RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 HEG1Q9ULI3 1381 aa17.19■□□□□ 0.34
LSM6-204ENST00000504181 A1BGP04217 495 aa17.19■□□□□ 0.34
LSM6-204ENST00000504181 FAM177BA6PVY3 158 aa17.18■□□□□ 0.34
LSM6-204ENST00000504181 FAM155AB1AL88 458 aaPredicted RBP17.18■□□□□ 0.34
LSM6-204ENST00000504181 KIF23Q02241 960 aaPredicted RBP17.18■□□□□ 0.34
LSM6-204ENST00000504181 ZNF496Q96IT1 587 aaPredicted RBP17.18■□□□□ 0.34
LSM6-204ENST00000504181 PAPPA2Q9BXP8 1791 aa17.17■□□□□ 0.34
LSM6-204ENST00000504181 FXR1P51114 621 aaKnown RBP eCLIP17.17■□□□□ 0.34
LSM6-204ENST00000504181 NIM1KQ8IY84 436 aa17.17■□□□□ 0.34
LSM6-204ENST00000504181 RBBP6Q7Z6E9 1792 aaKnown RBP17.16■□□□□ 0.34
LSM6-204ENST00000504181 RGMBQ6NW40 437 aa17.16■□□□□ 0.34
LSM6-204ENST00000504181 TEX13AQ9BXU3 409 aaPredicted RBP17.16■□□□□ 0.34
LSM6-204ENST00000504181 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
LSM6-204ENST00000504181 DLK2Q6UY11 383 aa17.15■□□□□ 0.34
LSM6-204ENST00000504181 TPTE2Q6XPS3 522 aa17.15■□□□□ 0.34
LSM6-204ENST00000504181 CDC37L1Q7L3B6 337 aa17.15■□□□□ 0.34
LSM6-204ENST00000504181 SLC51AQ86UW1 340 aa17.15■□□□□ 0.34
LSM6-204ENST00000504181 PGAP2Q9UHJ9 254 aa17.15■□□□□ 0.34
LSM6-204ENST00000504181 NPC1L1Q9UHC9 1359 aa17.14■□□□□ 0.33
LSM6-204ENST00000504181 GMPSP49915 693 aaPredicted RBP17.13■□□□□ 0.33
LSM6-204ENST00000504181 HIRAP54198 1017 aaPredicted RBP17.13■□□□□ 0.33
LSM6-204ENST00000504181 CC2D2BQ6DHV5 1058 aa17.13■□□□□ 0.33
LSM6-204ENST00000504181 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
LSM6-204ENST00000504181 ZNF652Q9Y2D9 606 aa17.13■□□□□ 0.33
LSM6-204ENST00000504181 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
LSM6-204ENST00000504181 PPIP5K2O43314 1243 aa17.12■□□□□ 0.33
LSM6-204ENST00000504181 AOC3Q16853 763 aa17.12■□□□□ 0.33
LSM6-204ENST00000504181 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
LSM6-204ENST00000504181 CLEC4GQ6UXB4 293 aa17.12■□□□□ 0.33
LSM6-204ENST00000504181 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
LSM6-204ENST00000504181 TRPM4Q8TD43 1214 aa17.12■□□□□ 0.33
LSM6-204ENST00000504181 TCERG1O14776 1098 aaKnown RBP17.11■□□□□ 0.33
LSM6-204ENST00000504181 IL13P35225 146 aa17.11■□□□□ 0.33
LSM6-204ENST00000504181 ZNF157P51786 506 aaPredicted RBP17.11■□□□□ 0.33
LSM6-204ENST00000504181 PKN2Q16513 984 aaKnown RBP17.11■□□□□ 0.33
LSM6-204ENST00000504181 MTHFSDQ2M296 383 aaKnown RBP17.11■□□□□ 0.33
LSM6-204ENST00000504181 ZC3H15Q8WU90 426 aaKnown RBP17.11■□□□□ 0.33
LSM6-204ENST00000504181 CCDC102AQ96A19 550 aa17.11■□□□□ 0.33
LSM6-204ENST00000504181 HMOX1P09601 288 aa17.1■□□□□ 0.33
LSM6-204ENST00000504181 GTF2E1P29083 439 aaPredicted RBP17.1■□□□□ 0.33
LSM6-204ENST00000504181 CXCL9Q07325 125 aa17.1■□□□□ 0.33
LSM6-204ENST00000504181 CSRNP1Q96S65 589 aa17.1■□□□□ 0.33
LSM6-204ENST00000504181 GBA2Q9HCG7 927 aaPredicted RBP17.1■□□□□ 0.33
LSM6-204ENST00000504181 HDAC9Q9UKV0 1011 aa17.1■□□□□ 0.33
LSM6-204ENST00000504181 ABCC12Q96J65 1359 aa17.1■□□□□ 0.33
LSM6-204ENST00000504181 LAMB2P55268 1798 aa17.1■□□□□ 0.33
LSM6-204ENST00000504181 DLL1O00548 723 aa17.09■□□□□ 0.33
LSM6-204ENST00000504181 C2orf69Q8N8R5 385 aa17.09■□□□□ 0.33
LSM6-204ENST00000504181 FMNL2Q96PY5 1086 aa17.09■□□□□ 0.33
LSM6-204ENST00000504181 BCL2L13Q9BXK5 485 aa17.09■□□□□ 0.33
LSM6-204ENST00000504181 SHTN1A0MZ66 631 aa17.08■□□□□ 0.32
LSM6-204ENST00000504181 HOXD11P31277 338 aaPredicted RBP17.08■□□□□ 0.32
LSM6-204ENST00000504181 CRY2Q49AN0 593 aa17.08■□□□□ 0.32
LSM6-204ENST00000504181 RPGRQ92834 1020 aaKnown RBP17.08■□□□□ 0.32
LSM6-204ENST00000504181 POLR3GLQ9BT43 218 aa17.08■□□□□ 0.32
LSM6-204ENST00000504181 CENPFP49454 3210 aa17.08■□□□□ 0.32
LSM6-204ENST00000504181 TAF1P21675 1872 aa17.07■□□□□ 0.32
LSM6-204ENST00000504181 CDHR2Q9BYE9 1310 aa17.07■□□□□ 0.32
LSM6-204ENST00000504181 SLC10A3P09131 477 aa17.07■□□□□ 0.32
LSM6-204ENST00000504181 TEFQ10587 303 aa17.07■□□□□ 0.32
LSM6-204ENST00000504181 ZNRF3Q9ULT6 936 aa17.07■□□□□ 0.32
LSM6-204ENST00000504181 LAMB4A4D0S4 1761 aa17.07■□□□□ 0.32
LSM6-204ENST00000504181 RIC1Q4ADV7 1423 aa17.06■□□□□ 0.32
LSM6-204ENST00000504181 TRIOBPQ9H2D6 2365 aa17.06■□□□□ 0.32
LSM6-204ENST00000504181 PPEF1O14829 653 aaPredicted RBP17.06■□□□□ 0.32
LSM6-204ENST00000504181 GRIPAP1Q4V328 841 aa17.06■□□□□ 0.32
LSM6-204ENST00000504181 NUTM1Q86Y26 1132 aa17.06■□□□□ 0.32
LSM6-204ENST00000504181 ZNF296Q8WUU4 475 aaPredicted RBP17.06■□□□□ 0.32
LSM6-204ENST00000504181 HTTP42858 3142 aa17.05■□□□□ 0.32
LSM6-204ENST00000504181 CEP290O15078 2479 aa17.05■□□□□ 0.32
LSM6-204ENST00000504181 RAD17O75943 681 aa17.05■□□□□ 0.32
LSM6-204ENST00000504181 CNOT7Q9UIV1 285 aaKnown RBP17.05■□□□□ 0.32
LSM6-204ENST00000504181 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
LSM6-204ENST00000504181 KIAA0100Q14667 2235 aaKnown RBP17.05■□□□□ 0.32
LSM6-204ENST00000504181 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
LSM6-204ENST00000504181 FBXO46Q6PJ61 603 aaPredicted RBP17.04■□□□□ 0.32
LSM6-204ENST00000504181 KRT26Q7Z3Y9 468 aa17.04■□□□□ 0.32
LSM6-204ENST00000504181 MORC1Q86VD1 984 aa17.04■□□□□ 0.32
LSM6-204ENST00000504181 PRAMEF22A3QJZ6 481 aa17.03■□□□□ 0.32
LSM6-204ENST00000504181 ADM5C9JUS6 153 aa17.03■□□□□ 0.32
LSM6-204ENST00000504181 KCNQ3O43525 872 aa17.03■□□□□ 0.32
LSM6-204ENST00000504181 TBC1D8O95759 1140 aa17.03■□□□□ 0.32
LSM6-204ENST00000504181 HLFQ16534 295 aa17.03■□□□□ 0.32
LSM6-204ENST00000504181 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
LSM6-204ENST00000504181 DDX60Q8IY21 1712 aaKnown RBP17.03■□□□□ 0.32
LSM6-204ENST00000504181 ANKRD36CQ5JPF3 1778 aa17.02■□□□□ 0.32
LSM6-204ENST00000504181 H7C1D1 291 aa17.02■□□□□ 0.32
LSM6-204ENST00000504181 HOXA10P31260 410 aaPredicted RBP17.02■□□□□ 0.32
LSM6-204ENST00000504181 MICALL2Q8IY33 904 aa17.02■□□□□ 0.32
LSM6-204ENST00000504181 IL17REQ8NFR9 667 aa17.02■□□□□ 0.32
LSM6-204ENST00000504181 BRCA2P51587 3418 aa17.02■□□□□ 0.31
LSM6-204ENST00000504181 KIF7Q2M1P5 1343 aa17.01■□□□□ 0.31
LSM6-204ENST00000504181 TNIP1Q15025 636 aa17.01■□□□□ 0.31
LSM6-204ENST00000504181 SAMD7Q7Z3H4 446 aa17.01■□□□□ 0.31
LSM6-204ENST00000504181 RASAL3Q86YV0 1011 aa17.01■□□□□ 0.31
LSM6-204ENST00000504181 RBM17Q96I25 401 aaKnown RBP17.01■□□□□ 0.31
LSM6-204ENST00000504181 NYXQ9GZU5 481 aa17.01■□□□□ 0.31
LSM6-204ENST00000504181 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
LSM6-204ENST00000504181 CUL9Q8IWT3 2517 aa17.01■□□□□ 0.31
LSM6-204ENST00000504181 POTEFA5A3E0 1075 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms