RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 CCDC151A5D8V7 595 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 MPHOSPH10O00566 681 aaKnown RBP6.96□□□□□ -1.3
LINC01340-201ENST00000504012 SRGAP3O43295 1099 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 COQ9O75208 318 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 ZSCAN22P10073 491 aaPredicted RBP6.96□□□□□ -1.3
LINC01340-201ENST00000504012 CHGAP10645 457 aaKnown RBP6.96□□□□□ -1.3
LINC01340-201ENST00000504012 SKILP12757 684 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 HNRNPH1P31943 449 aaKnown RBP6.96□□□□□ -1.3
LINC01340-201ENST00000504012 ELF1P32519 619 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 MNAT1P51948 309 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 RWDD2BP57060 319 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 LRMPQ12912 555 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 BIRC2Q13490 618 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 SNW1Q13573 536 aaKnown RBP6.96□□□□□ -1.3
LINC01340-201ENST00000504012 TUBB2AQ13885 445 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 PPP2R5AQ15172 486 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 E2F4Q16254 413 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 MAP3K11Q16584 847 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 ZC3H12AQ5D1E8 599 aaKnown RBP6.96□□□□□ -1.3
LINC01340-201ENST00000504012 SPATS2Q86XZ4 545 aaKnown RBP6.96□□□□□ -1.3
LINC01340-201ENST00000504012 ITPRIPQ8IWB1 547 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 PLEKHM2Q8IWE5 1019 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 MAGEC3Q8TD91 643 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 TCP11Q8WWU5 503 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 RABGGTAQ92696 567 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 TUBB2BQ9BVA1 445 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 TRIM5Q9C035 493 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 OSBPL5Q9H0X9 879 aaPredicted RBP6.96□□□□□ -1.3
LINC01340-201ENST00000504012 NUCKS1Q9H1E3 243 aaKnown RBP6.96□□□□□ -1.3
LINC01340-201ENST00000504012 VEZTQ9HBM0 779 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 DNAI1Q9UI46 699 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 EXOC6BQ9Y2D4 811 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 WDR62O43379 1518 aa6.96□□□□□ -1.3
LINC01340-201ENST00000504012 PPIP5K1Q6PFW1 1433 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 A6NNZ2 444 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 ERC2O15083 957 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 CHUKO15111 745 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 ZBTB7BO15156 539 aaPredicted RBP6.95□□□□□ -1.3
LINC01340-201ENST00000504012 NRDCO43847 1150 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 ERLIN2O94905 339 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 PRKAR2AP13861 404 aaKnown RBP6.95□□□□□ -1.3
LINC01340-201ENST00000504012 USP5P45974 858 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 ETF1P62495 437 aaKnown RBP6.95□□□□□ -1.3
LINC01340-201ENST00000504012 CCZ1BP86790 482 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 CCZ1P86791 482 aaPredicted RBP6.95□□□□□ -1.3
LINC01340-201ENST00000504012 TYRO3Q06418 890 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 MTA1Q13330 715 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 TUBB8Q3ZCM7 444 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 PREPLQ4J6C6 727 aaPredicted RBP6.95□□□□□ -1.3
LINC01340-201ENST00000504012 GBP6Q6ZN66 633 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 NOL8Q76FK4 1167 aaKnown RBP6.95□□□□□ -1.3
LINC01340-201ENST00000504012 FCHSD1Q86WN1 690 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 TCP11L2Q8N4U5 519 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 ARMC2Q8NEN0 867 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 BICD2Q8TD16 824 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 BORCS6Q96GS4 357 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 MPHOSPH8Q99549 860 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 TMX4Q9H1E5 349 aaPredicted RBP6.95□□□□□ -1.3
LINC01340-201ENST00000504012 ACBD3Q9H3P7 528 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 CBX8Q9HC52 389 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 DDX19AQ9NUU7 478 aaKnown RBP6.95□□□□□ -1.3
LINC01340-201ENST00000504012 ETAA1Q9NY74 926 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 MCM8Q9UJA3 840 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 CLEC11AQ9Y240 323 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 SPAG9O60271 1321 aaKnown RBP6.95□□□□□ -1.3
LINC01340-201ENST00000504012 TTC21BQ7Z4L5 1316 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 BICRAQ9NZM4 1560 aa6.95□□□□□ -1.3
LINC01340-201ENST00000504012 PPRC1Q5VV67 1664 aaKnown RBP6.94□□□□□ -1.3
LINC01340-201ENST00000504012 A6NJR5 290 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 SMARCA5O60264 1052 aaPredicted RBP6.94□□□□□ -1.3
LINC01340-201ENST00000504012 GPTP24298 496 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 APOBRQ0VD83 1088 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 WLSQ5T9L3 541 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 LRRC31Q6UY01 552 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 RSRC2Q7L4I2 434 aaKnown RBP6.94□□□□□ -1.3
LINC01340-201ENST00000504012 HDXQ7Z353 690 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 ANKRD23Q86SG2 305 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 AMOTL1Q8IY63 956 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 TMEM57Q8N5G2 664 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 PRPF38AQ8NAV1 312 aaKnown RBP6.94□□□□□ -1.3
LINC01340-201ENST00000504012 CCDC150Q8NCX0 1101 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 SPDYE1Q8NFV5 336 aaPredicted RBP6.94□□□□□ -1.3
LINC01340-201ENST00000504012 FAM71BQ8TC56 605 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 SRCIN1Q9C0H9 1055 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 OSBPL3Q9H4L5 887 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 DCTPP1Q9H773 170 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 HOMER3Q9NSC5 361 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 ADGRB2O60241 1585 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 NUP155O75694 1391 aa6.94□□□□□ -1.3
LINC01340-201ENST00000504012 IQGAP1P46940 1657 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 SHPRHQ149N8 1683 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 FAM135BQ49AJ0 1406 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 ERCC6Q03468 1493 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 PES1O00541 588 aaKnown RBP6.93□□□□□ -1.3
LINC01340-201ENST00000504012 RTN2O75298 545 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 SASH3O75995 380 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 GSPT1P15170 499 aaKnown RBP6.93□□□□□ -1.3
LINC01340-201ENST00000504012 PRPHP41219 470 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 NEK4P51957 841 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 INHBEP58166 350 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms