RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 RTL5Q5HYW3 569 aaPredicted RBP26.06■■□□□ 1.76
UBE2D3-216ENST00000503742 SYTL4Q96C24 671 aaPredicted RBP26.06■■□□□ 1.76
UBE2D3-216ENST00000503742 MAP4K4O95819 1239 aaPredicted RBP26.05■■□□□ 1.76
UBE2D3-216ENST00000503742 TRIM28Q13263 835 aaKnown RBP26.05■■□□□ 1.76
UBE2D3-216ENST00000503742 MARCH10Q8NA82 808 aaPredicted RBP26.04■■□□□ 1.76
UBE2D3-216ENST00000503742 LMBR1LQ6UX01 489 aa26.04■■□□□ 1.76
UBE2D3-216ENST00000503742 KIF6Q6ZMV9 814 aa26.04■■□□□ 1.76
UBE2D3-216ENST00000503742 EPB41L2O43491 1005 aaKnown RBP26.02■■□□□ 1.76
UBE2D3-216ENST00000503742 SPRYD3Q8NCJ5 442 aa26.02■■□□□ 1.76
UBE2D3-216ENST00000503742 MAP3K15Q6ZN16 1313 aa26.02■■□□□ 1.76
UBE2D3-216ENST00000503742 CCDC8Q9H0W5 538 aaPredicted RBP26.01■■□□□ 1.75
UBE2D3-216ENST00000503742 ZNF330Q9Y3S2 320 aaPredicted RBP26.01■■□□□ 1.75
UBE2D3-216ENST00000503742 K7ELQ4 463 aaPredicted RBP26■■□□□ 1.75
UBE2D3-216ENST00000503742 IL25Q9H293 177 aa26■■□□□ 1.75
UBE2D3-216ENST00000503742 JCADQ9P266 1359 aa26■■□□□ 1.75
UBE2D3-216ENST00000503742 GIGYF2Q6Y7W6 1299 aaKnown RBP25.99■■□□□ 1.75
UBE2D3-216ENST00000503742 TLR7Q9NYK1 1049 aaKnown RBP25.99■■□□□ 1.75
UBE2D3-216ENST00000503742 ZBTB1Q9Y2K1 713 aa25.99■■□□□ 1.75
UBE2D3-216ENST00000503742 DDIT3P35638 169 aa25.98■■□□□ 1.75
UBE2D3-216ENST00000503742 CCDC9Q9Y3X0 531 aaKnown RBP25.98■■□□□ 1.75
UBE2D3-216ENST00000503742 SGSM2O43147 1006 aa25.98■■□□□ 1.75
UBE2D3-216ENST00000503742 IL17RAQ96F46 866 aa25.98■■□□□ 1.75
UBE2D3-216ENST00000503742 ANO2Q9NQ90 1003 aa25.98■■□□□ 1.75
UBE2D3-216ENST00000503742 BCL9LQ86UU0 1499 aa25.97■■□□□ 1.75
UBE2D3-216ENST00000503742 TFCP2Q12800 502 aa25.96■■□□□ 1.75
UBE2D3-216ENST00000503742 TNNI3KQ59H18 835 aa25.96■■□□□ 1.75
UBE2D3-216ENST00000503742 EVI5LQ96CN4 794 aa25.96■■□□□ 1.75
UBE2D3-216ENST00000503742 FPGT-TNNI3KV9GXZ4 949 aa25.96■■□□□ 1.75
UBE2D3-216ENST00000503742 CICQ96RK0 1608 aaPredicted RBP25.96■■□□□ 1.75
UBE2D3-216ENST00000503742 ANKRD36CQ5JPF3 1778 aa25.96■■□□□ 1.75
UBE2D3-216ENST00000503742 IL6STP40189 918 aaPredicted RBP25.96■■□□□ 1.75
UBE2D3-216ENST00000503742 CHMP5Q9NZZ3 219 aa25.96■■□□□ 1.75
UBE2D3-216ENST00000503742 PCCAP05165 728 aaPredicted RBP25.95■■□□□ 1.75
UBE2D3-216ENST00000503742 ANAPC15P60006 121 aa25.95■■□□□ 1.75
UBE2D3-216ENST00000503742 ACSBG1Q96GR2 724 aa25.95■■□□□ 1.75
UBE2D3-216ENST00000503742 FRAT2O75474 233 aaPredicted RBP25.95■■□□□ 1.74
UBE2D3-216ENST00000503742 MCCP23508 829 aa25.95■■□□□ 1.74
UBE2D3-216ENST00000503742 VPS72Q15906 364 aa25.95■■□□□ 1.74
UBE2D3-216ENST00000503742 HLFQ16534 295 aa25.95■■□□□ 1.74
UBE2D3-216ENST00000503742 PLA2G12BQ9BX93 195 aa25.95■■□□□ 1.74
UBE2D3-216ENST00000503742 CHMP3Q9Y3E7 222 aa25.95■■□□□ 1.74
UBE2D3-216ENST00000503742 HSP90AB3PQ58FF7 597 aa25.94■■□□□ 1.74
UBE2D3-216ENST00000503742 ATG9AQ7Z3C6 839 aa25.94■■□□□ 1.74
UBE2D3-216ENST00000503742 ZBTB38Q8NAP3 1195 aaPredicted RBP25.93■■□□□ 1.74
UBE2D3-216ENST00000503742 DBNLQ9UJU6 430 aaKnown RBP25.93■■□□□ 1.74
UBE2D3-216ENST00000503742 C8orf37Q96NL8 207 aa25.93■■□□□ 1.74
UBE2D3-216ENST00000503742 NUP98P52948 1817 aa25.92■■□□□ 1.74
UBE2D3-216ENST00000503742 RREB1Q92766 1687 aa25.92■■□□□ 1.74
UBE2D3-216ENST00000503742 ERVV-1B6SEH8 477 aa25.92■■□□□ 1.74
UBE2D3-216ENST00000503742 NGLY1Q96IV0 654 aa25.92■■□□□ 1.74
UBE2D3-216ENST00000503742 PALD1Q9ULE6 856 aa25.92■■□□□ 1.74
UBE2D3-216ENST00000503742 NLRP10Q86W26 655 aa25.91■■□□□ 1.74
UBE2D3-216ENST00000503742 FNBP4Q8N3X1 1017 aaPredicted RBP25.91■■□□□ 1.74
UBE2D3-216ENST00000503742 LSG1Q9H089 658 aaKnown RBP25.91■■□□□ 1.74
UBE2D3-216ENST00000503742 RAD50Q92878 1312 aa25.91■■□□□ 1.74
UBE2D3-216ENST00000503742 ST18O60284 1047 aa25.91■■□□□ 1.74
UBE2D3-216ENST00000503742 ARXQ96QS3 562 aa25.91■■□□□ 1.74
UBE2D3-216ENST00000503742 CDHR2Q9BYE9 1310 aa25.9■■□□□ 1.74
UBE2D3-216ENST00000503742 ATP5JP18859 108 aa25.9■■□□□ 1.74
UBE2D3-216ENST00000503742 HSPA4P34932 840 aa25.9■■□□□ 1.74
UBE2D3-216ENST00000503742 IL15P40933 162 aaPredicted RBP25.9■■□□□ 1.74
UBE2D3-216ENST00000503742 INTS5Q6P9B9 1019 aaKnown RBP25.9■■□□□ 1.74
UBE2D3-216ENST00000503742 CWC27Q6UX04 472 aaKnown RBP25.9■■□□□ 1.74
UBE2D3-216ENST00000503742 FAM89AQ96GI7 184 aa25.9■■□□□ 1.74
UBE2D3-216ENST00000503742 BOLA2Q9H3K6 86 aa25.9■■□□□ 1.74
UBE2D3-216ENST00000503742 GPR108Q9NPR9 543 aa25.9■■□□□ 1.74
UBE2D3-216ENST00000503742 DIAPH3Q9NSV4 1193 aa25.9■■□□□ 1.74
UBE2D3-216ENST00000503742 LOC102724428A0A0B4J2F2 783 aa25.89■■□□□ 1.74
UBE2D3-216ENST00000503742 EYA2O00167 538 aa25.89■■□□□ 1.74
UBE2D3-216ENST00000503742 EIF5P55010 431 aaKnown RBP25.89■■□□□ 1.74
UBE2D3-216ENST00000503742 SIK1P57059 783 aa25.89■■□□□ 1.74
UBE2D3-216ENST00000503742 FAM98CQ17RN3 349 aaKnown RBP25.89■■□□□ 1.74
UBE2D3-216ENST00000503742 RUFY2Q8WXA3 655 aa25.89■■□□□ 1.74
UBE2D3-216ENST00000503742 CIZ1Q9ULV3 898 aaPredicted RBP25.89■■□□□ 1.74
UBE2D3-216ENST00000503742 CIAO1O76071 339 aa25.89■■□□□ 1.73
UBE2D3-216ENST00000503742 CSF1RP07333 972 aa25.89■■□□□ 1.73
UBE2D3-216ENST00000503742 ATP6V1AP38606 617 aa25.88■■□□□ 1.73
UBE2D3-216ENST00000503742 DZIP3Q86Y13 1208 aaKnown RBP25.88■■□□□ 1.73
UBE2D3-216ENST00000503742 CCDC87Q9NVE4 849 aa25.88■■□□□ 1.73
UBE2D3-216ENST00000503742 HIP1O00291 1037 aa25.87■■□□□ 1.73
UBE2D3-216ENST00000503742 SPATA31A6Q5VVP1 1343 aa25.87■■□□□ 1.73
UBE2D3-216ENST00000503742 DEKP35659 375 aaKnown RBP25.87■■□□□ 1.73
UBE2D3-216ENST00000503742 ZNF594Q96JF6 807 aaPredicted RBP25.87■■□□□ 1.73
UBE2D3-216ENST00000503742 DBNDD2Q9BQY9 259 aa25.87■■□□□ 1.73
UBE2D3-216ENST00000503742 PALLDQ8WX93 1383 aa25.87■■□□□ 1.73
UBE2D3-216ENST00000503742 A0A0G2JS52 829 aa25.86■■□□□ 1.73
UBE2D3-216ENST00000503742 GPTP24298 496 aa25.86■■□□□ 1.73
UBE2D3-216ENST00000503742 ITPK1Q13572 414 aa25.86■■□□□ 1.73
UBE2D3-216ENST00000503742 LRRC24Q50LG9 513 aa25.86■■□□□ 1.73
UBE2D3-216ENST00000503742 FBXO3Q9UK99 471 aa25.86■■□□□ 1.73
UBE2D3-216ENST00000503742 TBC1D2BQ9UPU7 963 aa25.86■■□□□ 1.73
UBE2D3-216ENST00000503742 CRKLP46109 303 aaKnown RBP25.86■■□□□ 1.73
UBE2D3-216ENST00000503742 SMARCC1Q92922 1105 aaPredicted RBP25.86■■□□□ 1.73
UBE2D3-216ENST00000503742 SNRKQ9NRH2 765 aa25.86■■□□□ 1.73
UBE2D3-216ENST00000503742 MYH14Q7Z406 1995 aaKnown RBP25.85■■□□□ 1.73
UBE2D3-216ENST00000503742 KCNQ2O43526 872 aa25.85■■□□□ 1.73
UBE2D3-216ENST00000503742 HSP90AA1P07900 732 aaKnown RBP25.85■■□□□ 1.73
UBE2D3-216ENST00000503742 CCDC57Q2TAC2 916 aa25.85■■□□□ 1.73
UBE2D3-216ENST00000503742 ZNF831Q5JPB2 1677 aa25.85■■□□□ 1.73
UBE2D3-216ENST00000503742 KIAA1211Q6ZU35 1233 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms