RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 CEP350Q5VT06 3117 aa13.27□□□□□ -0.28
COPS4-202ENST00000503682 C3orf67Q6ZVT6 689 aa13.27□□□□□ -0.29
COPS4-202ENST00000503682 CNKSR1Q969H4 720 aa13.27□□□□□ -0.29
COPS4-202ENST00000503682 DDX21Q9NR30 783 aaKnown RBP eCLIP13.27□□□□□ -0.29
COPS4-202ENST00000503682 PDZRN3Q9UPQ7 1066 aa13.27□□□□□ -0.29
COPS4-202ENST00000503682 TAF1P21675 1872 aa13.26□□□□□ -0.29
COPS4-202ENST00000503682 LAMB2P55268 1798 aa13.26□□□□□ -0.29
COPS4-202ENST00000503682 RGL2O15211 777 aa13.26□□□□□ -0.29
COPS4-202ENST00000503682 NTSR2O95665 410 aa13.26□□□□□ -0.29
COPS4-202ENST00000503682 LMNB1P20700 586 aa13.26□□□□□ -0.29
COPS4-202ENST00000503682 POLA2Q14181 598 aa13.26□□□□□ -0.29
COPS4-202ENST00000503682 SYNE4Q8N205 404 aa13.26□□□□□ -0.29
COPS4-202ENST00000503682 KLRG2A4D1S0 409 aaPredicted RBP13.25□□□□□ -0.29
COPS4-202ENST00000503682 NPR1P16066 1061 aa13.25□□□□□ -0.29
COPS4-202ENST00000503682 C8orf58Q8NAV2 365 aa13.25□□□□□ -0.29
COPS4-202ENST00000503682 NYXQ9GZU5 481 aa13.25□□□□□ -0.29
COPS4-202ENST00000503682 RRAGCQ9HB90 399 aa13.25□□□□□ -0.29
COPS4-202ENST00000503682 TCERG1O14776 1098 aaKnown RBP13.25□□□□□ -0.29
COPS4-202ENST00000503682 C7orf43Q8WVR3 580 aa13.25□□□□□ -0.29
COPS4-202ENST00000503682 TSR2Q969E8 191 aaKnown RBP13.25□□□□□ -0.29
COPS4-202ENST00000503682 IFT57Q9NWB7 429 aa13.25□□□□□ -0.29
COPS4-202ENST00000503682 GNAI1P63096 354 aa13.24□□□□□ -0.29
COPS4-202ENST00000503682 TSPYL6Q8N831 410 aa13.24□□□□□ -0.29
COPS4-202ENST00000503682 PHAXQ9H814 394 aaKnown RBP13.24□□□□□ -0.29
COPS4-202ENST00000503682 TAOK3Q9H2K8 898 aa13.23□□□□□ -0.29
COPS4-202ENST00000503682 ATP5J2-PTCD1G3V325 749 aa13.22□□□□□ -0.29
COPS4-202ENST00000503682 HCLS1P14317 486 aaPredicted RBP13.22□□□□□ -0.29
COPS4-202ENST00000503682 TCIRG1Q13488 830 aa13.22□□□□□ -0.29
COPS4-202ENST00000503682 PPP1R42Q7Z4L9 355 aa13.22□□□□□ -0.29
COPS4-202ENST00000503682 NLRP10Q86W26 655 aa13.22□□□□□ -0.29
COPS4-202ENST00000503682 WWC1Q8IX03 1113 aa13.22□□□□□ -0.29
COPS4-202ENST00000503682 FAM9BQ8IZU0 186 aa13.22□□□□□ -0.29
COPS4-202ENST00000503682 UTP14AQ9BVJ6 771 aaKnown RBP13.22□□□□□ -0.29
COPS4-202ENST00000503682 DBF4Q9UBU7 674 aaPredicted RBP13.22□□□□□ -0.29
COPS4-202ENST00000503682 CRY2Q49AN0 593 aa13.22□□□□□ -0.29
COPS4-202ENST00000503682 RTL5Q5HYW3 569 aaPredicted RBP13.22□□□□□ -0.29
COPS4-202ENST00000503682 RPGRQ92834 1020 aaKnown RBP13.22□□□□□ -0.29
COPS4-202ENST00000503682 KDM2BQ8NHM5 1336 aa13.21□□□□□ -0.29
COPS4-202ENST00000503682 DDX60Q8IY21 1712 aaKnown RBP13.21□□□□□ -0.29
COPS4-202ENST00000503682 HOXB7P09629 217 aa13.21□□□□□ -0.3
COPS4-202ENST00000503682 PARP10Q53GL7 1025 aa13.21□□□□□ -0.3
COPS4-202ENST00000503682 CCDC93Q567U6 631 aa13.21□□□□□ -0.3
COPS4-202ENST00000503682 ANKRD13DQ6ZTN6 518 aa13.21□□□□□ -0.3
COPS4-202ENST00000503682 ZNF277Q9NRM2 450 aaPredicted RBP13.21□□□□□ -0.3
COPS4-202ENST00000503682 IBTKQ9P2D0 1353 aaPredicted RBP13.21□□□□□ -0.3
COPS4-202ENST00000503682 GLTPD2A6NH11 291 aa13.2□□□□□ -0.3
COPS4-202ENST00000503682 ALDH1B1P30837 517 aa13.2□□□□□ -0.3
COPS4-202ENST00000503682 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
COPS4-202ENST00000503682 PLBD2Q8NHP8 589 aa13.2□□□□□ -0.3
COPS4-202ENST00000503682 TRMT112Q9UI30 125 aaKnown RBP13.2□□□□□ -0.3
COPS4-202ENST00000503682 TOMM70O94826 608 aa13.19□□□□□ -0.3
COPS4-202ENST00000503682 HSP90AB3PQ58FF7 597 aa13.19□□□□□ -0.3
COPS4-202ENST00000503682 NLRP3Q96P20 1036 aa13.19□□□□□ -0.3
COPS4-202ENST00000503682 HYPKQ9NX55 129 aa13.19□□□□□ -0.3
COPS4-202ENST00000503682 LTBP3Q9NS15 1303 aa13.19□□□□□ -0.3
COPS4-202ENST00000503682 DDNO94850 711 aaPredicted RBP13.19□□□□□ -0.3
COPS4-202ENST00000503682 C16orf71Q8IYS4 520 aaPredicted RBP13.19□□□□□ -0.3
COPS4-202ENST00000503682 FAM89AQ96GI7 184 aa13.19□□□□□ -0.3
COPS4-202ENST00000503682 RIC1Q4ADV7 1423 aa13.18□□□□□ -0.3
COPS4-202ENST00000503682 POTECB2RU33 542 aa13.18□□□□□ -0.3
COPS4-202ENST00000503682 HSPA6P17066 643 aa13.18□□□□□ -0.3
COPS4-202ENST00000503682 HOXA10P31260 410 aaPredicted RBP13.18□□□□□ -0.3
COPS4-202ENST00000503682 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
COPS4-202ENST00000503682 FKBP4Q02790 459 aaKnown RBP eCLIP13.18□□□□□ -0.3
COPS4-202ENST00000503682 CCDC27Q2M243 656 aa13.18□□□□□ -0.3
COPS4-202ENST00000503682 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
COPS4-202ENST00000503682 SOGA3Q5TF21 947 aa13.18□□□□□ -0.3
COPS4-202ENST00000503682 RIC3Q7Z5B4 369 aa13.18□□□□□ -0.3
COPS4-202ENST00000503682 JARID2Q92833 1246 aaPredicted RBP13.18□□□□□ -0.3
COPS4-202ENST00000503682 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
COPS4-202ENST00000503682 ISCA1Q9BUE6 129 aa13.18□□□□□ -0.3
COPS4-202ENST00000503682 COL4A1P02462 1669 aa13.18□□□□□ -0.3
COPS4-202ENST00000503682 SNED1Q8TER0 1413 aa13.17□□□□□ -0.3
COPS4-202ENST00000503682 ABCB7O75027 752 aa13.17□□□□□ -0.3
COPS4-202ENST00000503682 COL4A5P29400 1685 aa13.17□□□□□ -0.3
COPS4-202ENST00000503682 ABCC4O15439 1325 aa13.17□□□□□ -0.3
COPS4-202ENST00000503682 SH3TC1Q8TE82 1336 aa13.17□□□□□ -0.3
COPS4-202ENST00000503682 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
COPS4-202ENST00000503682 PPEF1O14829 653 aaPredicted RBP13.16□□□□□ -0.3
COPS4-202ENST00000503682 MYD88Q99836 296 aa13.16□□□□□ -0.3
COPS4-202ENST00000503682 WDR90Q96KV7 1748 aa13.16□□□□□ -0.3
COPS4-202ENST00000503682 DSG3P32926 999 aa13.16□□□□□ -0.3
COPS4-202ENST00000503682 HTRA3P83110 453 aa13.16□□□□□ -0.3
COPS4-202ENST00000503682 DPY19L2Q6NUT2 758 aa13.16□□□□□ -0.3
COPS4-202ENST00000503682 G2E3Q7L622 706 aa13.16□□□□□ -0.3
COPS4-202ENST00000503682 RTKN2Q8IZC4 609 aa13.16□□□□□ -0.3
COPS4-202ENST00000503682 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
COPS4-202ENST00000503682 ZNF541Q9H0D2 1346 aa13.15□□□□□ -0.3
COPS4-202ENST00000503682 VEGFAP15692 232 aaPredicted RBP13.15□□□□□ -0.3
COPS4-202ENST00000503682 IARSP41252 1262 aaKnown RBP13.15□□□□□ -0.3
COPS4-202ENST00000503682 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
COPS4-202ENST00000503682 TWISTNBQ3B726 338 aaPredicted RBP13.15□□□□□ -0.3
COPS4-202ENST00000503682 CCDC30Q5VVM6 783 aa13.15□□□□□ -0.3
COPS4-202ENST00000503682 FANCIQ9NVI1 1328 aa13.14□□□□□ -0.31
COPS4-202ENST00000503682 MKRN4PQ13434 485 aaPredicted RBP13.14□□□□□ -0.31
COPS4-202ENST00000503682 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
COPS4-202ENST00000503682 POTEJP0CG39 1038 aa13.13□□□□□ -0.31
COPS4-202ENST00000503682 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
COPS4-202ENST00000503682 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
COPS4-202ENST00000503682 EXOSC9Q06265 439 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms