RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 MYO19Q96H55 970 aa7.22□□□□□ -1.25
PDLIM1P4-201ENST00000504327 ARID3AQ99856 593 aa7.22□□□□□ -1.25
PDLIM1P4-201ENST00000504327 LRFN2Q9ULH4 789 aa7.22□□□□□ -1.25
PDLIM1P4-201ENST00000504327 KCNQ4P56696 695 aa7.21□□□□□ -1.26
PDLIM1P4-201ENST00000504327 SAP130Q9H0E3 1048 aa7.21□□□□□ -1.26
PDLIM1P4-201ENST00000504327 AVENQ9NQS1 362 aaPredicted RBP7.21□□□□□ -1.26
PDLIM1P4-201ENST00000504327 DMGDHQ9UI17 866 aaKnown RBP7.21□□□□□ -1.26
PDLIM1P4-201ENST00000504327 KCNH4Q9UQ05 1017 aa7.21□□□□□ -1.26
PDLIM1P4-201ENST00000504327 CNTNAP5Q8WYK1 1306 aa7.21□□□□□ -1.26
PDLIM1P4-201ENST00000504327 RNF225M0QZC1 329 aaPredicted RBP7.2□□□□□ -1.26
PDLIM1P4-201ENST00000504327 PPP1R15AO75807 674 aaPredicted RBP7.2□□□□□ -1.26
PDLIM1P4-201ENST00000504327 AMPD1P23109 780 aa7.2□□□□□ -1.26
PDLIM1P4-201ENST00000504327 ATP2B4P23634 1241 aa7.2□□□□□ -1.26
PDLIM1P4-201ENST00000504327 GRNP28799 593 aaKnown RBP7.2□□□□□ -1.26
PDLIM1P4-201ENST00000504327 GSK3AP49840 483 aa7.2□□□□□ -1.26
PDLIM1P4-201ENST00000504327 IDH3AP50213 366 aa7.2□□□□□ -1.26
PDLIM1P4-201ENST00000504327 COX20Q5RI15 118 aa7.2□□□□□ -1.26
PDLIM1P4-201ENST00000504327 CARNS1A5YM72 827 aa7.19□□□□□ -1.26
PDLIM1P4-201ENST00000504327 TMEM88BA6NKF7 163 aa7.19□□□□□ -1.26
PDLIM1P4-201ENST00000504327 IRS1P35568 1242 aa7.19□□□□□ -1.26
PDLIM1P4-201ENST00000504327 SNRPNP63162 240 aaKnown RBP7.19□□□□□ -1.26
PDLIM1P4-201ENST00000504327 KCNMA1Q12791 1236 aa7.19□□□□□ -1.26
PDLIM1P4-201ENST00000504327 C11orf91Q3C1V1 193 aa7.19□□□□□ -1.26
PDLIM1P4-201ENST00000504327 SCARF2Q96GP6 870 aaPredicted RBP7.19□□□□□ -1.26
PDLIM1P4-201ENST00000504327 RRAGCQ9HB90 399 aa7.19□□□□□ -1.26
PDLIM1P4-201ENST00000504327 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.19□□□□□ -1.26
PDLIM1P4-201ENST00000504327 MICAL2O94851 1124 aa7.18□□□□□ -1.26
PDLIM1P4-201ENST00000504327 NAA30Q147X3 362 aaPredicted RBP7.18□□□□□ -1.26
PDLIM1P4-201ENST00000504327 C16orf46Q6P387 395 aa7.18□□□□□ -1.26
PDLIM1P4-201ENST00000504327 BHMTQ93088 406 aa7.18□□□□□ -1.26
PDLIM1P4-201ENST00000504327 COL26A1Q96A83 441 aa7.18□□□□□ -1.26
PDLIM1P4-201ENST00000504327 IFT43Q96FT9 208 aa7.18□□□□□ -1.26
PDLIM1P4-201ENST00000504327 BTBD6Q96KE9 485 aa7.18□□□□□ -1.26
PDLIM1P4-201ENST00000504327 SIN3BO75182 1162 aa7.17□□□□□ -1.26
PDLIM1P4-201ENST00000504327 HOXB4P17483 251 aaPredicted RBP7.17□□□□□ -1.26
PDLIM1P4-201ENST00000504327 INPP5BP32019 993 aa7.17□□□□□ -1.26
PDLIM1P4-201ENST00000504327 SCNN1AP37088 669 aa7.17□□□□□ -1.26
PDLIM1P4-201ENST00000504327 ARSDP51689 593 aa7.17□□□□□ -1.26
PDLIM1P4-201ENST00000504327 CHSY3Q70JA7 882 aa7.17□□□□□ -1.26
PDLIM1P4-201ENST00000504327 PODNQ7Z5L7 613 aa7.17□□□□□ -1.26
PDLIM1P4-201ENST00000504327 USP20Q9Y2K6 914 aa7.17□□□□□ -1.26
PDLIM1P4-201ENST00000504327 ELOA3CA0A087WX78 387 aaPredicted RBP7.16□□□□□ -1.26
PDLIM1P4-201ENST00000504327 ELOA3DA6NLF2 546 aaPredicted RBP7.16□□□□□ -1.26
PDLIM1P4-201ENST00000504327 TNFRSF10BO14763 440 aa7.16□□□□□ -1.26
PDLIM1P4-201ENST00000504327 PTCD1O75127 700 aaKnown RBP7.16□□□□□ -1.26
PDLIM1P4-201ENST00000504327 EPB42P16452 691 aa7.16□□□□□ -1.26
PDLIM1P4-201ENST00000504327 RASSF7Q02833 373 aa7.16□□□□□ -1.26
PDLIM1P4-201ENST00000504327 ELOA3BQ3SY89 546 aa7.16□□□□□ -1.26
PDLIM1P4-201ENST00000504327 FAM26DQ5JW98 314 aa7.16□□□□□ -1.26
PDLIM1P4-201ENST00000504327 TREML1Q86YW5 311 aa7.16□□□□□ -1.26
PDLIM1P4-201ENST00000504327 ELOA3Q8NG57 546 aa7.16□□□□□ -1.26
PDLIM1P4-201ENST00000504327 MDFIQ99750 246 aa7.16□□□□□ -1.26
PDLIM1P4-201ENST00000504327 SEPT3Q9UH03 358 aa7.16□□□□□ -1.26
PDLIM1P4-201ENST00000504327 DGKGP49619 791 aa7.15□□□□□ -1.26
PDLIM1P4-201ENST00000504327 TBC1D8BQ0IIM8 1120 aa7.15□□□□□ -1.26
PDLIM1P4-201ENST00000504327 NEUROD1Q13562 356 aa7.15□□□□□ -1.26
PDLIM1P4-201ENST00000504327 ETFBKMTQ8IXQ9 262 aa7.15□□□□□ -1.26
PDLIM1P4-201ENST00000504327 BEND7Q8N7W2 519 aaPredicted RBP7.15□□□□□ -1.26
PDLIM1P4-201ENST00000504327 GSX2Q9BZM3 304 aa7.15□□□□□ -1.26
PDLIM1P4-201ENST00000504327 PHF20L1A8MW92 1017 aa7.14□□□□□ -1.27
PDLIM1P4-201ENST00000504327 OPLAHO14841 1288 aa7.14□□□□□ -1.27
PDLIM1P4-201ENST00000504327 NFKB1P19838 968 aa7.14□□□□□ -1.27
PDLIM1P4-201ENST00000504327 ADH7P40394 386 aa7.14□□□□□ -1.27
PDLIM1P4-201ENST00000504327 KRT25Q7Z3Z0 450 aa7.14□□□□□ -1.27
PDLIM1P4-201ENST00000504327 RGL4Q8IZJ4 473 aa7.14□□□□□ -1.27
PDLIM1P4-201ENST00000504327 TNFRSF25Q93038 417 aa7.14□□□□□ -1.27
PDLIM1P4-201ENST00000504327 PNMA5Q96PV4 448 aa7.14□□□□□ -1.27
PDLIM1P4-201ENST00000504327 MKL2Q9ULH7 1088 aa7.14□□□□□ -1.27
PDLIM1P4-201ENST00000504327 ADARB2-AS1A8MUL3 147 aa7.13□□□□□ -1.27
PDLIM1P4-201ENST00000504327 GDF11O95390 407 aa7.13□□□□□ -1.27
PDLIM1P4-201ENST00000504327 BRD2P25440 801 aaKnown RBP7.13□□□□□ -1.27
PDLIM1P4-201ENST00000504327 CCINQ13939 588 aa7.13□□□□□ -1.27
PDLIM1P4-201ENST00000504327 KANK3Q6NY19 840 aa7.13□□□□□ -1.27
PDLIM1P4-201ENST00000504327 UBE2OQ9C0C9 1292 aaKnown RBP7.13□□□□□ -1.27
PDLIM1P4-201ENST00000504327 RTCBQ9Y3I0 505 aaKnown RBP7.13□□□□□ -1.27
PDLIM1P4-201ENST00000504327 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.13□□□□□ -1.27
PDLIM1P4-201ENST00000504327 TRIM26Q12899 539 aaPredicted RBP7.12□□□□□ -1.27
PDLIM1P4-201ENST00000504327 LINC00114Q6XXX2 140 aa7.12□□□□□ -1.27
PDLIM1P4-201ENST00000504327 TMEM151AQ8N4L1 468 aa7.12□□□□□ -1.27
PDLIM1P4-201ENST00000504327 IGFLR1Q9H665 355 aa7.12□□□□□ -1.27
PDLIM1P4-201ENST00000504327 ALBP02768 609 aa7.11□□□□□ -1.27
PDLIM1P4-201ENST00000504327 ALAS2P22557 587 aa7.11□□□□□ -1.27
PDLIM1P4-201ENST00000504327 SSFA2P28290 1259 aa7.11□□□□□ -1.27
PDLIM1P4-201ENST00000504327 CMTR1Q8N1G2 835 aaKnown RBP7.11□□□□□ -1.27
PDLIM1P4-201ENST00000504327 SUV39H2Q9H5I1 410 aa7.11□□□□□ -1.27
PDLIM1P4-201ENST00000504327 ZFATQ9P243 1243 aa7.11□□□□□ -1.27
PDLIM1P4-201ENST00000504327 STARD13Q9Y3M8 1113 aa7.11□□□□□ -1.27
PDLIM1P4-201ENST00000504327 SASH3O75995 380 aa7.1□□□□□ -1.27
PDLIM1P4-201ENST00000504327 TARSP26639 723 aaKnown RBP7.1□□□□□ -1.27
PDLIM1P4-201ENST00000504327 COL8A1P27658 744 aa7.1□□□□□ -1.27
PDLIM1P4-201ENST00000504327 TRIP4Q15650 581 aaPredicted RBP7.1□□□□□ -1.27
PDLIM1P4-201ENST00000504327 KCTD17Q8N5Z5 321 aa7.1□□□□□ -1.27
PDLIM1P4-201ENST00000504327 DNAJB12Q9NXW2 375 aaKnown RBP7.1□□□□□ -1.27
PDLIM1P4-201ENST00000504327 STIM2Q9P246 746 aa7.1□□□□□ -1.27
PDLIM1P4-201ENST00000504327 SLC6A14Q9UN76 642 aa7.1□□□□□ -1.27
PDLIM1P4-201ENST00000504327 KCNMB2Q9Y691 235 aa7.1□□□□□ -1.27
PDLIM1P4-201ENST00000504327 M0R082 166 aa7.09□□□□□ -1.27
PDLIM1P4-201ENST00000504327 GNB5O14775 395 aa7.09□□□□□ -1.27
PDLIM1P4-201ENST00000504327 ZBTB39O15060 712 aa7.09□□□□□ -1.27
PDLIM1P4-201ENST00000504327 XYLBO75191 536 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms