RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 NGLY1Q96IV0 654 aa19.95■□□□□ 0.78
HMGXB3-201ENST00000502717 NEK1Q96PY6 1258 aa19.95■□□□□ 0.78
HMGXB3-201ENST00000502717 TCEAL9Q9UHQ7 104 aa19.95■□□□□ 0.78
HMGXB3-201ENST00000502717 UTP14CQ5TAP6 766 aaKnown RBP19.95■□□□□ 0.78
HMGXB3-201ENST00000502717 ARHGEF5Q12774 1597 aa19.95■□□□□ 0.78
HMGXB3-201ENST00000502717 BTBD11A6QL63 1104 aa19.94■□□□□ 0.78
HMGXB3-201ENST00000502717 CEBPAP49715 358 aaPredicted RBP19.94■□□□□ 0.78
HMGXB3-201ENST00000502717 HSP90AB3PQ58FF7 597 aa19.94■□□□□ 0.78
HMGXB3-201ENST00000502717 ZSCAN25Q6NSZ9 544 aa19.94■□□□□ 0.78
HMGXB3-201ENST00000502717 CCDC8Q9H0W5 538 aaPredicted RBP19.94■□□□□ 0.78
HMGXB3-201ENST00000502717 CEP131Q9UPN4 1083 aa19.94■□□□□ 0.78
HMGXB3-201ENST00000502717 USP19O94966 1318 aa19.94■□□□□ 0.78
HMGXB3-201ENST00000502717 SMARCC1Q92922 1105 aaPredicted RBP19.94■□□□□ 0.78
HMGXB3-201ENST00000502717 UHRF1BP1LA0JNW5 1464 aa19.94■□□□□ 0.78
HMGXB3-201ENST00000502717 RAD21O60216 631 aa19.93■□□□□ 0.78
HMGXB3-201ENST00000502717 ATP7AQ04656 1500 aa19.93■□□□□ 0.78
HMGXB3-201ENST00000502717 DMTNQ08495 405 aa19.93■□□□□ 0.78
HMGXB3-201ENST00000502717 KIAA1328Q86T90 577 aa19.93■□□□□ 0.78
HMGXB3-201ENST00000502717 ABCA8O94911 1581 aa19.93■□□□□ 0.78
HMGXB3-201ENST00000502717 ADGBQ8N7X0 1667 aa19.92■□□□□ 0.78
HMGXB3-201ENST00000502717 GIMAP7Q8NHV1 300 aa19.92■□□□□ 0.78
HMGXB3-201ENST00000502717 CCDC12Q8WUD4 166 aaPredicted RBP19.92■□□□□ 0.78
HMGXB3-201ENST00000502717 UBAP1LF5GYI3 381 aa19.92■□□□□ 0.78
HMGXB3-201ENST00000502717 AOPEPQ8N6M6 819 aa19.92■□□□□ 0.78
HMGXB3-201ENST00000502717 RBM8AQ9Y5S9 174 aaKnown RBP19.92■□□□□ 0.78
HMGXB3-201ENST00000502717 PIK3R4Q99570 1358 aa19.92■□□□□ 0.78
HMGXB3-201ENST00000502717 CNNM3Q8NE01 707 aa19.92■□□□□ 0.78
HMGXB3-201ENST00000502717 UBASH3AP57075 661 aa19.91■□□□□ 0.78
HMGXB3-201ENST00000502717 KIF6Q6ZMV9 814 aa19.91■□□□□ 0.78
HMGXB3-201ENST00000502717 CTR9Q6PD62 1173 aa19.91■□□□□ 0.78
HMGXB3-201ENST00000502717 GPT2Q8TD30 523 aa19.91■□□□□ 0.78
HMGXB3-201ENST00000502717 TRIM35Q9UPQ4 493 aa19.91■□□□□ 0.78
HMGXB3-201ENST00000502717 GADD45BO75293 160 aaPredicted RBP19.91■□□□□ 0.78
HMGXB3-201ENST00000502717 RRP12Q5JTH9 1297 aaKnown RBP19.91■□□□□ 0.78
HMGXB3-201ENST00000502717 MRPS27Q92552 414 aaKnown RBP19.91■□□□□ 0.78
HMGXB3-201ENST00000502717 TTC21BQ7Z4L5 1316 aa19.9■□□□□ 0.78
HMGXB3-201ENST00000502717 EPS15P42566 896 aa19.9■□□□□ 0.78
HMGXB3-201ENST00000502717 GTF2A1P52655 376 aaPredicted RBP19.9■□□□□ 0.78
HMGXB3-201ENST00000502717 CCT2P78371 535 aaKnown RBP19.9■□□□□ 0.78
HMGXB3-201ENST00000502717 FKBP4Q02790 459 aaKnown RBP eCLIP19.9■□□□□ 0.78
HMGXB3-201ENST00000502717 PHF8Q9UPP1 1060 aa19.9■□□□□ 0.78
HMGXB3-201ENST00000502717 MBD5Q9P267 1494 aa19.9■□□□□ 0.78
HMGXB3-201ENST00000502717 ERLIN2O94905 339 aa19.9■□□□□ 0.78
HMGXB3-201ENST00000502717 OTUD7AQ8TE49 926 aaPredicted RBP19.9■□□□□ 0.78
HMGXB3-201ENST00000502717 TUBB4BP68371 445 aa19.89■□□□□ 0.77
HMGXB3-201ENST00000502717 KCNG4Q8TDN1 519 aa19.89■□□□□ 0.77
HMGXB3-201ENST00000502717 TSC1Q92574 1164 aa19.89■□□□□ 0.77
HMGXB3-201ENST00000502717 SYT10Q6XYQ8 523 aa19.88■□□□□ 0.77
HMGXB3-201ENST00000502717 TMX1Q9H3N1 280 aa19.88■□□□□ 0.77
HMGXB3-201ENST00000502717 CEP126Q9P2H0 1117 aa19.88■□□□□ 0.77
HMGXB3-201ENST00000502717 GOLGA6L7A0A1B0GV03 622 aa19.88■□□□□ 0.77
HMGXB3-201ENST00000502717 ZNF75DP51815 510 aa19.88■□□□□ 0.77
HMGXB3-201ENST00000502717 RIMS2Q9UQ26 1411 aa19.88■□□□□ 0.77
HMGXB3-201ENST00000502717 LARP1Q6PKG0 1096 aaKnown RBP19.88■□□□□ 0.77
HMGXB3-201ENST00000502717 MICALCLQ6ZW33 695 aa19.88■□□□□ 0.77
HMGXB3-201ENST00000502717 NACAP1Q9BZK3 213 aa19.88■□□□□ 0.77
HMGXB3-201ENST00000502717 RASSF4Q9H2L5 321 aa19.87■□□□□ 0.77
HMGXB3-201ENST00000502717 TTC41PQ6P2S7 1318 aa19.87■□□□□ 0.77
HMGXB3-201ENST00000502717 EIF5P55010 431 aaKnown RBP19.87■□□□□ 0.77
HMGXB3-201ENST00000502717 STK11IPQ8N1F8 1099 aa19.87■□□□□ 0.77
HMGXB3-201ENST00000502717 POLKQ9UBT6 870 aa19.87■□□□□ 0.77
HMGXB3-201ENST00000502717 CCDC102BQ68D86 513 aa19.87■□□□□ 0.77
HMGXB3-201ENST00000502717 CENPHQ9H3R5 247 aa19.87■□□□□ 0.77
HMGXB3-201ENST00000502717 ZFYVE9O95405 1425 aa19.87■□□□□ 0.77
HMGXB3-201ENST00000502717 GOLGA1Q92805 767 aa19.87■□□□□ 0.77
HMGXB3-201ENST00000502717 DBF4Q9UBU7 674 aaPredicted RBP19.87■□□□□ 0.77
HMGXB3-201ENST00000502717 KDM6BO15054 1643 aa19.86■□□□□ 0.77
HMGXB3-201ENST00000502717 ACEP12821 1306 aa19.86■□□□□ 0.77
HMGXB3-201ENST00000502717 BRF1Q92994 677 aa19.86■□□□□ 0.77
HMGXB3-201ENST00000502717 ERBB4Q15303 1308 aa19.86■□□□□ 0.77
HMGXB3-201ENST00000502717 MYL6BP14649 208 aa19.86■□□□□ 0.77
HMGXB3-201ENST00000502717 CABP4P57796 275 aa19.86■□□□□ 0.77
HMGXB3-201ENST00000502717 ZSWIM4Q9H7M6 989 aa19.86■□□□□ 0.77
HMGXB3-201ENST00000502717 RUFY3Q7L099 469 aa19.86■□□□□ 0.77
HMGXB3-201ENST00000502717 KDM5DQ9BY66 1539 aa19.86■□□□□ 0.77
HMGXB3-201ENST00000502717 ODF2Q5BJF6 829 aa19.86■□□□□ 0.77
HMGXB3-201ENST00000502717 ADAMTS2O95450 1211 aa19.85■□□□□ 0.77
HMGXB3-201ENST00000502717 KLHL10Q6JEL2 608 aa19.85■□□□□ 0.77
HMGXB3-201ENST00000502717 CADPS2Q86UW7 1296 aa19.85■□□□□ 0.77
HMGXB3-201ENST00000502717 CPLX3Q8WVH0 158 aa19.85■□□□□ 0.77
HMGXB3-201ENST00000502717 GTF3C6Q969F1 213 aa19.85■□□□□ 0.77
HMGXB3-201ENST00000502717 RAI14Q9P0K7 980 aa19.85■□□□□ 0.77
HMGXB3-201ENST00000502717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.85■□□□□ 0.77
HMGXB3-201ENST00000502717 CAPN2P17655 700 aa19.85■□□□□ 0.77
HMGXB3-201ENST00000502717 MCM6Q14566 821 aa19.85■□□□□ 0.77
HMGXB3-201ENST00000502717 PKP1Q13835 747 aa19.85■□□□□ 0.77
HMGXB3-201ENST00000502717 KIF24Q5T7B8 1368 aa19.85■□□□□ 0.77
HMGXB3-201ENST00000502717 PHACTR3Q96KR7 559 aa19.85■□□□□ 0.77
HMGXB3-201ENST00000502717 CBX8Q9HC52 389 aa19.85■□□□□ 0.77
HMGXB3-201ENST00000502717 YEATS4O95619 227 aa19.84■□□□□ 0.77
HMGXB3-201ENST00000502717 GSPT1P15170 499 aaKnown RBP19.84■□□□□ 0.77
HMGXB3-201ENST00000502717 CEP112Q8N8E3 955 aa19.84■□□□□ 0.77
HMGXB3-201ENST00000502717 TCEANC2Q96MN5 208 aa19.84■□□□□ 0.77
HMGXB3-201ENST00000502717 CLSTN2Q9H4D0 955 aa19.84■□□□□ 0.77
HMGXB3-201ENST00000502717 ORC3Q9UBD5 711 aaPredicted RBP19.84■□□□□ 0.77
HMGXB3-201ENST00000502717 MAGI2Q86UL8 1455 aa19.84■□□□□ 0.77
HMGXB3-201ENST00000502717 GOLGA8BA8MQT2 603 aa19.84■□□□□ 0.77
HMGXB3-201ENST00000502717 SYKP43405 635 aa19.84■□□□□ 0.77
HMGXB3-201ENST00000502717 POLR3DP05423 398 aaPredicted RBP19.84■□□□□ 0.77
HMGXB3-201ENST00000502717 IRX3P78415 501 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms