RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 NCBP3Q53F19 620 aaKnown RBP8.98□□□□□ -0.97
NEDD9-208ENST00000504387 PAXIP1Q6ZW49 1069 aaPredicted RBP8.98□□□□□ -0.97
NEDD9-208ENST00000504387 ZNF397Q8NF99 534 aaPredicted RBP8.98□□□□□ -0.97
NEDD9-208ENST00000504387 USP44Q9H0E7 712 aa8.98□□□□□ -0.97
NEDD9-208ENST00000504387 ZNF446Q9NWS9 450 aa8.98□□□□□ -0.97
NEDD9-208ENST00000504387 GNAI3P08754 354 aa8.98□□□□□ -0.97
NEDD9-208ENST00000504387 HDGFL1Q5TGJ6 251 aa8.98□□□□□ -0.97
NEDD9-208ENST00000504387 RAB11FIP4Q86YS3 637 aa8.98□□□□□ -0.97
NEDD9-208ENST00000504387 C10orf67Q8IYJ2 551 aa8.98□□□□□ -0.97
NEDD9-208ENST00000504387 AOPEPQ8N6M6 819 aa8.98□□□□□ -0.97
NEDD9-208ENST00000504387 PGBD1Q96JS3 809 aa8.98□□□□□ -0.97
NEDD9-208ENST00000504387 PAXBP1Q9Y5B6 917 aa8.98□□□□□ -0.97
NEDD9-208ENST00000504387 GLI2P10070 1586 aa8.98□□□□□ -0.97
NEDD9-208ENST00000504387 ZKSCAN1P17029 563 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-208ENST00000504387 TAF7Q15545 349 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-208ENST00000504387 LEO1Q8WVC0 666 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-208ENST00000504387 RBM8AQ9Y5S9 174 aaKnown RBP8.97□□□□□ -0.97
NEDD9-208ENST00000504387 MORC2Q9Y6X9 1032 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-208ENST00000504387 MROH1Q8NDA8 1641 aa8.97□□□□□ -0.97
NEDD9-208ENST00000504387 PTPRCP08575 1304 aa8.97□□□□□ -0.97
NEDD9-208ENST00000504387 CCT2P78371 535 aaKnown RBP8.97□□□□□ -0.97
NEDD9-208ENST00000504387 GABPB1Q06547 395 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-208ENST00000504387 ABTB2Q8N961 1025 aa8.97□□□□□ -0.97
NEDD9-208ENST00000504387 TMEM87AQ8NBN3 555 aa8.97□□□□□ -0.97
NEDD9-208ENST00000504387 KLHDC4Q8TBB5 520 aa8.97□□□□□ -0.97
NEDD9-208ENST00000504387 ST5P78524 1137 aa8.97□□□□□ -0.97
NEDD9-208ENST00000504387 CHST3Q7LGC8 479 aa8.97□□□□□ -0.97
NEDD9-208ENST00000504387 DNAI1Q9UI46 699 aa8.97□□□□□ -0.97
NEDD9-208ENST00000504387 METP08581 1390 aa8.96□□□□□ -0.97
NEDD9-208ENST00000504387 PNPLA6Q8IY17 1366 aa8.96□□□□□ -0.97
NEDD9-208ENST00000504387 TTC21BQ7Z4L5 1316 aa8.96□□□□□ -0.97
NEDD9-208ENST00000504387 URI1O94763 535 aaPredicted RBP8.96□□□□□ -0.97
NEDD9-208ENST00000504387 TMC6Q7Z403 805 aa8.96□□□□□ -0.97
NEDD9-208ENST00000504387 PI4K2BQ8TCG2 481 aa8.96□□□□□ -0.97
NEDD9-208ENST00000504387 PUS7Q96PZ0 661 aaKnown RBP8.96□□□□□ -0.97
NEDD9-208ENST00000504387 SDF4Q9BRK5 362 aa8.96□□□□□ -0.97
NEDD9-208ENST00000504387 VWDEQ8N2E2 1590 aa8.96□□□□□ -0.97
NEDD9-208ENST00000504387 TRIM66O15016 1216 aa8.96□□□□□ -0.98
NEDD9-208ENST00000504387 SLU7O95391 586 aaKnown RBP8.96□□□□□ -0.98
NEDD9-208ENST00000504387 HDGFP51858 240 aaKnown RBP8.96□□□□□ -0.98
NEDD9-208ENST00000504387 SNW1Q13573 536 aaKnown RBP8.96□□□□□ -0.98
NEDD9-208ENST00000504387 BRF1Q92994 677 aa8.96□□□□□ -0.98
NEDD9-208ENST00000504387 SEC62Q99442 399 aaKnown RBP8.96□□□□□ -0.98
NEDD9-208ENST00000504387 ADGRB1O14514 1584 aa8.96□□□□□ -0.98
NEDD9-208ENST00000504387 DIP2BQ9P265 1576 aa8.96□□□□□ -0.98
NEDD9-208ENST00000504387 MAP3K19Q56UN5 1328 aa8.96□□□□□ -0.98
NEDD9-208ENST00000504387 SALL3Q9BXA9 1300 aa8.96□□□□□ -0.98
NEDD9-208ENST00000504387 ME1P48163 572 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 CLCN6P51797 869 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 SLFNL1Q499Z3 407 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 OTUD7BQ6GQQ9 843 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 AACSQ86V21 672 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 PLA2G4DQ86XP0 818 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 ADGRB3O60242 1522 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 FRMPD1Q5SYB0 1578 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 ZRSR1Q15695 479 aaKnown RBP8.95□□□□□ -0.98
NEDD9-208ENST00000504387 CCDC30Q5VVM6 783 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 CREB3L3Q68CJ9 461 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 BLOC1S2Q6QNY1 142 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 KRBA2Q6ZNG9 492 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 CCDC129Q6ZRS4 1044 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 CCAR1Q8IX12 1150 aaKnown RBP8.95□□□□□ -0.98
NEDD9-208ENST00000504387 EYA1Q99502 592 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 C9orf78Q9NZ63 289 aaPredicted RBP8.95□□□□□ -0.98
NEDD9-208ENST00000504387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.95□□□□□ -0.98
NEDD9-208ENST00000504387 PRR36Q9H6K5 1346 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 PI4KAP2A4QPH2 592 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 NMIQ13287 307 aaPredicted RBP8.95□□□□□ -0.98
NEDD9-208ENST00000504387 PI4KAP1Q8N8J0 262 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 FSD1Q9BTV5 496 aa8.95□□□□□ -0.98
NEDD9-208ENST00000504387 RICTORQ6R327 1708 aa8.94□□□□□ -0.98
NEDD9-208ENST00000504387 ABCC3O15438 1527 aa8.94□□□□□ -0.98
NEDD9-208ENST00000504387 A0A1B0GVL5 298 aa8.94□□□□□ -0.98
NEDD9-208ENST00000504387 LMOD1P29536 600 aaPredicted RBP8.94□□□□□ -0.98
NEDD9-208ENST00000504387 TAF3Q5VWG9 929 aa8.94□□□□□ -0.98
NEDD9-208ENST00000504387 CLSTN2Q9H4D0 955 aa8.94□□□□□ -0.98
NEDD9-208ENST00000504387 TOMM22Q9NS69 142 aa8.94□□□□□ -0.98
NEDD9-208ENST00000504387 CLASRPQ8N2M8 674 aaKnown RBP8.94□□□□□ -0.98
NEDD9-208ENST00000504387 MNS1Q8NEH6 495 aa8.94□□□□□ -0.98
NEDD9-208ENST00000504387 NCOA5Q9HCD5 579 aaKnown RBP8.94□□□□□ -0.98
NEDD9-208ENST00000504387 IFNKQ9P0W0 207 aa8.94□□□□□ -0.98
NEDD9-208ENST00000504387 CALCOCO1Q9P1Z2 691 aa8.94□□□□□ -0.98
NEDD9-208ENST00000504387 CAMSAP1Q5T5Y3 1602 aa8.94□□□□□ -0.98
NEDD9-208ENST00000504387 NEO1Q92859 1461 aa8.94□□□□□ -0.98
NEDD9-208ENST00000504387 TEFQ10587 303 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 MPRIPQ6WCQ1 1025 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 IPO4Q8TEX9 1081 aaKnown RBP8.93□□□□□ -0.98
NEDD9-208ENST00000504387 TLR7Q9NYK1 1049 aaKnown RBP8.93□□□□□ -0.98
NEDD9-208ENST00000504387 MLH3Q9UHC1 1453 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 KIF13AQ9H1H9 1805 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 POLR3DP05423 398 aaPredicted RBP8.93□□□□□ -0.98
NEDD9-208ENST00000504387 PDIA4P13667 645 aaKnown RBP8.93□□□□□ -0.98
NEDD9-208ENST00000504387 PIP4K2AP48426 406 aaPredicted RBP8.93□□□□□ -0.98
NEDD9-208ENST00000504387 RAD51AP2Q09MP3 1159 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 TEX35Q5T0J7 233 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 UBXN4Q92575 508 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 KIF1BPQ96EK5 621 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 CARD6Q9BX69 1037 aa8.93□□□□□ -0.98
NEDD9-208ENST00000504387 SCAND2PQ9GZW5 306 aaPredicted RBP8.93□□□□□ -0.98
NEDD9-208ENST00000504387 PLEKHA4Q9H4M7 779 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms