RNA–Protein interactions for RNA: ENST00000503282.1

UBE2D3-214, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-214ENST00000503282 ISCA1Q9BUE6 129 aa28.16■■■□□ 2.1
UBE2D3-214ENST00000503282 TRMT112Q9UI30 125 aaKnown RBP28.16■■■□□ 2.1
UBE2D3-214ENST00000503282 DLEC1Q9Y238 1755 aa28.15■■■□□ 2.1
UBE2D3-214ENST00000503282 KSR2Q6VAB6 950 aa28.15■■■□□ 2.1
UBE2D3-214ENST00000503282 G2E3Q7L622 706 aa28.15■■■□□ 2.1
UBE2D3-214ENST00000503282 CNKSR1Q969H4 720 aa28.15■■■□□ 2.1
UBE2D3-214ENST00000503282 RNF123Q5XPI4 1314 aa28.15■■■□□ 2.1
UBE2D3-214ENST00000503282 CHD4Q14839 1912 aa28.14■■■□□ 2.1
UBE2D3-214ENST00000503282 MYD88Q99836 296 aa28.14■■■□□ 2.1
UBE2D3-214ENST00000503282 MAP3K2Q9Y2U5 619 aa28.14■■■□□ 2.1
UBE2D3-214ENST00000503282 ABCC12Q96J65 1359 aa28.13■■■□□ 2.09
UBE2D3-214ENST00000503282 PI4KAP2A4QPH2 592 aa28.13■■■□□ 2.09
UBE2D3-214ENST00000503282 NPR1P16066 1061 aa28.13■■■□□ 2.09
UBE2D3-214ENST00000503282 TRIM28Q13263 835 aaKnown RBP28.13■■■□□ 2.09
UBE2D3-214ENST00000503282 PI4KAP1Q8N8J0 262 aa28.13■■■□□ 2.09
UBE2D3-214ENST00000503282 METTL22Q9BUU2 404 aaPredicted RBP28.13■■■□□ 2.09
UBE2D3-214ENST00000503282 ARFGEF2Q9Y6D5 1785 aa28.13■■■□□ 2.09
UBE2D3-214ENST00000503282 HNRNPUQ00839 825 aaKnown RBP eCLIP28.12■■■□□ 2.09
UBE2D3-214ENST00000503282 FLIIQ13045 1269 aa28.12■■■□□ 2.09
UBE2D3-214ENST00000503282 SLC10A5Q5PT55 438 aa28.12■■■□□ 2.09
UBE2D3-214ENST00000503282 ZNF428Q96B54 188 aa28.12■■■□□ 2.09
UBE2D3-214ENST00000503282 NLRP3Q96P20 1036 aa28.12■■■□□ 2.09
UBE2D3-214ENST00000503282 SH3TC1Q8TE82 1336 aa28.12■■■□□ 2.09
UBE2D3-214ENST00000503282 ARFGEF1Q9Y6D6 1849 aa28.11■■■□□ 2.09
UBE2D3-214ENST00000503282 TRMT2AQ8IZ69 625 aaKnown RBP28.11■■■□□ 2.09
UBE2D3-214ENST00000503282 COL11A2P13942 1736 aaPredicted RBP28.11■■■□□ 2.09
UBE2D3-214ENST00000503282 FKBP5Q13451 457 aaPredicted RBP28.1■■■□□ 2.09
UBE2D3-214ENST00000503282 CACNA1FO60840 1977 aa28.1■■■□□ 2.09
UBE2D3-214ENST00000503282 RIC1Q4ADV7 1423 aa28.09■■■□□ 2.09
UBE2D3-214ENST00000503282 ALDH1B1P30837 517 aa28.09■■■□□ 2.09
UBE2D3-214ENST00000503282 NEXNQ0ZGT2 675 aa28.09■■■□□ 2.09
UBE2D3-214ENST00000503282 CRY2Q49AN0 593 aa28.09■■■□□ 2.09
UBE2D3-214ENST00000503282 RPGRQ92834 1020 aaKnown RBP28.09■■■□□ 2.09
UBE2D3-214ENST00000503282 CCDC191Q8NCU4 936 aa28.08■■■□□ 2.09
UBE2D3-214ENST00000503282 ADCY9O60503 1353 aa28.08■■■□□ 2.09
UBE2D3-214ENST00000503282 PRPF40BQ6NWY9 871 aaKnown RBP28.07■■■□□ 2.08
UBE2D3-214ENST00000503282 SYNE4Q8N205 404 aa28.07■■■□□ 2.08
UBE2D3-214ENST00000503282 FAM89AQ96GI7 184 aa28.07■■■□□ 2.08
UBE2D3-214ENST00000503282 ZNF219Q9P2Y4 722 aaPredicted RBP28.07■■■□□ 2.08
UBE2D3-214ENST00000503282 C21orf2O43822 256 aa28.06■■■□□ 2.08
UBE2D3-214ENST00000503282 HCLS1P14317 486 aaPredicted RBP28.06■■■□□ 2.08
UBE2D3-214ENST00000503282 CWC25Q9NXE8 425 aaPredicted RBP28.06■■■□□ 2.08
UBE2D3-214ENST00000503282 RTL5Q5HYW3 569 aaPredicted RBP28.05■■■□□ 2.08
UBE2D3-214ENST00000503282 TNRC6CQ9HCJ0 1690 aaKnown RBP28.05■■■□□ 2.08
UBE2D3-214ENST00000503282 ZBTB38Q8NAP3 1195 aaPredicted RBP28.04■■■□□ 2.08
UBE2D3-214ENST00000503282 RBM17Q96I25 401 aaKnown RBP28.04■■■□□ 2.08
UBE2D3-214ENST00000503282 HOXA10P31260 410 aaPredicted RBP28.03■■■□□ 2.08
UBE2D3-214ENST00000503282 C3orf67Q6ZVT6 689 aa28.03■■■□□ 2.08
UBE2D3-214ENST00000503282 DNAAF4Q8WXU2 420 aa28.03■■■□□ 2.08
UBE2D3-214ENST00000503282 IGKV5-2P06315 115 aa28.02■■■□□ 2.08
UBE2D3-214ENST00000503282 SOGA3Q5TF21 947 aa28.02■■■□□ 2.08
UBE2D3-214ENST00000503282 SLX4Q8IY92 1834 aa28.02■■■□□ 2.08
UBE2D3-214ENST00000503282 IRS4O14654 1257 aaPredicted RBP28.01■■■□□ 2.07
UBE2D3-214ENST00000503282 HSP90B1P14625 803 aaKnown RBP28.01■■■□□ 2.07
UBE2D3-214ENST00000503282 CRAMP1Q96RY5 1269 aa28.01■■■□□ 2.07
UBE2D3-214ENST00000503282 CACNA1SQ13698 1873 aa28■■■□□ 2.07
UBE2D3-214ENST00000503282 PCCAP05165 728 aaPredicted RBP28■■■□□ 2.07
UBE2D3-214ENST00000503282 CT47B1P0C2W7 299 aaPredicted RBP28■■■□□ 2.07
UBE2D3-214ENST00000503282 NEURL1BA8MQ27 555 aa27.99■■■□□ 2.07
UBE2D3-214ENST00000503282 CWF19L2Q2TBE0 894 aaKnown RBP27.99■■■□□ 2.07
UBE2D3-214ENST00000503282 MRPL50Q8N5N7 158 aaKnown RBP27.99■■■□□ 2.07
UBE2D3-214ENST00000503282 SSH1Q8WYL5 1049 aa27.99■■■□□ 2.07
UBE2D3-214ENST00000503282 ALDH1L2Q3SY69 923 aa27.98■■■□□ 2.07
UBE2D3-214ENST00000503282 C7orf43Q8WVR3 580 aa27.98■■■□□ 2.07
UBE2D3-214ENST00000503282 F6X3S4 739 aa27.97■■■□□ 2.07
UBE2D3-214ENST00000503282 DDX46Q7L014 1031 aaKnown RBP27.97■■■□□ 2.07
UBE2D3-214ENST00000503282 LINS1Q8NG48 757 aa27.97■■■□□ 2.07
UBE2D3-214ENST00000503282 RASSF7Q02833 373 aa27.96■■■□□ 2.07
UBE2D3-214ENST00000503282 C9orf131Q5VYM1 1079 aa27.96■■■□□ 2.07
UBE2D3-214ENST00000503282 JARID2Q92833 1246 aaPredicted RBP27.96■■■□□ 2.07
UBE2D3-214ENST00000503282 SF3B3Q15393 1217 aaKnown RBP27.95■■■□□ 2.06
UBE2D3-214ENST00000503282 CCDC93Q567U6 631 aa27.95■■■□□ 2.06
UBE2D3-214ENST00000503282 BCL2L13Q9BXK5 485 aa27.95■■■□□ 2.06
UBE2D3-214ENST00000503282 NFKBIEO00221 500 aa27.94■■■□□ 2.06
UBE2D3-214ENST00000503282 GCKRQ14397 625 aa27.94■■■□□ 2.06
UBE2D3-214ENST00000503282 SMC4Q9NTJ3 1288 aa27.94■■■□□ 2.06
UBE2D3-214ENST00000503282 DDX60Q8IY21 1712 aaKnown RBP27.94■■■□□ 2.06
UBE2D3-214ENST00000503282 ZBED9Q6R2W3 1325 aa27.93■■■□□ 2.06
UBE2D3-214ENST00000503282 PDE8AO60658 829 aa27.93■■■□□ 2.06
UBE2D3-214ENST00000503282 LMNB1P20700 586 aa27.93■■■□□ 2.06
UBE2D3-214ENST00000503282 RTKN2Q8IZC4 609 aa27.93■■■□□ 2.06
UBE2D3-214ENST00000503282 ZNF784Q8NCA9 323 aaPredicted RBP27.93■■■□□ 2.06
UBE2D3-214ENST00000503282 TMX4Q9H1E5 349 aaPredicted RBP27.93■■■□□ 2.06
UBE2D3-214ENST00000503282 RNF181Q9P0P0 153 aa27.93■■■□□ 2.06
UBE2D3-214ENST00000503282 LAMB2P55268 1798 aa27.93■■■□□ 2.06
UBE2D3-214ENST00000503282 ABCC4O15439 1325 aa27.92■■■□□ 2.06
UBE2D3-214ENST00000503282 PTPRCP08575 1304 aa27.92■■■□□ 2.06
UBE2D3-214ENST00000503282 PPEF1O14829 653 aaPredicted RBP27.92■■■□□ 2.06
UBE2D3-214ENST00000503282 BBOX1O75936 387 aa27.92■■■□□ 2.06
UBE2D3-214ENST00000503282 CC2D2BQ6DHV5 1058 aa27.92■■■□□ 2.06
UBE2D3-214ENST00000503282 SLC4A10Q6U841 1118 aa27.92■■■□□ 2.06
UBE2D3-214ENST00000503282 TAOK3Q9H2K8 898 aa27.92■■■□□ 2.06
UBE2D3-214ENST00000503282 CDHR2Q9BYE9 1310 aa27.92■■■□□ 2.06
UBE2D3-214ENST00000503282 BEND3Q5T5X7 828 aa27.91■■■□□ 2.06
UBE2D3-214ENST00000503282 OLFM4Q6UX06 510 aa27.91■■■□□ 2.06
UBE2D3-214ENST00000503282 H7C1W4 665 aa27.9■■■□□ 2.06
UBE2D3-214ENST00000503282 GRAPQ13588 217 aa27.9■■■□□ 2.06
UBE2D3-214ENST00000503282 GRAPLQ8TC17 118 aaPredicted RBP27.9■■■□□ 2.06
UBE2D3-214ENST00000503282 LTBP3Q9NS15 1303 aa27.9■■■□□ 2.06
UBE2D3-214ENST00000503282 GRIPAP1Q4V328 841 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms