RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 GRNP28799 593 aaKnown RBP13.58□□□□□ -0.24
EXOSC9-203ENST00000503139 NIF3L1Q9GZT8 377 aa13.58□□□□□ -0.24
EXOSC9-203ENST00000503139 RPLP1P05386 114 aaKnown RBP13.57□□□□□ -0.24
EXOSC9-203ENST00000503139 NLRP8Q86W28 1048 aa13.57□□□□□ -0.24
EXOSC9-203ENST00000503139 USP20Q9Y2K6 914 aa13.57□□□□□ -0.24
EXOSC9-203ENST00000503139 A6NHS1 94 aa13.56□□□□□ -0.24
EXOSC9-203ENST00000503139 SOBPA7XYQ1 873 aa13.56□□□□□ -0.24
EXOSC9-203ENST00000503139 SAMD5Q5TGI4 173 aa13.56□□□□□ -0.24
EXOSC9-203ENST00000503139 GAS2L1Q99501 681 aaPredicted RBP13.56□□□□□ -0.24
EXOSC9-203ENST00000503139 RTCBQ9Y3I0 505 aaKnown RBP13.56□□□□□ -0.24
EXOSC9-203ENST00000503139 KCNMB2Q9Y691 235 aa13.56□□□□□ -0.24
EXOSC9-203ENST00000503139 THBS1P07996 1170 aa13.55□□□□□ -0.24
EXOSC9-203ENST00000503139 MAPK8P45983 427 aa13.55□□□□□ -0.24
EXOSC9-203ENST00000503139 TRIP4Q15650 581 aaPredicted RBP13.55□□□□□ -0.24
EXOSC9-203ENST00000503139 ENOX2Q16206 610 aaKnown RBP13.54□□□□□ -0.24
EXOSC9-203ENST00000503139 C8orf34Q49A92 452 aa13.54□□□□□ -0.24
EXOSC9-203ENST00000503139 PGBD3Q8N328 593 aa13.54□□□□□ -0.24
EXOSC9-203ENST00000503139 GJA3Q9Y6H8 435 aa13.54□□□□□ -0.24
EXOSC9-203ENST00000503139 LDHBP07195 334 aaKnown RBP13.53□□□□□ -0.24
EXOSC9-203ENST00000503139 PTSQ03393 145 aa13.53□□□□□ -0.24
EXOSC9-203ENST00000503139 CEP63Q96MT8 703 aa13.53□□□□□ -0.24
EXOSC9-203ENST00000503139 SLC35F4A4IF30 521 aa13.52□□□□□ -0.25
EXOSC9-203ENST00000503139 VAMP1P23763 118 aa13.52□□□□□ -0.25
EXOSC9-203ENST00000503139 LBRQ14739 615 aaKnown RBP13.52□□□□□ -0.25
EXOSC9-203ENST00000503139 XKR5Q6UX68 686 aa13.52□□□□□ -0.25
EXOSC9-203ENST00000503139 PRPF40AO75400 957 aaKnown RBP13.51□□□□□ -0.25
EXOSC9-203ENST00000503139 ORC1Q13415 861 aa13.51□□□□□ -0.25
EXOSC9-203ENST00000503139 UBAP2LQ14157 1087 aaKnown RBP13.51□□□□□ -0.25
EXOSC9-203ENST00000503139 IGSF5Q9NSI5 407 aa13.51□□□□□ -0.25
EXOSC9-203ENST00000503139 WWC3Q9ULE0 1092 aa13.51□□□□□ -0.25
EXOSC9-203ENST00000503139 EPB42P16452 691 aa13.5□□□□□ -0.25
EXOSC9-203ENST00000503139 EFHC2Q5JST6 749 aa13.5□□□□□ -0.25
EXOSC9-203ENST00000503139 CMTR1Q8N1G2 835 aaKnown RBP13.5□□□□□ -0.25
EXOSC9-203ENST00000503139 TTC16Q8NEE8 873 aa13.5□□□□□ -0.25
EXOSC9-203ENST00000503139 SETDB2Q96T68 719 aa13.5□□□□□ -0.25
EXOSC9-203ENST00000503139 PNMA6FA0A0J9YX94 578 aa13.49□□□□□ -0.25
EXOSC9-203ENST00000503139 PDE12Q6L8Q7 609 aaKnown RBP13.49□□□□□ -0.25
EXOSC9-203ENST00000503139 CSRNP1Q96S65 589 aa13.49□□□□□ -0.25
EXOSC9-203ENST00000503139 CFHR5Q9BXR6 569 aa13.49□□□□□ -0.25
EXOSC9-203ENST00000503139 ZCCHC2Q9C0B9 1178 aaKnown RBP13.49□□□□□ -0.25
EXOSC9-203ENST00000503139 SENP2Q9HC62 589 aa13.49□□□□□ -0.25
EXOSC9-203ENST00000503139 BRD7Q9NPI1 651 aa13.49□□□□□ -0.25
EXOSC9-203ENST00000503139 FNDC3AQ9Y2H6 1198 aaKnown RBP13.49□□□□□ -0.25
EXOSC9-203ENST00000503139 UBAP1LF5GYI3 381 aa13.48□□□□□ -0.25
EXOSC9-203ENST00000503139 FGD1P98174 961 aa13.48□□□□□ -0.25
EXOSC9-203ENST00000503139 KIFC2Q96AC6 838 aa13.48□□□□□ -0.25
EXOSC9-203ENST00000503139 C11orf16Q9NQ32 467 aa13.48□□□□□ -0.25
EXOSC9-203ENST00000503139 EIF1AYO14602 144 aaKnown RBP13.47□□□□□ -0.25
EXOSC9-203ENST00000503139 EFSO43281 561 aa13.47□□□□□ -0.25
EXOSC9-203ENST00000503139 TNFRSF21O75509 655 aa13.47□□□□□ -0.25
EXOSC9-203ENST00000503139 EGFRP00533 1210 aa13.47□□□□□ -0.25
EXOSC9-203ENST00000503139 FAM157BP0CG42 384 aa13.47□□□□□ -0.25
EXOSC9-203ENST00000503139 KCNQ4P56696 695 aa13.47□□□□□ -0.25
EXOSC9-203ENST00000503139 TRIM47Q96LD4 638 aa13.47□□□□□ -0.25
EXOSC9-203ENST00000503139 ATP2B2Q01814 1243 aa13.46□□□□□ -0.25
EXOSC9-203ENST00000503139 MRPL58Q14197 206 aaKnown RBP13.46□□□□□ -0.25
EXOSC9-203ENST00000503139 FIGNL1Q6PIW4 674 aa13.46□□□□□ -0.25
EXOSC9-203ENST00000503139 RIPOR1Q6ZS17 1223 aa13.46□□□□□ -0.25
EXOSC9-203ENST00000503139 ZNF438Q7Z4V0 828 aa13.46□□□□□ -0.25
EXOSC9-203ENST00000503139 DUSP9Q99956 384 aaKnown RBP13.46□□□□□ -0.25
EXOSC9-203ENST00000503139 DNAJC25Q9H1X3 360 aa13.46□□□□□ -0.25
EXOSC9-203ENST00000503139 RNF19AQ9NV58 838 aa13.46□□□□□ -0.25
EXOSC9-203ENST00000503139 CUEDC1Q9NWM3 386 aaPredicted RBP13.46□□□□□ -0.25
EXOSC9-203ENST00000503139 FOXD3Q9UJU5 478 aaPredicted RBP13.46□□□□□ -0.25
EXOSC9-203ENST00000503139 XYLBO75191 536 aa13.45□□□□□ -0.26
EXOSC9-203ENST00000503139 NEFLP07196 543 aa13.45□□□□□ -0.26
EXOSC9-203ENST00000503139 ALG1LQ6GMV1 187 aa13.45□□□□□ -0.26
EXOSC9-203ENST00000503139 CCDC155Q8N6L0 562 aa13.45□□□□□ -0.26
EXOSC9-203ENST00000503139 IRX2Q9BZI1 471 aaPredicted RBP13.45□□□□□ -0.26
EXOSC9-203ENST00000503139 NUCKS1Q9H1E3 243 aaKnown RBP13.45□□□□□ -0.26
EXOSC9-203ENST00000503139 TMEM63CQ9P1W3 806 aa13.45□□□□□ -0.26
EXOSC9-203ENST00000503139 PARP2Q9UGN5 583 aa13.45□□□□□ -0.26
EXOSC9-203ENST00000503139 ATXN7O15265 892 aaPredicted RBP13.44□□□□□ -0.26
EXOSC9-203ENST00000503139 DBN1Q16643 649 aa13.44□□□□□ -0.26
EXOSC9-203ENST00000503139 SNX29Q8TEQ0 813 aa13.44□□□□□ -0.26
EXOSC9-203ENST00000503139 ELP3Q9H9T3 547 aa13.44□□□□□ -0.26
EXOSC9-203ENST00000503139 PCDHGC4Q9Y5F7 938 aa13.44□□□□□ -0.26
EXOSC9-203ENST00000503139 RECKO95980 971 aa13.43□□□□□ -0.26
EXOSC9-203ENST00000503139 TRIM22Q8IYM9 498 aa13.43□□□□□ -0.26
EXOSC9-203ENST00000503139 FBF1Q8TES7 1133 aa13.43□□□□□ -0.26
EXOSC9-203ENST00000503139 NDFIP2Q9NV92 336 aa13.43□□□□□ -0.26
EXOSC9-203ENST00000503139 GMPR2Q9P2T1 348 aaKnown RBP13.43□□□□□ -0.26
EXOSC9-203ENST00000503139 HCN2Q9UL51 889 aa13.43□□□□□ -0.26
EXOSC9-203ENST00000503139 KCNH4Q9UQ05 1017 aa13.43□□□□□ -0.26
EXOSC9-203ENST00000503139 CPNE3O75131 537 aaKnown RBP13.42□□□□□ -0.26
EXOSC9-203ENST00000503139 SFSWAPQ12872 951 aaKnown RBP13.42□□□□□ -0.26
EXOSC9-203ENST00000503139 DCDC2BA2VCK2 349 aa13.41□□□□□ -0.26
EXOSC9-203ENST00000503139 H7C1W4 665 aa13.41□□□□□ -0.26
EXOSC9-203ENST00000503139 DAB2P98082 770 aa13.41□□□□□ -0.26
EXOSC9-203ENST00000503139 TNP2Q05952 138 aa13.41□□□□□ -0.26
EXOSC9-203ENST00000503139 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
EXOSC9-203ENST00000503139 FAM161BQ96MY7 647 aa13.41□□□□□ -0.26
EXOSC9-203ENST00000503139 XPCQ01831 940 aaPredicted RBP13.4□□□□□ -0.26
EXOSC9-203ENST00000503139 USPL1Q5W0Q7 1092 aa13.4□□□□□ -0.26
EXOSC9-203ENST00000503139 NLRP13Q86W25 1043 aa13.4□□□□□ -0.26
EXOSC9-203ENST00000503139 BCL11AQ9H165 835 aa13.4□□□□□ -0.26
EXOSC9-203ENST00000503139 CHRDQ9H2X0 955 aa13.4□□□□□ -0.26
EXOSC9-203ENST00000503139 LAMC2Q13753 1193 aa13.39□□□□□ -0.27
EXOSC9-203ENST00000503139 ZNF837Q96EG3 531 aaPredicted RBP13.39□□□□□ -0.27
EXOSC9-203ENST00000503139 ZFYVE28Q9HCC9 887 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms