□□□ -0.78
MATR3-210ENST00000504643 HSP90B1P14625 803 aaKnown RBP10.16□□□□□ -0.78
MATR3-210ENST00000504643 COL13A1Q5TAT6 717 aaPredicted RBP10.16□□□□□ -0.78
MATR3-210ENST00000504643 CNTROBQ8N137 903 aa10.16□□□□□ -0.78
MATR3-210ENST00000504643 ATP6V0A2Q9Y487 856 aa10.16□□□□□ -0.78
MATR3-210ENST00000504643 MYBBP1AQ9BQG0 1328 aaKnown RBP10.16□□□□□ -0.78
MATR3-210ENST00000504643 WDR43Q15061 677 aaKnown RBP eCLIP10.16□□□□□ -0.788e-6■■■■□ 19.4
MATR3-210ENST00000504643 SP8Q8IXZ3 490 aa10.16□□□□□ -0.78
MATR3-210ENST00000504643 RUNDC1Q96C34 613 aa10.16□□□□□ -0.78
MATR3-210ENST00000504643 THUMPD2Q9BTF0 503 aaKnown RBP10.16□□□□□ -0.78
MATR3-210ENST00000504643 DDX21Q9NR30 783 aaKnown RBP eCLIP10.16□□□□□ -0.78
MATR3-210ENST00000504643 KDM3BQ7LBC6 1761 aa10.15□□□□□ -0.78
MATR3-210ENST00000504643 UBN2Q6ZU65 1347 aa10.15□□□□□ -0.78
MATR3-210ENST00000504643 ZNF541Q9H0D2 1346 aa10.15□□□□□ -0.78
MATR3-210ENST00000504643 TCIRG1Q13488 830 aa10.15□□□□□ -0.78
MATR3-210ENST00000504643 PDIA6Q15084 440 aa10.15□□□□□ -0.78
MATR3-210ENST00000504643 PRDM10Q9NQV6 1147 aa10.15□□□□□ -0.78
MATR3-210ENST00000504643 ABCC12Q96J65 1359 aa10.15□□□□□ -0.79
MATR3-210ENST00000504643 CHL1O00533 1208 aa10.15□□□□□ -0.79
MATR3-210ENST00000504643 CALD1Q05682 793 aaKnown RBP10.15□□□□□ -0.79
MATR3-210ENST00000504643 DDX46Q7L014 1031 aaKnown RBP10.15□□□□□ -0.79
MATR3-210ENST00000504643 RTFDC1Q9BY42 306 aaPredicted RBP10.15□□□□□ -0.79
MATR3-210ENST00000504643 MKRN1Q9UHC7 482 aaKnown RBP10.15□□□□□ -0.79
MATR3-210ENST00000504643 DEFB115Q30KQ5 88 aa10.14□□□□□ -0.79
MATR3-210ENST00000504643 COPS6Q7L5N1 327 aa10.14□□□□□ -0.79
MATR3-210ENST00000504643 GJA3Q9Y6H8 435 aa10.14□□□□□ -0.79
MATR3-210ENST00000504643 RASSF10A6NK89 507 aa10.14□□□□□ -0.79
MATR3-210ENST00000504643 PPIP5K2O43314 1243 aa10.14□□□□□ -0.79
MATR3-210ENST00000504643 POTEIP0CG38 1075 aa10.14□□□□□ -0.79
MATR3-210ENST00000504643 POTEJP0CG39 1038 aa10.14□□□□□ -0.79
MATR3-210ENST00000504643 CTCFP49711 727 aaPredicted RBP10.14□□□□□ -0.79
MATR3-210ENST00000504643 MAP2K1Q02750 393 aaPredicted RBP10.14□□□□□ -0.79
MATR3-210ENST00000504643 TNIP1Q15025 636 aa10.14□□□□□ -0.79
MATR3-210ENST00000504643 LRP10Q7Z4F1 713 aa10.14□□□□□ -0.79
MATR3-210ENST00000504643 DBF4Q9UBU7 674 aaPredicted RBP10.14□□□□□ -0.79
MATR3-210ENST00000504643 TRMT112Q9UI30 125 aaKnown RBP10.14□□□□□ -0.79
MATR3-210ENST00000504643 ZNRF3Q9ULT6 936 aa10.14□□□□□ -0.79
MATR3-210ENST00000504643 SH3TC1Q8TE82 1336 aa10.13□□□□□ -0.79
MATR3-210ENST00000504643 CDHR2Q9BYE9 1310 aa10.13□□□□□ -0.79
MATR3-210ENST00000504643 ECE1P42892 770 aa10.13□□□□□ -0.79
MATR3-210ENST00000504643 OLFM4Q6UX06 510 aa10.13□□□□□ -0.79
MATR3-210ENST00000504643 DPP8Q6V1X1 898 aaPredicted RBP10.13□□□□□ -0.79
MATR3-210ENST00000504643 MPNDQ8N594 471 aa10.13□□□□□ -0.79
MATR3-210ENST00000504643 SNED1Q8TER0 1413 aa10.13□□□□□ -0.79
MATR3-210ENST00000504643 NLRP10Q86W26 655 aa10.13□□□□□ -0.79
MATR3-210ENST00000504643 PLBD2Q8NHP8 589 aa10.13□□□□□ -0.79
MATR3-210ENST00000504643 XAGE3Q8WTP9 111 aa10.13□□□□□ -0.79
MATR3-210ENST00000504643 ADARB2Q9NS39 739 aaKnown RBP10.13□□□□□ -0.79
MATR3-210ENST00000504643 HYPKQ9NX55 129 aa10.13□□□□□ -0.79
MATR3-210ENST00000504643 NUP98P52948 1817 aa10.12□□□□□ -0.79
MATR3-210ENST00000504643 ANKRD13DQ6ZTN6 518 aa10.12□□□□□ -0.79
MATR3-210ENST00000504643 ZC3H15Q8WU90 426 aaKnown RBP10.12□□□□□ -0.79
MATR3-210ENST00000504643 AIMP1Q12904 312 aaKnown RBP10.12□□□□□ -0.79
MATR3-210ENST00000504643 GRAPQ13588 217 aa10.12□□□□□ -0.79
MATR3-210ENST00000504643 GRAPLQ8TC17 118 aaPredicted RBP10.12□□□□□ -0.79
MATR3-210ENST00000504643 CFAP44Q96MT7 982 aa10.12□□□□□ -0.79
MATR3-210ENST00000504643 DLG5Q8TDM6 1919 aa10.11□□□□□ -0.79
MATR3-210ENST00000504643 VEGFBP49765 207 aa10.11□□□□□ -0.79
MATR3-210ENST00000504643 TRIM28Q13263 835 aaKnown RBP10.11□□□□□ -0.79
MATR3-210ENST00000504643 KIAA2012Q0VF49 1180 aa10.11□□□□□ -0.79
MATR3-210ENST00000504643 HDGFL1Q5TGJ6 251 aa10.11□□□□□ -0.79
MATR3-210ENST00000504643 MAP1SQ66K74 1059 aaPredicted RBP10.11□□□□□ -0.79
MATR3-210ENST00000504643 CIAPIN1Q6FI81 312 aa10.11□□□□□ -0.79
MATR3-210ENST00000504643 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
MATR3-210ENST00000504643 ABT1Q9ULW3 272 aaKnown RBP10.11□□□□□ -0.79
MATR3-210ENST00000504643 ABCC4O15439 1325 aa10.11□□□□□ -0.79
MATR3-210ENST00000504643 SCNN1DP51172 638 aa10.1□□□□□ -0.79
MATR3-210ENST00000504643 CACNA1SQ13698 1873 aa10.1□□□□□ -0.79
MATR3-210ENST00000504643 NEUROD2Q15784 382 aa10.1□□□□□ -0.79
MATR3-210ENST00000504643 WBP1LQ9NX94 342 aa10.1□□□□□ -0.79
MATR3-210ENST00000504643 GPRC5DQ9NZD1 345 aa10.1□□□□□ -0.79
MATR3-210ENST00000504643 LAS1LQ9Y4W2 734 aaKnown RBP10.1□□□□□ -0.79
MATR3-210ENST00000504643 TCERG1O14776 1098 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms