RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 PLA2G12BQ9BX93 195 aa10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 LRRCC1Q9C099 1032 aa10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 BICC1Q9H694 974 aaKnown RBP10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 TBC1D2BQ9UPU7 963 aa10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 NOP58Q9Y2X3 529 aaKnown RBP10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 GNPATO15228 680 aa10.06□□□□□ -0.8
TOPBP1-202ENST00000503338 ZPR1O75312 459 aa10.06□□□□□ -0.8
TOPBP1-202ENST00000503338 HLFQ16534 295 aa10.06□□□□□ -0.8
TOPBP1-202ENST00000503338 POTEAQ6S8J7 498 aa10.06□□□□□ -0.8
TOPBP1-202ENST00000503338 KIF1BPQ96EK5 621 aa10.06□□□□□ -0.8
TOPBP1-202ENST00000503338 NARFQ9UHQ1 456 aa10.06□□□□□ -0.8
TOPBP1-202ENST00000503338 AFDNP55196 1824 aaKnown RBP10.05□□□□□ -0.8
TOPBP1-202ENST00000503338 EIF5BO60841 1220 aaKnown RBP10.05□□□□□ -0.8
TOPBP1-202ENST00000503338 SURF6O75683 361 aaKnown RBP10.05□□□□□ -0.8
TOPBP1-202ENST00000503338 SSFA2P28290 1259 aa10.05□□□□□ -0.8
TOPBP1-202ENST00000503338 TRAPPC3LQ5T215 181 aa10.05□□□□□ -0.8
TOPBP1-202ENST00000503338 KAZALD1Q96I82 304 aa10.05□□□□□ -0.8
TOPBP1-202ENST00000503338 LNPKQ9C0E8 428 aa10.05□□□□□ -0.8
TOPBP1-202ENST00000503338 FBXO3Q9UK99 471 aa10.05□□□□□ -0.8
TOPBP1-202ENST00000503338 MYH14Q7Z406 1995 aaKnown RBP10.05□□□□□ -0.8
TOPBP1-202ENST00000503338 APBA3O96018 575 aa10.04□□□□□ -0.8
TOPBP1-202ENST00000503338 RFC4P35249 363 aa10.04□□□□□ -0.8
TOPBP1-202ENST00000503338 G3BP1Q13283 466 aaKnown RBP eCLIP10.04□□□□□ -0.8
TOPBP1-202ENST00000503338 OS9Q13438 667 aaPredicted RBP10.04□□□□□ -0.8
TOPBP1-202ENST00000503338 TXNRD1Q16881 649 aa10.04□□□□□ -0.8
TOPBP1-202ENST00000503338 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
TOPBP1-202ENST00000503338 UTP14AQ9BVJ6 771 aaKnown RBP10.04□□□□□ -0.8
TOPBP1-202ENST00000503338 NYXQ9GZU5 481 aa10.04□□□□□ -0.8
TOPBP1-202ENST00000503338 COPRSQ9NQ92 184 aa10.04□□□□□ -0.8
TOPBP1-202ENST00000503338 TRMT112Q9UI30 125 aaKnown RBP10.04□□□□□ -0.8
TOPBP1-202ENST00000503338 NIP7Q9Y221 180 aaKnown RBP eCLIP10.04□□□□□ -0.8
TOPBP1-202ENST00000503338 EXOC6BQ9Y2D4 811 aa10.04□□□□□ -0.8
TOPBP1-202ENST00000503338 SH3TC1Q8TE82 1336 aa10.04□□□□□ -0.8
TOPBP1-202ENST00000503338 PDE8AO60658 829 aa10.03□□□□□ -0.8
TOPBP1-202ENST00000503338 C4BP0C0L5 1744 aa10.03□□□□□ -0.8
TOPBP1-202ENST00000503338 GPTP24298 496 aa10.03□□□□□ -0.8
TOPBP1-202ENST00000503338 FOXO4P98177 505 aa10.03□□□□□ -0.8
TOPBP1-202ENST00000503338 LMBR1LQ6UX01 489 aa10.03□□□□□ -0.8
TOPBP1-202ENST00000503338 CLASRPQ8N2M8 674 aaKnown RBP10.03□□□□□ -0.8
TOPBP1-202ENST00000503338 FLAD1Q8NFF5 587 aa10.03□□□□□ -0.8
TOPBP1-202ENST00000503338 RHPN1Q8TCX5 695 aa10.03□□□□□ -0.8
TOPBP1-202ENST00000503338 LRRC4BQ9NT99 713 aa10.03□□□□□ -0.8
TOPBP1-202ENST00000503338 ANKRD36CQ5JPF3 1778 aa10.03□□□□□ -0.8
TOPBP1-202ENST00000503338 IRS4O14654 1257 aaPredicted RBP10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 CSF1RP07333 972 aa10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 PDE4AP27815 886 aa10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 KCNQ4P56696 695 aa10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 SF3B2Q13435 895 aaKnown RBP10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 CCDC57Q2TAC2 916 aa10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 BMP2KLQ5H9B9 411 aa10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 ARHGEF1Q92888 912 aaKnown RBP10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 FAM89AQ96GI7 184 aa10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 SETDB2Q96T68 719 aa10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 OSBPL3Q9H4L5 887 aa10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 NUP98P52948 1817 aa10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 TAF1LQ8IZX4 1826 aa10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 AOX1Q06278 1338 aa10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 UBN2Q6ZU65 1347 aa10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 USP42Q9H9J4 1324 aaKnown RBP10.02□□□□□ -0.81
TOPBP1-202ENST00000503338 RGPD3A6NKT7 1758 aaPredicted RBP10.01□□□□□ -0.81
TOPBP1-202ENST00000503338 BCORQ6W2J9 1755 aa10.01□□□□□ -0.81
TOPBP1-202ENST00000503338 RGPD4Q7Z3J3 1758 aa10.01□□□□□ -0.81
TOPBP1-202ENST00000503338 CIAO1O76071 339 aa10.01□□□□□ -0.81
TOPBP1-202ENST00000503338 RFX5P48382 616 aaPredicted RBP10.01□□□□□ -0.81
TOPBP1-202ENST00000503338 CTSWP56202 376 aa10.01□□□□□ -0.81
TOPBP1-202ENST00000503338 EPHA10Q5JZY3 1008 aa10.01□□□□□ -0.81
TOPBP1-202ENST00000503338 SUSD4Q5VX71 490 aa10.01□□□□□ -0.81
TOPBP1-202ENST00000503338 USPL1Q5W0Q7 1092 aa10.01□□□□□ -0.81
TOPBP1-202ENST00000503338 PLEKHM2Q8IWE5 1019 aa10.01□□□□□ -0.81
TOPBP1-202ENST00000503338 GPATCH3Q96I76 525 aa10.01□□□□□ -0.81
TOPBP1-202ENST00000503338 CHMP3Q9Y3E7 222 aa10.01□□□□□ -0.81
TOPBP1-202ENST00000503338 SCN7AQ01118 1682 aa10□□□□□ -0.81
TOPBP1-202ENST00000503338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10□□□□□ -0.81
TOPBP1-202ENST00000503338 APBB1O00213 710 aa10□□□□□ -0.81
TOPBP1-202ENST00000503338 NTSR2O95665 410 aa10□□□□□ -0.81
TOPBP1-202ENST00000503338 IL15P40933 162 aaPredicted RBP10□□□□□ -0.81
TOPBP1-202ENST00000503338 PTPN12Q05209 780 aaKnown RBP10□□□□□ -0.81
TOPBP1-202ENST00000503338 IFIT5Q13325 482 aaKnown RBP10□□□□□ -0.81
TOPBP1-202ENST00000503338 TAF7LQ5H9L4 462 aa10□□□□□ -0.81
TOPBP1-202ENST00000503338 TPTE2Q6XPS3 522 aa10□□□□□ -0.81
TOPBP1-202ENST00000503338 BACH2Q9BYV9 841 aa10□□□□□ -0.81
TOPBP1-202ENST00000503338 ANKRD18BA2A2Z9 1011 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 ERC2O15083 957 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 MX1P20591 662 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 GTF2E1P29083 439 aaPredicted RBP9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 BAG6P46379 1132 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 CCDC152Q4G0S7 254 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 RTL5Q5HYW3 569 aaPredicted RBP9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 SKAP1Q86WV1 359 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 CCDC125Q86Z20 511 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 PROM2Q8N271 834 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 TTLL11Q8NHH1 800 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 JARID2Q92833 1246 aaPredicted RBP9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 BCL2L12Q9HB09 334 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 GPR108Q9NPR9 543 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 STAP2Q9UGK3 403 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 PA2G4Q9UQ80 394 aaKnown RBP9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 TTC41PQ6P2S7 1318 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 RTL9Q8NET4 1388 aa9.99□□□□□ -0.81
TOPBP1-202ENST00000503338 EYA2O00167 538 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms