RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-222ENST00000498801 RNF20Q5VTR2 975 aa10.34□□□□□ -0.75
GARNL3-222ENST00000498801 PUS7Q96PZ0 661 aaKnown RBP10.34□□□□□ -0.75
GARNL3-222ENST00000498801 DOLKQ9UPQ8 538 aa10.34□□□□□ -0.75
GARNL3-222ENST00000498801 POLR3AO14802 1390 aaPredicted RBP10.34□□□□□ -0.75
GARNL3-222ENST00000498801 USP47Q96K76 1375 aa10.34□□□□□ -0.75
GARNL3-222ENST00000498801 NPHP3Q7Z494 1330 aa10.33□□□□□ -0.76
GARNL3-222ENST00000498801 CARNS1A5YM72 827 aa10.33□□□□□ -0.76
GARNL3-222ENST00000498801 FAM196BA6NMK8 535 aa10.33□□□□□ -0.76
GARNL3-222ENST00000498801 ATP5J2-PTCD1G3V325 749 aa10.33□□□□□ -0.76
GARNL3-222ENST00000498801 VARSP26640 1264 aaKnown RBP10.33□□□□□ -0.76
GARNL3-222ENST00000498801 CRTC2Q53ET0 693 aaPredicted RBP10.33□□□□□ -0.76
GARNL3-222ENST00000498801 KCTD17Q8N5Z5 321 aa10.33□□□□□ -0.76
GARNL3-222ENST00000498801 TESK2Q96S53 571 aa10.33□□□□□ -0.76
GARNL3-222ENST00000498801 PODXL2Q9NZ53 605 aa10.33□□□□□ -0.76
GARNL3-222ENST00000498801 ZMIZ1Q9ULJ6 1067 aa10.33□□□□□ -0.76
GARNL3-222ENST00000498801 JCADQ9P266 1359 aa10.33□□□□□ -0.76
GARNL3-222ENST00000498801 SHPRHQ149N8 1683 aa10.33□□□□□ -0.76
GARNL3-222ENST00000498801 ATAD2Q6PL18 1390 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 TMEM88BA6NKF7 163 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 USP17L15C9J2P7 530 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 USP17L10C9JJH3 530 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 USP17L13C9JLJ4 530 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 USP17L12C9JPN9 530 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 USP17L11C9JVI0 530 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 USP17L21D6R901 530 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 USP17L18D6R9N7 530 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 USP17L22D6RA61 530 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 USP17L17D6RBQ6 530 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 USP17L19D6RCP7 530 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 USP17L20D6RJB6 530 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 USP17L24Q0WX57 530 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 SEPT12Q8IYM1 358 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 ORAI2Q96SN7 254 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 PHLPP1O60346 1717 aa10.32□□□□□ -0.76
GARNL3-222ENST00000498801 COL22A1Q8NFW1 1626 aaPredicted RBP10.32□□□□□ -0.76
GARNL3-222ENST00000498801 MED1Q15648 1581 aaPredicted RBP10.31□□□□□ -0.76
GARNL3-222ENST00000498801 SBNO1A3KN83 1393 aa10.31□□□□□ -0.76
GARNL3-222ENST00000498801 BRD4O60885 1362 aaPredicted RBP10.31□□□□□ -0.76
GARNL3-222ENST00000498801 NINLQ9Y2I6 1382 aa10.31□□□□□ -0.76
GARNL3-222ENST00000498801 ITSN1Q15811 1721 aa10.31□□□□□ -0.76
GARNL3-222ENST00000498801 ZBTB7CA1YPR0 619 aa10.31□□□□□ -0.76
GARNL3-222ENST00000498801 SAFB2Q14151 953 aaKnown RBP eCLIP10.31□□□□□ -0.76
GARNL3-222ENST00000498801 OXLD1Q5BKU9 147 aa10.31□□□□□ -0.76
GARNL3-222ENST00000498801 LIAT1Q6ZQX7 453 aa10.31□□□□□ -0.76
GARNL3-222ENST00000498801 AEBP1Q8IUX7 1158 aa10.31□□□□□ -0.76
GARNL3-222ENST00000498801 STK32AQ8WU08 396 aa10.31□□□□□ -0.76
GARNL3-222ENST00000498801 NOVA2Q9UNW9 492 aaKnown RBP10.31□□□□□ -0.76
GARNL3-222ENST00000498801 MAP4K5Q9Y4K4 846 aa10.31□□□□□ -0.76
GARNL3-222ENST00000498801 EVC2Q86UK5 1308 aa10.31□□□□□ -0.76
GARNL3-222ENST00000498801 PNPLA6Q8IY17 1366 aa10.3□□□□□ -0.76
GARNL3-222ENST00000498801 RASA1P20936 1047 aa10.3□□□□□ -0.76
GARNL3-222ENST00000498801 PTK7Q13308 1070 aa10.3□□□□□ -0.76
GARNL3-222ENST00000498801 IFFO2Q5TF58 517 aa10.3□□□□□ -0.76
GARNL3-222ENST00000498801 LARP1Q6PKG0 1096 aaKnown RBP10.3□□□□□ -0.76
GARNL3-222ENST00000498801 EHBP1Q8NDI1 1231 aa10.3□□□□□ -0.76
GARNL3-222ENST00000498801 EMID1Q96A84 441 aaPredicted RBP10.3□□□□□ -0.76
GARNL3-222ENST00000498801 KCTD15Q96SI1 283 aaPredicted RBP10.3□□□□□ -0.76
GARNL3-222ENST00000498801 HIRIP3Q9BW71 556 aaPredicted RBP10.3□□□□□ -0.76
GARNL3-222ENST00000498801 NOD1Q9Y239 953 aa10.3□□□□□ -0.76
GARNL3-222ENST00000498801 SPATA31A6Q5VVP1 1343 aa10.3□□□□□ -0.76
GARNL3-222ENST00000498801 ST20-MTHFSA0A0A6YYL1 179 aa10.29□□□□□ -0.76
GARNL3-222ENST00000498801 CD2BP2O95400 341 aaKnown RBP10.29□□□□□ -0.76
GARNL3-222ENST00000498801 HSPA5P11021 654 aaKnown RBP10.29□□□□□ -0.76
GARNL3-222ENST00000498801 ESCO1Q5FWF5 840 aa10.29□□□□□ -0.76
GARNL3-222ENST00000498801 RC3H1Q5TC82 1133 aaKnown RBP10.29□□□□□ -0.76
GARNL3-222ENST00000498801 TMEM164Q5U3C3 297 aa10.29□□□□□ -0.76
GARNL3-222ENST00000498801 VASH1Q7L8A9 365 aaPredicted RBP10.29□□□□□ -0.76
GARNL3-222ENST00000498801 CDCA7Q9BWT1 371 aaPredicted RBP10.29□□□□□ -0.76
GARNL3-222ENST00000498801 CDK19Q9BWU1 502 aa10.29□□□□□ -0.76
GARNL3-222ENST00000498801 PCDHB11Q9Y5F2 797 aa10.29□□□□□ -0.76
GARNL3-222ENST00000498801 TNS3Q68CZ2 1445 aa10.29□□□□□ -0.76
GARNL3-222ENST00000498801 TRPM3Q9HCF6 1732 aaPredicted RBP10.28□□□□□ -0.76
GARNL3-222ENST00000498801 CPSF1Q10570 1443 aaKnown RBP10.28□□□□□ -0.76
GARNL3-222ENST00000498801 PPIP5K1Q6PFW1 1433 aa10.28□□□□□ -0.76
GARNL3-222ENST00000498801 SSH2Q76I76 1423 aa10.28□□□□□ -0.76
GARNL3-222ENST00000498801 CLDN10P78369 228 aa10.28□□□□□ -0.76
GARNL3-222ENST00000498801 INTS6LQ5JSJ4 861 aaKnown RBP10.28□□□□□ -0.76
GARNL3-222ENST00000498801 TRIM50Q86XT4 487 aa10.28□□□□□ -0.76
GARNL3-222ENST00000498801 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
GARNL3-222ENST00000498801 NUDT16Q96DE0 195 aaKnown RBP10.28□□□□□ -0.76
GARNL3-222ENST00000498801 LRP6O75581 1613 aa10.27□□□□□ -0.77
GARNL3-222ENST00000498801 RAB15P59190 212 aa10.27□□□□□ -0.77
GARNL3-222ENST00000498801 CCDC125Q86Z20 511 aa10.27□□□□□ -0.77
GARNL3-222ENST00000498801 LRRC59Q96AG4 307 aaKnown RBP10.27□□□□□ -0.77
GARNL3-222ENST00000498801 TLL2Q9Y6L7 1015 aa10.27□□□□□ -0.77
GARNL3-222ENST00000498801 SPATA31A3Q5VYP0 1347 aa10.27□□□□□ -0.77
GARNL3-222ENST00000498801 ARHGEF10O15013 1369 aa10.26□□□□□ -0.77
GARNL3-222ENST00000498801 NRKQ7Z2Y5 1582 aa10.26□□□□□ -0.77
GARNL3-222ENST00000498801 USP6P35125 1406 aa10.26□□□□□ -0.77
GARNL3-222ENST00000498801 CD163L1Q9NR16 1453 aa10.26□□□□□ -0.77
GARNL3-222ENST00000498801 ATP1A2P50993 1020 aa10.26□□□□□ -0.77
GARNL3-222ENST00000498801 ZNF594Q96JF6 807 aaPredicted RBP10.26□□□□□ -0.77
GARNL3-222ENST00000498801 DNAAF2Q9NVR5 837 aaKnown RBP10.26□□□□□ -0.77
GARNL3-222ENST00000498801 ALS2Q96Q42 1657 aa10.25□□□□□ -0.77
GARNL3-222ENST00000498801 FOXO3O43524 673 aa10.25□□□□□ -0.77
GARNL3-222ENST00000498801 BRD1O95696 1058 aa10.25□□□□□ -0.77
GARNL3-222ENST00000498801 GTF2IP78347 998 aa10.25□□□□□ -0.77
GARNL3-222ENST00000498801 ARID5BQ14865 1188 aa10.25□□□□□ -0.77
GARNL3-222ENST00000498801 ANKMY2Q8IV38 441 aa10.25□□□□□ -0.77
GARNL3-222ENST00000498801 CDK15Q96Q40 435 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 195.9 ms